Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RNU6-170P-201ENST00000362832 104 ntBASIC0.33□□□□□ -2.36
SLC6A13Q9NSD5 RNU6-363P-201ENST00000362895 105 ntBASIC0.33□□□□□ -2.36
SLC6A13Q9NSD5 Y_RNA.115-201ENST00000363272 98 ntBASIC0.33□□□□□ -2.36
SLC6A13Q9NSD5 Y_RNA.258-201ENST00000364613 105 ntBASIC0.33□□□□□ -2.36
SLC6A13Q9NSD5 Y_RNA.344-201ENST00000365381 112 ntBASIC0.33□□□□□ -2.36
SLC6A13Q9NSD5 MIR8087-201ENST00000612745 78 ntBASIC0.33□□□□□ -2.36
SLC6A13Q9NSD5 MIR330-201ENST00000362196 94 ntBASIC0.32□□□□□ -2.36
SLC6A13Q9NSD5 RNU6-774P-201ENST00000363238 107 ntBASIC0.32□□□□□ -2.36
SLC6A13Q9NSD5 RNU6-1126P-201ENST00000384002 107 ntBASIC0.32□□□□□ -2.36
SLC6A13Q9NSD5 Y_RNA.507-201ENST00000384500 99 ntBASIC0.32□□□□□ -2.36
SLC6A13Q9NSD5 MIR599-201ENST00000385069 95 ntBASIC0.32□□□□□ -2.36
SLC6A13Q9NSD5 SNORA7.5-201ENST00000410672 110 ntBASIC0.32□□□□□ -2.36
SLC6A13Q9NSD5 RNU7-107P-201ENST00000459121 61 ntBASIC0.32□□□□□ -2.36
SLC6A13Q9NSD5 RNU7-161P-201ENST00000517289 62 ntBASIC0.32□□□□□ -2.36
SLC6A13Q9NSD5 RNU6-1313P-201ENST00000362622 102 ntBASIC0.31□□□□□ -2.36
SLC6A13Q9NSD5 RNA5SP403-201ENST00000363598 108 ntBASIC0.31□□□□□ -2.36
SLC6A13Q9NSD5 RNU6-704P-201ENST00000364162 103 ntBASIC0.31□□□□□ -2.36
SLC6A13Q9NSD5 RNU6-716P-201ENST00000365621 103 ntBASIC0.31□□□□□ -2.36
SLC6A13Q9NSD5 SNORD63B-201ENST00000411005 70 ntBASIC0.31□□□□□ -2.36
SLC6A13Q9NSD5 RNU6-1018P-201ENST00000516577 106 ntBASIC0.31□□□□□ -2.36
SLC6A13Q9NSD5 Y_RNA.712-201ENST00000517011 92 ntBASIC0.31□□□□□ -2.36
SLC6A13Q9NSD5 RNA5SP457-201ENST00000363657 124 ntBASIC0.3□□□□□ -2.36
SLC6A13Q9NSD5 Y_RNA.362-201ENST00000365518 110 ntBASIC0.3□□□□□ -2.36
SLC6A13Q9NSD5 RNU6-409P-201ENST00000384114 104 ntBASIC0.3□□□□□ -2.36
SLC6A13Q9NSD5 AC069271.1-201ENST00000445577 156 ntBASIC0.3□□□□□ -2.36
SLC6A13Q9NSD5 AC108740.1-201ENST00000498629 225 ntBASIC0.3□□□□□ -2.36
SLC6A13Q9NSD5 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
SLC6A13Q9NSD5 RNU6-850P-201ENST00000516934 103 ntBASIC0.3□□□□□ -2.36
SLC6A13Q9NSD5 MIR3914-2-201ENST00000637339 95 ntBASIC0.3□□□□□ -2.36
SLC6A13Q9NSD5 AL512310.12-203ENST00000640543 90 ntBASIC0.3□□□□□ -2.36
SLC6A13Q9NSD5 Y_RNA.30-201ENST00000362572 97 ntBASIC0.29□□□□□ -2.36
SLC6A13Q9NSD5 Y_RNA.155-201ENST00000363632 101 ntBASIC0.29□□□□□ -2.36
SLC6A13Q9NSD5 Y_RNA.218-201ENST00000364218 104 ntBASIC0.29□□□□□ -2.36
SLC6A13Q9NSD5 RNU6-726P-201ENST00000364680 107 ntBASIC0.29□□□□□ -2.36
SLC6A13Q9NSD5 Y_RNA.342-201ENST00000365352 113 ntBASIC0.29□□□□□ -2.36
SLC6A13Q9NSD5 MIR548L-201ENST00000408303 86 ntBASIC0.29□□□□□ -2.36
SLC6A13Q9NSD5 MIR1197-201ENST00000408818 88 ntBASIC0.29□□□□□ -2.36
SLC6A13Q9NSD5 MIR1912-201ENST00000410389 80 ntBASIC0.29□□□□□ -2.36
SLC6A13Q9NSD5 AL353813.1-201ENST00000440700 253 ntBASIC0.29□□□□□ -2.36
SLC6A13Q9NSD5 RNU7-104P-201ENST00000459398 79 ntBASIC0.29□□□□□ -2.36
SLC6A13Q9NSD5 AL162726.3-218ENST00000636401 95 ntBASIC0.29□□□□□ -2.36
SLC6A13Q9NSD5 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.29□□□□□ -2.36
SLC6A13Q9NSD5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
SLC6A13Q9NSD5 Y_RNA.85-201ENST00000363014 111 ntBASIC0.28□□□□□ -2.36
SLC6A13Q9NSD5 RNA5SP62-201ENST00000363457 110 ntBASIC0.28□□□□□ -2.36
SLC6A13Q9NSD5 Y_RNA.525-201ENST00000384570 113 ntBASIC0.28□□□□□ -2.36
SLC6A13Q9NSD5 RNU7-195P-201ENST00000458793 62 ntBASIC0.28□□□□□ -2.36
SLC6A13Q9NSD5 RPL39P34-201ENST00000477141 156 ntBASIC0.28□□□□□ -2.36
SLC6A13Q9NSD5 Y_RNA.809-201ENST00000516058 95 ntBASIC0.28□□□□□ -2.36
SLC6A13Q9NSD5 RNU6-1006P-201ENST00000516998 103 ntBASIC0.28□□□□□ -2.36
SLC6A13Q9NSD5 MTND5P40-201ENST00000559945 246 ntBASIC0.28□□□□□ -2.36
SLC6A13Q9NSD5 MIR4679-2-201ENST00000578358 77 ntBASIC0.28□□□□□ -2.36
SLC6A13Q9NSD5 AL109933.3-201ENST00000619095 188 ntBASIC0.28□□□□□ -2.36
SLC6A13Q9NSD5 SNORD38.1-201ENST00000363863 68 ntBASIC0.27□□□□□ -2.37
SLC6A13Q9NSD5 Y_RNA.221-201ENST00000364248 96 ntBASIC0.27□□□□□ -2.37
SLC6A13Q9NSD5 RNU6-187P-201ENST00000384139 106 ntBASIC0.27□□□□□ -2.37
SLC6A13Q9NSD5 RNU6-816P-201ENST00000390914 107 ntBASIC0.27□□□□□ -2.37
SLC6A13Q9NSD5 RNU6-1268P-201ENST00000391214 107 ntBASIC0.27□□□□□ -2.37
SLC6A13Q9NSD5 RNU6-1239P-201ENST00000391310 107 ntBASIC0.27□□□□□ -2.37
SLC6A13Q9NSD5 RNU6-848P-201ENST00000515948 107 ntBASIC0.27□□□□□ -2.37
SLC6A13Q9NSD5 RNU6-617P-201ENST00000516147 107 ntBASIC0.27□□□□□ -2.37
SLC6A13Q9NSD5 RNU6-473P-201ENST00000516164 107 ntBASIC0.27□□□□□ -2.37
SLC6A13Q9NSD5 RNU6-1049P-201ENST00000516414 107 ntBASIC0.27□□□□□ -2.37
SLC6A13Q9NSD5 RNU6-659P-201ENST00000516454 104 ntBASIC0.27□□□□□ -2.37
SLC6A13Q9NSD5 MIR4514-201ENST00000581410 57 ntBASIC0.27□□□□□ -2.37
SLC6A13Q9NSD5 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.27□□□□□ -2.37
SLC6A13Q9NSD5 AC067863.3-201ENST00000624172 122 ntBASIC0.27□□□□□ -2.37
SLC6A13Q9NSD5 U6.95-201ENST00000636931 70 ntBASIC0.27□□□□□ -2.37
SLC6A13Q9NSD5 Y_RNA.35-201ENST00000362601 101 ntBASIC0.26□□□□□ -2.37
SLC6A13Q9NSD5 Y_RNA.71-201ENST00000362892 104 ntBASIC0.26□□□□□ -2.37
SLC6A13Q9NSD5 RNU6-1260P-201ENST00000362944 107 ntBASIC0.26□□□□□ -2.37
SLC6A13Q9NSD5 AC073261.1-201ENST00000429409 121 ntBASIC0.26□□□□□ -2.37
SLC6A13Q9NSD5 MIR6755-201ENST00000619993 66 ntBASIC0.26□□□□□ -2.37
SLC6A13Q9NSD5 Y_RNA.374-201ENST00000365606 101 ntBASIC0.25□□□□□ -2.37
SLC6A13Q9NSD5 RNU6-1201P-201ENST00000384227 107 ntBASIC0.25□□□□□ -2.37
SLC6A13Q9NSD5 MIR548M-201ENST00000408260 86 ntBASIC0.25□□□□□ -2.37
SLC6A13Q9NSD5 Y_RNA.649-201ENST00000459077 103 ntBASIC0.25□□□□□ -2.37
SLC6A13Q9NSD5 SNORA62.5-201ENST00000516634 120 ntBASIC0.25□□□□□ -2.37
SLC6A13Q9NSD5 AC007012.1-201ENST00000567192 175 ntBASIC0.25□□□□□ -2.37
SLC6A13Q9NSD5 AL162376.1-201ENST00000624117 175 ntBASIC0.25□□□□□ -2.37
SLC6A13Q9NSD5 Y_RNA.309-201ENST00000365046 111 ntBASIC0.24□□□□□ -2.37
SLC6A13Q9NSD5 SNORD116-14-201ENST00000383894 92 ntBASIC0.24□□□□□ -2.37
SLC6A13Q9NSD5 SNORD116-17-201ENST00000383929 92 ntBASIC0.24□□□□□ -2.37
SLC6A13Q9NSD5 SNORD116-15-201ENST00000384445 92 ntBASIC0.24□□□□□ -2.37
SLC6A13Q9NSD5 SNORD116-19-201ENST00000384729 92 ntBASIC0.24□□□□□ -2.37
SLC6A13Q9NSD5 SNORD41.1-201ENST00000391000 69 ntBASIC0.24□□□□□ -2.37
SLC6A13Q9NSD5 MIR548G-201ENST00000408442 89 ntBASIC0.24□□□□□ -2.37
SLC6A13Q9NSD5 SPINT5P-201ENST00000448174 155 ntBASIC0.24□□□□□ -2.37
SLC6A13Q9NSD5 AC069113.3-201ENST00000521019 150 ntBASIC0.24□□□□□ -2.37
SLC6A13Q9NSD5 RNU6-90P-201ENST00000606352 106 ntBASIC0.24□□□□□ -2.37
SLC6A13Q9NSD5 AL035470.1-201ENST00000622571 220 ntBASIC0.24□□□□□ -2.37
SLC6A13Q9NSD5 Y_RNA.423-201ENST00000384057 113 ntBASIC0.23□□□□□ -2.37
SLC6A13Q9NSD5 RNU6-815P-201ENST00000384080 113 ntBASIC0.23□□□□□ -2.37
SLC6A13Q9NSD5 RNU7-106P-201ENST00000459514 67 ntBASIC0.23□□□□□ -2.37
SLC6A13Q9NSD5 SNORD33.1-201ENST00000516213 88 ntBASIC0.23□□□□□ -2.37
SLC6A13Q9NSD5 AL442128.1-201ENST00000615151 90 ntBASIC0.23□□□□□ -2.37
SLC6A13Q9NSD5 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.23□□□□□ -2.37
SLC6A13Q9NSD5 Y_RNA.247-201ENST00000364500 92 ntBASIC0.22□□□□□ -2.37
SLC6A13Q9NSD5 MIR516A2-201ENST00000384888 90 ntBASIC0.22□□□□□ -2.37
SLC6A13Q9NSD5 MIR516A1-201ENST00000385033 90 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 253.2 ms