Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 AC084368.1-201ENST00000620935 65 ntBASIC-0.28□□□□□ -2.45
ZCCHC3Q9NUD5 AL162726.3-218ENST00000636401 95 ntBASIC-0.28□□□□□ -2.45
ZCCHC3Q9NUD5 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.28□□□□□ -2.45
ZCCHC3Q9NUD5 RNU6-170P-201ENST00000362832 104 ntBASIC-0.29□□□□□ -2.46
ZCCHC3Q9NUD5 RNU6-509P-201ENST00000363519 107 ntBASIC-0.29□□□□□ -2.46
ZCCHC3Q9NUD5 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.29□□□□□ -2.46
ZCCHC3Q9NUD5 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.29□□□□□ -2.46
ZCCHC3Q9NUD5 RNU6-480P-201ENST00000384332 107 ntBASIC-0.29□□□□□ -2.46
ZCCHC3Q9NUD5 MIR7-2-201ENST00000384970 110 ntBASIC-0.29□□□□□ -2.46
ZCCHC3Q9NUD5 MIR516B1-201ENST00000385211 90 ntBASIC-0.29□□□□□ -2.46
ZCCHC3Q9NUD5 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
ZCCHC3Q9NUD5 SNORD63B-201ENST00000411005 70 ntBASIC-0.29□□□□□ -2.46
ZCCHC3Q9NUD5 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.29□□□□□ -2.46
ZCCHC3Q9NUD5 AC114755.3-201ENST00000481111 251 ntBASIC-0.29□□□□□ -2.46
ZCCHC3Q9NUD5 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.29□□□□□ -2.46
ZCCHC3Q9NUD5 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.29□□□□□ -2.46
ZCCHC3Q9NUD5 RNA5SP169-201ENST00000517268 117 ntBASIC-0.29□□□□□ -2.46
ZCCHC3Q9NUD5 MIR3920-201ENST00000581751 86 ntBASIC-0.29□□□□□ -2.46
ZCCHC3Q9NUD5 MIR4436A-201ENST00000585278 85 ntBASIC-0.29□□□□□ -2.46
ZCCHC3Q9NUD5 MIR8064-201ENST00000612863 90 ntBASIC-0.29□□□□□ -2.46
ZCCHC3Q9NUD5 MIR376B-201ENST00000614515 100 ntBASIC-0.29□□□□□ -2.46
ZCCHC3Q9NUD5 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.3□□□□□ -2.46
ZCCHC3Q9NUD5 RNU7-195P-201ENST00000458793 62 ntBASIC-0.3□□□□□ -2.46
ZCCHC3Q9NUD5 RNU6-175P-201ENST00000516896 107 ntBASIC-0.3□□□□□ -2.46
ZCCHC3Q9NUD5 RNU7-188P-201ENST00000517063 64 ntBASIC-0.3□□□□□ -2.46
ZCCHC3Q9NUD5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.3□□□□□ -2.46
ZCCHC3Q9NUD5 MIR548AG2-201ENST00000581228 64 ntBASIC-0.3□□□□□ -2.46
ZCCHC3Q9NUD5 MIR548AE1-201ENST00000583292 70 ntBASIC-0.3□□□□□ -2.46
ZCCHC3Q9NUD5 AC108081.1-201ENST00000604358 221 ntBASIC-0.3□□□□□ -2.46
ZCCHC3Q9NUD5 MIR548AZ-201ENST00000616567 95 ntBASIC-0.3□□□□□ -2.46
ZCCHC3Q9NUD5 FTX_2.1-201ENST00000618816 94 ntBASIC-0.3□□□□□ -2.46
ZCCHC3Q9NUD5 AL391099.1-201ENST00000624635 187 ntBASIC-0.3□□□□□ -2.46
ZCCHC3Q9NUD5 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.31□□□□□ -2.46
ZCCHC3Q9NUD5 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.31□□□□□ -2.46
ZCCHC3Q9NUD5 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.31□□□□□ -2.46
ZCCHC3Q9NUD5 RNU6-571P-201ENST00000384128 107 ntBASIC-0.31□□□□□ -2.46
ZCCHC3Q9NUD5 MIR4473-201ENST00000583731 91 ntBASIC-0.31□□□□□ -2.46
ZCCHC3Q9NUD5 uc_338.36-201ENST00000622331 158 ntBASIC-0.31□□□□□ -2.46
ZCCHC3Q9NUD5 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.32□□□□□ -2.46
ZCCHC3Q9NUD5 RNU1-141P-201ENST00000364623 158 ntBASIC-0.32□□□□□ -2.46
ZCCHC3Q9NUD5 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.32□□□□□ -2.46
ZCCHC3Q9NUD5 MIR539-201ENST00000365690 78 ntBASIC-0.32□□□□□ -2.46
ZCCHC3Q9NUD5 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.32□□□□□ -2.46
ZCCHC3Q9NUD5 SNORA32.3-201ENST00000384772 121 ntBASIC-0.32□□□□□ -2.46
ZCCHC3Q9NUD5 AC093423.1-201ENST00000440817 142 ntBASIC-0.32□□□□□ -2.46
ZCCHC3Q9NUD5 RPS29P8-201ENST00000445109 171 ntBASIC-0.32□□□□□ -2.46
ZCCHC3Q9NUD5 RNU7-13P-201ENST00000516413 62 ntBASIC-0.32□□□□□ -2.46
ZCCHC3Q9NUD5 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.33□□□□□ -2.46
ZCCHC3Q9NUD5 RNU6-574P-201ENST00000384265 107 ntBASIC-0.33□□□□□ -2.46
ZCCHC3Q9NUD5 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.33□□□□□ -2.46
ZCCHC3Q9NUD5 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.33□□□□□ -2.46
ZCCHC3Q9NUD5 MIR9-2-201ENST00000384838 87 ntBASIC-0.33□□□□□ -2.46
ZCCHC3Q9NUD5 RNU7-74P-201ENST00000459104 62 ntBASIC-0.33□□□□□ -2.46
ZCCHC3Q9NUD5 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.33□□□□□ -2.46
ZCCHC3Q9NUD5 MTND5P40-201ENST00000559945 246 ntBASIC-0.33□□□□□ -2.46
ZCCHC3Q9NUD5 MIR4263-201ENST00000584745 83 ntBASIC-0.33□□□□□ -2.46
ZCCHC3Q9NUD5 SNORD114-14-201ENST00000362723 75 ntBASIC-0.34□□□□□ -2.46
ZCCHC3Q9NUD5 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.34□□□□□ -2.46
ZCCHC3Q9NUD5 RNU6-455P-201ENST00000384681 107 ntBASIC-0.34□□□□□ -2.46
ZCCHC3Q9NUD5 SNORD56B-201ENST00000384713 71 ntBASIC-0.34□□□□□ -2.46
ZCCHC3Q9NUD5 MIR181B2-201ENST00000385004 89 ntBASIC-0.34□□□□□ -2.46
ZCCHC3Q9NUD5 MIR329-2-201ENST00000385029 84 ntBASIC-0.34□□□□□ -2.46
ZCCHC3Q9NUD5 MIR519E-201ENST00000385075 84 ntBASIC-0.34□□□□□ -2.46
ZCCHC3Q9NUD5 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.34□□□□□ -2.46
ZCCHC3Q9NUD5 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.34□□□□□ -2.46
ZCCHC3Q9NUD5 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.34□□□□□ -2.46
ZCCHC3Q9NUD5 AP002392.1-201ENST00000537692 208 ntBASIC-0.34□□□□□ -2.46
ZCCHC3Q9NUD5 AC087741.2-201ENST00000619415 172 ntBASIC-0.34□□□□□ -2.46
ZCCHC3Q9NUD5 RNA5SP257-201ENST00000363023 116 ntBASIC-0.35□□□□□ -2.47
ZCCHC3Q9NUD5 RNA5SP98-201ENST00000363158 137 ntBASIC-0.35□□□□□ -2.47
ZCCHC3Q9NUD5 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.35□□□□□ -2.47
ZCCHC3Q9NUD5 RNU6-524P-201ENST00000384270 107 ntBASIC-0.35□□□□□ -2.47
ZCCHC3Q9NUD5 SNORA49-201ENST00000386157 136 ntBASIC-0.35□□□□□ -2.47
ZCCHC3Q9NUD5 SNORA3B-201ENST00000391305 131 ntBASIC-0.35□□□□□ -2.47
ZCCHC3Q9NUD5 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.35□□□□□ -2.47
ZCCHC3Q9NUD5 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.35□□□□□ -2.47
ZCCHC3Q9NUD5 RNA5SP66-201ENST00000517178 101 ntBASIC-0.35□□□□□ -2.47
ZCCHC3Q9NUD5 YWHAEP2-201ENST00000580066 112 ntBASIC-0.35□□□□□ -2.47
ZCCHC3Q9NUD5 AC145423.2-201ENST00000610631 239 ntBASIC-0.35□□□□□ -2.47
ZCCHC3Q9NUD5 AC141273.2-201ENST00000618989 130 ntBASIC-0.35□□□□□ -2.47
ZCCHC3Q9NUD5 SNORD114-28-201ENST00000363610 72 ntBASIC-0.36□□□□□ -2.47
ZCCHC3Q9NUD5 RNU6-463P-201ENST00000384340 107 ntBASIC-0.36□□□□□ -2.47
ZCCHC3Q9NUD5 MIR34C-201ENST00000384831 77 ntBASIC-0.36□□□□□ -2.47
ZCCHC3Q9NUD5 SNORD75.1-201ENST00000408373 60 ntBASIC-0.36□□□□□ -2.47
ZCCHC3Q9NUD5 RNU7-106P-201ENST00000459514 67 ntBASIC-0.36□□□□□ -2.47
ZCCHC3Q9NUD5 RNU6-850P-201ENST00000516934 103 ntBASIC-0.36□□□□□ -2.47
ZCCHC3Q9NUD5 MIR4280-201ENST00000582178 76 ntBASIC-0.36□□□□□ -2.47
ZCCHC3Q9NUD5 AC069503.3-201ENST00000618674 145 ntBASIC-0.36□□□□□ -2.47
ZCCHC3Q9NUD5 SNORD114-31-201ENST00000363219 75 ntBASIC-0.37□□□□□ -2.47
ZCCHC3Q9NUD5 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.37□□□□□ -2.47
ZCCHC3Q9NUD5 RNU6-154P-201ENST00000384306 106 ntBASIC-0.37□□□□□ -2.47
ZCCHC3Q9NUD5 AL445193.1-201ENST00000441183 141 ntBASIC-0.37□□□□□ -2.47
ZCCHC3Q9NUD5 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.37□□□□□ -2.47
ZCCHC3Q9NUD5 RNU7-6P-201ENST00000516845 62 ntBASIC-0.37□□□□□ -2.47
ZCCHC3Q9NUD5 IGLVI-20-201ENST00000519296 130 ntBASIC-0.37□□□□□ -2.47
ZCCHC3Q9NUD5 MIR3121-201ENST00000579680 77 ntBASIC-0.37□□□□□ -2.47
ZCCHC3Q9NUD5 MIR4645-201ENST00000583158 77 ntBASIC-0.37□□□□□ -2.47
ZCCHC3Q9NUD5 RNU6-86P-201ENST00000606534 107 ntBASIC-0.37□□□□□ -2.47
ZCCHC3Q9NUD5 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.38□□□□□ -2.47
ZCCHC3Q9NUD5 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms