Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MIR548G-201ENST00000408442 89 ntBASIC0.5□□□□□ -2.33
LIN7CQ9NUP9 MIR5000-201ENST00000577717 103 ntBASIC0.5□□□□□ -2.33
LIN7CQ9NUP9 MIR4714-201ENST00000580728 77 ntBASIC0.5□□□□□ -2.33
LIN7CQ9NUP9 RNU6-90P-201ENST00000606352 106 ntBASIC0.5□□□□□ -2.33
LIN7CQ9NUP9 AL442128.1-201ENST00000615151 90 ntBASIC0.5□□□□□ -2.33
LIN7CQ9NUP9 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
LIN7CQ9NUP9 MIR6828-201ENST00000636181 60 ntBASIC0.5□□□□□ -2.33
LIN7CQ9NUP9 Y_RNA.342-201ENST00000365352 113 ntBASIC0.49□□□□□ -2.33
LIN7CQ9NUP9 MIR518E-201ENST00000385252 88 ntBASIC0.49□□□□□ -2.33
LIN7CQ9NUP9 RNU6-1168P-201ENST00000390831 104 ntBASIC0.49□□□□□ -2.33
LIN7CQ9NUP9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.49□□□□□ -2.33
LIN7CQ9NUP9 AC097635.1-201ENST00000450678 155 ntBASIC0.49□□□□□ -2.33
LIN7CQ9NUP9 RNU7-195P-201ENST00000458793 62 ntBASIC0.49□□□□□ -2.33
LIN7CQ9NUP9 RNU7-106P-201ENST00000459514 67 ntBASIC0.49□□□□□ -2.33
LIN7CQ9NUP9 AC091304.10-201ENST00000641554 121 ntBASIC0.49□□□□□ -2.33
LIN7CQ9NUP9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.48□□□□□ -2.33
LIN7CQ9NUP9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
LIN7CQ9NUP9 Y_RNA.221-201ENST00000364248 96 ntBASIC0.48□□□□□ -2.33
LIN7CQ9NUP9 U8.6-201ENST00000364939 135 ntBASIC0.48□□□□□ -2.33
LIN7CQ9NUP9 RNU6-880P-201ENST00000384526 107 ntBASIC0.48□□□□□ -2.33
LIN7CQ9NUP9 MIR577-201ENST00000385196 96 ntBASIC0.48□□□□□ -2.33
LIN7CQ9NUP9 AC098934.3-201ENST00000430450 190 ntBASIC0.48□□□□□ -2.33
LIN7CQ9NUP9 Y_RNA.809-201ENST00000516058 95 ntBASIC0.48□□□□□ -2.33
LIN7CQ9NUP9 MIR5009-201ENST00000578736 100 ntBASIC0.48□□□□□ -2.33
LIN7CQ9NUP9 MIR7107-201ENST00000611489 80 ntBASIC0.48□□□□□ -2.33
LIN7CQ9NUP9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.48□□□□□ -2.33
LIN7CQ9NUP9 Y_RNA.35-201ENST00000362601 101 ntBASIC0.47□□□□□ -2.33
LIN7CQ9NUP9 MIR516A2-201ENST00000384888 90 ntBASIC0.47□□□□□ -2.33
LIN7CQ9NUP9 MIR516A1-201ENST00000385033 90 ntBASIC0.47□□□□□ -2.33
LIN7CQ9NUP9 MIR519A1-201ENST00000385257 85 ntBASIC0.47□□□□□ -2.33
LIN7CQ9NUP9 RNU7-161P-201ENST00000517289 62 ntBASIC0.47□□□□□ -2.33
LIN7CQ9NUP9 MIR4694-201ENST00000578534 80 ntBASIC0.47□□□□□ -2.33
LIN7CQ9NUP9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
LIN7CQ9NUP9 RNA5SP205-201ENST00000364653 136 ntBASIC0.46□□□□□ -2.34
LIN7CQ9NUP9 Y_RNA.281-201ENST00000364774 94 ntBASIC0.46□□□□□ -2.34
LIN7CQ9NUP9 RNU6-716P-201ENST00000365621 103 ntBASIC0.46□□□□□ -2.34
LIN7CQ9NUP9 RNU6-42P-201ENST00000384165 107 ntBASIC0.46□□□□□ -2.34
LIN7CQ9NUP9 RNU6-1154P-201ENST00000391001 104 ntBASIC0.46□□□□□ -2.34
LIN7CQ9NUP9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.46□□□□□ -2.34
LIN7CQ9NUP9 RNU6-479P-201ENST00000516348 105 ntBASIC0.46□□□□□ -2.34
LIN7CQ9NUP9 MIR6734-201ENST00000621166 68 ntBASIC0.46□□□□□ -2.34
LIN7CQ9NUP9 MIRLET7D-201ENST00000362263 87 ntBASIC0.45□□□□□ -2.34
LIN7CQ9NUP9 RNA5SP347-201ENST00000362445 119 ntBASIC0.45□□□□□ -2.34
LIN7CQ9NUP9 Y_RNA.173-201ENST00000363776 113 ntBASIC0.45□□□□□ -2.34
LIN7CQ9NUP9 Y_RNA.377-201ENST00000365644 108 ntBASIC0.45□□□□□ -2.34
LIN7CQ9NUP9 RNU6-476P-201ENST00000384726 107 ntBASIC0.45□□□□□ -2.34
LIN7CQ9NUP9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.45□□□□□ -2.34
LIN7CQ9NUP9 RNU6-1064P-201ENST00000410626 104 ntBASIC0.45□□□□□ -2.34
LIN7CQ9NUP9 RNU4-61P-201ENST00000411243 107 ntBASIC0.45□□□□□ -2.34
LIN7CQ9NUP9 RNU7-104P-201ENST00000459398 79 ntBASIC0.45□□□□□ -2.34
LIN7CQ9NUP9 RNU6-313P-201ENST00000516317 112 ntBASIC0.45□□□□□ -2.34
LIN7CQ9NUP9 RNU6-789P-201ENST00000517105 102 ntBASIC0.45□□□□□ -2.34
LIN7CQ9NUP9 AC096720.1-201ENST00000604441 183 ntBASIC0.45□□□□□ -2.34
LIN7CQ9NUP9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.45□□□□□ -2.34
LIN7CQ9NUP9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
LIN7CQ9NUP9 RNU6-1260P-201ENST00000362944 107 ntBASIC0.44□□□□□ -2.34
LIN7CQ9NUP9 SNORD44.1-201ENST00000363202 61 ntBASIC0.44□□□□□ -2.34
LIN7CQ9NUP9 RNU6-832P-201ENST00000363319 107 ntBASIC0.44□□□□□ -2.34
LIN7CQ9NUP9 RNA5SP403-201ENST00000363598 108 ntBASIC0.44□□□□□ -2.34
LIN7CQ9NUP9 SNORD113-1-201ENST00000365321 69 ntBASIC0.44□□□□□ -2.34
LIN7CQ9NUP9 RNU6-1144P-201ENST00000384247 104 ntBASIC0.44□□□□□ -2.34
LIN7CQ9NUP9 MIR548L-201ENST00000408303 86 ntBASIC0.44□□□□□ -2.34
LIN7CQ9NUP9 AL606753.1-201ENST00000427435 87 ntBASIC0.44□□□□□ -2.34
LIN7CQ9NUP9 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.44□□□□□ -2.34
LIN7CQ9NUP9 RNU6-412P-201ENST00000516434 106 ntBASIC0.44□□□□□ -2.34
LIN7CQ9NUP9 Y_RNA.57-201ENST00000362806 113 ntBASIC0.43□□□□□ -2.34
LIN7CQ9NUP9 RNY3P2-201ENST00000362918 102 ntBASIC0.43□□□□□ -2.34
LIN7CQ9NUP9 RNU6-524P-201ENST00000384270 107 ntBASIC0.43□□□□□ -2.34
LIN7CQ9NUP9 AC069271.1-201ENST00000445577 156 ntBASIC0.43□□□□□ -2.34
LIN7CQ9NUP9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.43□□□□□ -2.34
LIN7CQ9NUP9 AC067863.3-201ENST00000624172 122 ntBASIC0.43□□□□□ -2.34
LIN7CQ9NUP9 MIR103A1-201ENST00000362165 78 ntBASIC0.42□□□□□ -2.34
LIN7CQ9NUP9 RNU6-1099P-201ENST00000363533 107 ntBASIC0.42□□□□□ -2.34
LIN7CQ9NUP9 RNU6-726P-201ENST00000364680 107 ntBASIC0.42□□□□□ -2.34
LIN7CQ9NUP9 Y_RNA.323-201ENST00000365157 109 ntBASIC0.42□□□□□ -2.34
LIN7CQ9NUP9 RNU2-59P-201ENST00000410482 191 ntBASIC0.42□□□□□ -2.34
LIN7CQ9NUP9 RNU6-1107P-201ENST00000364817 104 ntBASIC0.41□□□□□ -2.34
LIN7CQ9NUP9 RNU6-1014P-201ENST00000383940 103 ntBASIC0.41□□□□□ -2.34
LIN7CQ9NUP9 RNU6-1254P-201ENST00000391266 104 ntBASIC0.41□□□□□ -2.34
LIN7CQ9NUP9 RNU2-51P-201ENST00000410708 197 ntBASIC0.41□□□□□ -2.34
LIN7CQ9NUP9 Y_RNA.659-201ENST00000515994 113 ntBASIC0.41□□□□□ -2.34
LIN7CQ9NUP9 AC141557.1-201ENST00000540982 400 ntBASIC0.41□□□□□ -2.34
LIN7CQ9NUP9 AC022709.1-201ENST00000615967 87 ntBASIC0.41□□□□□ -2.34
LIN7CQ9NUP9 MIR6129-201ENST00000616087 109 ntBASIC0.41□□□□□ -2.34
LIN7CQ9NUP9 MIR6513-201ENST00000621188 64 ntBASIC0.41□□□□□ -2.34
LIN7CQ9NUP9 RNU6-1056P-201ENST00000383996 107 ntBASIC0.4□□□□□ -2.35
LIN7CQ9NUP9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.4□□□□□ -2.35
LIN7CQ9NUP9 AL157398.1-201ENST00000452981 186 ntBASIC0.4□□□□□ -2.35
LIN7CQ9NUP9 MIR3613-201ENST00000579844 87 ntBASIC0.4□□□□□ -2.35
LIN7CQ9NUP9 RNU6-1163P-201ENST00000364516 107 ntBASIC0.39□□□□□ -2.35
LIN7CQ9NUP9 RNU6-1126P-201ENST00000384002 107 ntBASIC0.39□□□□□ -2.35
LIN7CQ9NUP9 MIR216A-201ENST00000385063 110 ntBASIC0.39□□□□□ -2.35
LIN7CQ9NUP9 RNU6-243P-201ENST00000391140 107 ntBASIC0.39□□□□□ -2.35
LIN7CQ9NUP9 snoU13.18-201ENST00000459483 104 ntBASIC0.39□□□□□ -2.35
LIN7CQ9NUP9 RNU6-834P-201ENST00000362367 110 ntBASIC0.38□□□□□ -2.35
LIN7CQ9NUP9 SNORD36A-201ENST00000362874 73 ntBASIC0.38□□□□□ -2.35
LIN7CQ9NUP9 Y_RNA.163-201ENST00000363702 113 ntBASIC0.38□□□□□ -2.35
LIN7CQ9NUP9 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
LIN7CQ9NUP9 AC109327.2-201ENST00000448339 378 ntBASIC0.38□□□□□ -2.35
LIN7CQ9NUP9 RNU6-406P-201ENST00000516470 107 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms