Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.6□□□□□ -2.15
PDLIM7Q9NR12 RNU6-519P-201ENST00000410590 108 ntBASIC1.6□□□□□ -2.15
PDLIM7Q9NR12 RNU7-185P-201ENST00000459215 60 ntBASIC1.6□□□□□ -2.15
PDLIM7Q9NR12 RNU7-171P-201ENST00000459581 62 ntBASIC1.6□□□□□ -2.15
PDLIM7Q9NR12 RNU4-58P-201ENST00000363192 141 ntBASIC1.59□□□□□ -2.15
PDLIM7Q9NR12 RNU6-787P-201ENST00000384032 107 ntBASIC1.59□□□□□ -2.15
PDLIM7Q9NR12 MIR1255A-201ENST00000408338 113 ntBASIC1.59□□□□□ -2.15
PDLIM7Q9NR12 RNA5SP225-201ENST00000410874 135 ntBASIC1.59□□□□□ -2.15
PDLIM7Q9NR12 AC015818.7-201ENST00000428754 109 ntBASIC1.59□□□□□ -2.15
PDLIM7Q9NR12 AC087499.7-201ENST00000441958 109 ntBASIC1.59□□□□□ -2.15
PDLIM7Q9NR12 AC036111.3-201ENST00000526389 112 ntBASIC1.59□□□□□ -2.15
PDLIM7Q9NR12 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.59□□□□□ -2.15
PDLIM7Q9NR12 AC006160.2-201ENST00000637708 154 ntBASIC1.59□□□□□ -2.15
PDLIM7Q9NR12 RNU1-93P-201ENST00000364704 169 ntBASIC1.58□□□□□ -2.16
PDLIM7Q9NR12 RNU6-934P-201ENST00000365154 107 ntBASIC1.58□□□□□ -2.16
PDLIM7Q9NR12 Y_RNA.437-201ENST00000384113 113 ntBASIC1.58□□□□□ -2.16
PDLIM7Q9NR12 MIR516A2-201ENST00000384888 90 ntBASIC1.58□□□□□ -2.16
PDLIM7Q9NR12 MIR516A1-201ENST00000385033 90 ntBASIC1.58□□□□□ -2.16
PDLIM7Q9NR12 MIR1257-201ENST00000408490 117 ntBASIC1.58□□□□□ -2.16
PDLIM7Q9NR12 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.58□□□□□ -2.16
PDLIM7Q9NR12 MIR6515-201ENST00000619843 57 ntBASIC1.58□□□□□ -2.16
PDLIM7Q9NR12 PVT1_3.1-201ENST00000620853 95 ntBASIC1.58□□□□□ -2.16
PDLIM7Q9NR12 RNA5SP325-201ENST00000363756 130 ntBASIC1.57□□□□□ -2.16
PDLIM7Q9NR12 RPS29P23-201ENST00000458635 123 ntBASIC1.57□□□□□ -2.16
PDLIM7Q9NR12 RNU6-638P-201ENST00000516582 104 ntBASIC1.57□□□□□ -2.16
PDLIM7Q9NR12 AC023827.1-201ENST00000569247 97 ntBASIC1.57□□□□□ -2.16
PDLIM7Q9NR12 MIR4666B-201ENST00000578142 81 ntBASIC1.57□□□□□ -2.16
PDLIM7Q9NR12 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.56□□□□□ -2.16
PDLIM7Q9NR12 Y_RNA.313-201ENST00000365095 103 ntBASIC1.56□□□□□ -2.16
PDLIM7Q9NR12 AC013244.2-201ENST00000603396 103 ntBASIC1.56□□□□□ -2.16
PDLIM7Q9NR12 Y_RNA.13-201ENST00000362403 112 ntBASIC1.55□□□□□ -2.16
PDLIM7Q9NR12 RNU6-524P-201ENST00000384270 107 ntBASIC1.55□□□□□ -2.16
PDLIM7Q9NR12 MIR519C-201ENST00000385053 87 ntBASIC1.55□□□□□ -2.16
PDLIM7Q9NR12 AL591704.2-201ENST00000421658 181 ntBASIC1.55□□□□□ -2.16
PDLIM7Q9NR12 SNORD4B-201ENST00000459083 72 ntBASIC1.55□□□□□ -2.16
PDLIM7Q9NR12 MIR4771-2-201ENST00000577758 74 ntBASIC1.55□□□□□ -2.16
PDLIM7Q9NR12 MIR4771-1-201ENST00000582617 74 ntBASIC1.55□□□□□ -2.16
PDLIM7Q9NR12 SNORD36A-201ENST00000362874 73 ntBASIC1.54□□□□□ -2.16
PDLIM7Q9NR12 RNU6-910P-201ENST00000390844 107 ntBASIC1.54□□□□□ -2.16
PDLIM7Q9NR12 RNU6-1254P-201ENST00000391266 104 ntBASIC1.54□□□□□ -2.16
PDLIM7Q9NR12 SNORD111-201ENST00000408139 94 ntBASIC1.54□□□□□ -2.16
PDLIM7Q9NR12 RNU7-85P-201ENST00000458851 63 ntBASIC1.54□□□□□ -2.16
PDLIM7Q9NR12 snoU13.11-201ENST00000459219 104 ntBASIC1.54□□□□□ -2.16
PDLIM7Q9NR12 RNU7-21P-201ENST00000459430 62 ntBASIC1.54□□□□□ -2.16
PDLIM7Q9NR12 Y_RNA.648-201ENST00000459455 110 ntBASIC1.54□□□□□ -2.16
PDLIM7Q9NR12 RNU7-106P-201ENST00000459514 67 ntBASIC1.54□□□□□ -2.16
PDLIM7Q9NR12 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.54□□□□□ -2.16
PDLIM7Q9NR12 MIR6082-201ENST00000613604 109 ntBASIC1.54□□□□□ -2.16
PDLIM7Q9NR12 AC106800.4-201ENST00000614905 153 ntBASIC1.54□□□□□ -2.16
PDLIM7Q9NR12 MIR101-2-201ENST00000362195 79 ntBASIC1.53□□□□□ -2.16
PDLIM7Q9NR12 MIR520E-201ENST00000384867 87 ntBASIC1.53□□□□□ -2.16
PDLIM7Q9NR12 RNU6-243P-201ENST00000391140 107 ntBASIC1.53□□□□□ -2.16
PDLIM7Q9NR12 SNORD100-201ENST00000408573 76 ntBASIC1.53□□□□□ -2.16
PDLIM7Q9NR12 SNORD63B-201ENST00000411005 70 ntBASIC1.53□□□□□ -2.16
PDLIM7Q9NR12 RNU4-32P-201ENST00000363404 141 ntBASIC1.52□□□□□ -2.17
PDLIM7Q9NR12 SNORD26-201ENST00000384147 75 ntBASIC1.52□□□□□ -2.17
PDLIM7Q9NR12 SNORA80D-201ENST00000384488 135 ntBASIC1.52□□□□□ -2.17
PDLIM7Q9NR12 MIR125B2-201ENST00000385128 89 ntBASIC1.52□□□□□ -2.17
PDLIM7Q9NR12 Y_RNA.607-201ENST00000410597 98 ntBASIC1.52□□□□□ -2.17
PDLIM7Q9NR12 RPS29P1-201ENST00000465274 159 ntBASIC1.52□□□□□ -2.17
PDLIM7Q9NR12 AC093729.1-201ENST00000513074 128 ntBASIC1.52□□□□□ -2.17
PDLIM7Q9NR12 RNU7-40P-201ENST00000516397 64 ntBASIC1.52□□□□□ -2.17
PDLIM7Q9NR12 RNA5SP61-201ENST00000516453 100 ntBASIC1.52□□□□□ -2.17
PDLIM7Q9NR12 SNORD114-27-201ENST00000363766 70 ntBASIC1.51□□□□□ -2.17
PDLIM7Q9NR12 RNU6-652P-201ENST00000365488 107 ntBASIC1.51□□□□□ -2.17
PDLIM7Q9NR12 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
PDLIM7Q9NR12 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.51□□□□□ -2.17
PDLIM7Q9NR12 RPS26P5-201ENST00000418544 335 ntBASIC1.51□□□□□ -2.17
PDLIM7Q9NR12 AC004223.1-201ENST00000479840 271 ntBASIC1.51□□□□□ -2.17
PDLIM7Q9NR12 RNU6-1194P-201ENST00000516208 104 ntBASIC1.51□□□□□ -2.17
PDLIM7Q9NR12 RNU7-153P-201ENST00000516455 62 ntBASIC1.51□□□□□ -2.17
PDLIM7Q9NR12 RNA5SP395-201ENST00000516567 118 ntBASIC1.51□□□□□ -2.17
PDLIM7Q9NR12 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.51□□□□□ -2.17
PDLIM7Q9NR12 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.51□□□□□ -2.17
PDLIM7Q9NR12 MIR3660-201ENST00000584845 100 ntBASIC1.51□□□□□ -2.17
PDLIM7Q9NR12 SNORD115-37-201ENST00000363768 82 ntBASIC1.5□□□□□ -2.17
PDLIM7Q9NR12 Y_RNA.536-201ENST00000384621 113 ntBASIC1.5□□□□□ -2.17
PDLIM7Q9NR12 MIR635-201ENST00000384830 98 ntBASIC1.5□□□□□ -2.17
PDLIM7Q9NR12 MIR1236-201ENST00000408340 102 ntBASIC1.5□□□□□ -2.17
PDLIM7Q9NR12 TRAJ51-201ENST00000504127 63 ntBASIC1.5□□□□□ -2.17
PDLIM7Q9NR12 SNORD79.1-201ENST00000516069 84 ntBASIC1.5□□□□□ -2.17
PDLIM7Q9NR12 RNU7-156P-201ENST00000517214 74 ntBASIC1.5□□□□□ -2.17
PDLIM7Q9NR12 SNORA25.8-201ENST00000364831 128 ntBASIC1.49□□□□□ -2.17
PDLIM7Q9NR12 RNU6-997P-201ENST00000384725 107 ntBASIC1.49□□□□□ -2.17
PDLIM7Q9NR12 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
PDLIM7Q9NR12 RNU7-90P-201ENST00000459216 62 ntBASIC1.49□□□□□ -2.17
PDLIM7Q9NR12 MIR548H5-201ENST00000580314 60 ntBASIC1.49□□□□□ -2.17
PDLIM7Q9NR12 MIR4676-201ENST00000583078 72 ntBASIC1.49□□□□□ -2.17
PDLIM7Q9NR12 MIR4536-1-201ENST00000583537 88 ntBASIC1.49□□□□□ -2.17
PDLIM7Q9NR12 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
PDLIM7Q9NR12 Y_RNA.42-201ENST00000362660 108 ntBASIC1.48□□□□□ -2.17
PDLIM7Q9NR12 RNU7-195P-201ENST00000458793 62 ntBASIC1.48□□□□□ -2.17
PDLIM7Q9NR12 RNU6-65P-201ENST00000516332 98 ntBASIC1.48□□□□□ -2.17
PDLIM7Q9NR12 RNU6-1223P-201ENST00000517124 104 ntBASIC1.48□□□□□ -2.17
PDLIM7Q9NR12 MIR151B-201ENST00000584249 96 ntBASIC1.48□□□□□ -2.17
PDLIM7Q9NR12 MIR6767-201ENST00000637302 66 ntBASIC1.48□□□□□ -2.17
PDLIM7Q9NR12 Y_RNA.56-201ENST00000362798 112 ntBASIC1.47□□□□□ -2.17
PDLIM7Q9NR12 Y_RNA.283-201ENST00000364798 112 ntBASIC1.47□□□□□ -2.17
PDLIM7Q9NR12 Y_RNA.316-201ENST00000365118 111 ntBASIC1.47□□□□□ -2.17
PDLIM7Q9NR12 SNORA40.6-201ENST00000391153 128 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms