Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 MIR6082-201ENST00000613604 109 ntBASIC1.48□□□□□ -2.17
PCDH18Q9HCL0 MIRLET7F1-201ENST00000362202 87 ntBASIC1.47□□□□□ -2.17
PCDH18Q9HCL0 RNU6-132P-201ENST00000383863 107 ntBASIC1.47□□□□□ -2.17
PCDH18Q9HCL0 RNU6-994P-201ENST00000410507 111 ntBASIC1.47□□□□□ -2.17
PCDH18Q9HCL0 RNA5SP395-201ENST00000516567 118 ntBASIC1.47□□□□□ -2.17
PCDH18Q9HCL0 AL512598.1-201ENST00000610158 273 ntBASIC1.47□□□□□ -2.17
PCDH18Q9HCL0 AL157834.3-201ENST00000615543 103 ntBASIC1.47□□□□□ -2.17
PCDH18Q9HCL0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
PCDH18Q9HCL0 Y_RNA.221-201ENST00000364248 96 ntBASIC1.46□□□□□ -2.18
PCDH18Q9HCL0 MIR635-201ENST00000384830 98 ntBASIC1.46□□□□□ -2.18
PCDH18Q9HCL0 MIR125B2-201ENST00000385128 89 ntBASIC1.46□□□□□ -2.18
PCDH18Q9HCL0 SNORA17.3-201ENST00000391159 129 ntBASIC1.46□□□□□ -2.18
PCDH18Q9HCL0 AL591704.2-201ENST00000421658 181 ntBASIC1.46□□□□□ -2.18
PCDH18Q9HCL0 AL606490.4-201ENST00000423117 127 ntBASIC1.46□□□□□ -2.18
PCDH18Q9HCL0 RPS29P23-201ENST00000458635 123 ntBASIC1.46□□□□□ -2.18
PCDH18Q9HCL0 RNU6-65P-201ENST00000516332 98 ntBASIC1.46□□□□□ -2.18
PCDH18Q9HCL0 Y_RNA.697-201ENST00000516776 113 ntBASIC1.46□□□□□ -2.18
PCDH18Q9HCL0 MIR4676-201ENST00000583078 72 ntBASIC1.46□□□□□ -2.18
PCDH18Q9HCL0 Y_RNA.283-201ENST00000364798 112 ntBASIC1.45□□□□□ -2.18
PCDH18Q9HCL0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
PCDH18Q9HCL0 MIR1236-201ENST00000408340 102 ntBASIC1.45□□□□□ -2.18
PCDH18Q9HCL0 RPS26P5-201ENST00000418544 335 ntBASIC1.45□□□□□ -2.18
PCDH18Q9HCL0 AL450471.1-201ENST00000447509 127 ntBASIC1.45□□□□□ -2.18
PCDH18Q9HCL0 RNU7-21P-201ENST00000459430 62 ntBASIC1.45□□□□□ -2.18
PCDH18Q9HCL0 SNORA25.13-201ENST00000516395 103 ntBASIC1.45□□□□□ -2.18
PCDH18Q9HCL0 AC106800.4-201ENST00000614905 153 ntBASIC1.45□□□□□ -2.18
PCDH18Q9HCL0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
PCDH18Q9HCL0 RNA5SP245-201ENST00000364239 121 ntBASIC1.44□□□□□ -2.18
PCDH18Q9HCL0 RNU6-364P-201ENST00000384387 107 ntBASIC1.44□□□□□ -2.18
PCDH18Q9HCL0 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.44□□□□□ -2.18
PCDH18Q9HCL0 AC092628.1-201ENST00000436250 252 ntBASIC1.44□□□□□ -2.18
PCDH18Q9HCL0 RNU6-75P-201ENST00000515944 104 ntBASIC1.44□□□□□ -2.18
PCDH18Q9HCL0 AC140658.3-201ENST00000567603 271 ntBASIC1.44□□□□□ -2.18
PCDH18Q9HCL0 AC008608.1-201ENST00000603910 127 ntBASIC1.44□□□□□ -2.18
PCDH18Q9HCL0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.44□□□□□ -2.18
PCDH18Q9HCL0 Y_RNA.94-201ENST00000363068 106 ntBASIC1.43□□□□□ -2.18
PCDH18Q9HCL0 RNU6-466P-201ENST00000391224 103 ntBASIC1.43□□□□□ -2.18
PCDH18Q9HCL0 RNU6-279P-201ENST00000391297 101 ntBASIC1.43□□□□□ -2.18
PCDH18Q9HCL0 SNORA18.5-201ENST00000516616 101 ntBASIC1.43□□□□□ -2.18
PCDH18Q9HCL0 MIR4796-201ENST00000580742 81 ntBASIC1.43□□□□□ -2.18
PCDH18Q9HCL0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
PCDH18Q9HCL0 Y_RNA.42-201ENST00000362660 108 ntBASIC1.42□□□□□ -2.18
PCDH18Q9HCL0 RNU6-811P-201ENST00000384069 107 ntBASIC1.42□□□□□ -2.18
PCDH18Q9HCL0 SNORA80D-201ENST00000384488 135 ntBASIC1.42□□□□□ -2.18
PCDH18Q9HCL0 MIR222-201ENST00000384992 110 ntBASIC1.42□□□□□ -2.18
PCDH18Q9HCL0 MIR100-201ENST00000385259 80 ntBASIC1.42□□□□□ -2.18
PCDH18Q9HCL0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.42□□□□□ -2.18
PCDH18Q9HCL0 SNORD90-201ENST00000391145 111 ntBASIC1.42□□□□□ -2.18
PCDH18Q9HCL0 SNORD111-201ENST00000408139 94 ntBASIC1.42□□□□□ -2.18
PCDH18Q9HCL0 RNU7-102P-201ENST00000458948 62 ntBASIC1.42□□□□□ -2.18
PCDH18Q9HCL0 Y_RNA.809-201ENST00000516058 95 ntBASIC1.42□□□□□ -2.18
PCDH18Q9HCL0 SNORD79.1-201ENST00000516069 84 ntBASIC1.42□□□□□ -2.18
PCDH18Q9HCL0 MIR4781-201ENST00000585250 76 ntBASIC1.42□□□□□ -2.18
PCDH18Q9HCL0 RNU6-369P-201ENST00000362515 102 ntBASIC1.41□□□□□ -2.18
PCDH18Q9HCL0 RNU6-977P-201ENST00000516411 103 ntBASIC1.41□□□□□ -2.18
PCDH18Q9HCL0 RNU6-448P-201ENST00000517052 107 ntBASIC1.41□□□□□ -2.18
PCDH18Q9HCL0 SNORA70.22-201ENST00000517160 124 ntBASIC1.41□□□□□ -2.18
PCDH18Q9HCL0 MIR548H5-201ENST00000580314 60 ntBASIC1.41□□□□□ -2.18
PCDH18Q9HCL0 AC027335.2-201ENST00000624030 375 ntBASIC1.41□□□□□ -2.18
PCDH18Q9HCL0 RNA5SP327-201ENST00000362494 101 ntBASIC1.4□□□□□ -2.19
PCDH18Q9HCL0 RNU6-478P-201ENST00000363904 110 ntBASIC1.4□□□□□ -2.19
PCDH18Q9HCL0 RNU6-535P-201ENST00000384722 107 ntBASIC1.4□□□□□ -2.19
PCDH18Q9HCL0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
PCDH18Q9HCL0 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.4□□□□□ -2.19
PCDH18Q9HCL0 RNU7-90P-201ENST00000459216 62 ntBASIC1.4□□□□□ -2.19
PCDH18Q9HCL0 RNU6-1108P-201ENST00000516308 104 ntBASIC1.4□□□□□ -2.19
PCDH18Q9HCL0 MIR3064-201ENST00000581130 66 ntBASIC1.4□□□□□ -2.19
PCDH18Q9HCL0 MIR4712-201ENST00000583750 82 ntBASIC1.4□□□□□ -2.19
PCDH18Q9HCL0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.4□□□□□ -2.19
PCDH18Q9HCL0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
PCDH18Q9HCL0 ZNF209P-201ENST00000593450 2304 ntBASIC1.4□□□□□ -2.19
PCDH18Q9HCL0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
PCDH18Q9HCL0 MIR337-201ENST00000362281 93 ntBASIC1.39□□□□□ -2.19
PCDH18Q9HCL0 RNU6-161P-201ENST00000363051 106 ntBASIC1.39□□□□□ -2.19
PCDH18Q9HCL0 RNU6-24P-201ENST00000384440 107 ntBASIC1.39□□□□□ -2.19
PCDH18Q9HCL0 RNU6-291P-201ENST00000384720 107 ntBASIC1.39□□□□□ -2.19
PCDH18Q9HCL0 MIR758-201ENST00000390227 88 ntBASIC1.39□□□□□ -2.19
PCDH18Q9HCL0 MIR938-201ENST00000401216 83 ntBASIC1.39□□□□□ -2.19
PCDH18Q9HCL0 RNU4-62P-201ENST00000410125 130 ntBASIC1.39□□□□□ -2.19
PCDH18Q9HCL0 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
PCDH18Q9HCL0 MIR4804-201ENST00000581683 73 ntBASIC1.39□□□□□ -2.19
PCDH18Q9HCL0 TRDV1-202ENST00000621643 102 ntBASIC1.39□□□□□ -2.19
PCDH18Q9HCL0 Y_RNA.56-201ENST00000362798 112 ntBASIC1.38□□□□□ -2.19
PCDH18Q9HCL0 MIR520F-201ENST00000384824 87 ntBASIC1.38□□□□□ -2.19
PCDH18Q9HCL0 RNU1-123P-201ENST00000458950 160 ntBASIC1.38□□□□□ -2.19
PCDH18Q9HCL0 Y_RNA.676-201ENST00000516393 96 ntBASIC1.38□□□□□ -2.19
PCDH18Q9HCL0 AC104996.3-201ENST00000590718 94 ntBASIC1.38□□□□□ -2.19
PCDH18Q9HCL0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.38□□□□□ -2.19
PCDH18Q9HCL0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.38□□□□□ -2.19
PCDH18Q9HCL0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
PCDH18Q9HCL0 Y_RNA.491-201ENST00000384417 107 ntBASIC1.37□□□□□ -2.19
PCDH18Q9HCL0 AC004223.1-201ENST00000479840 271 ntBASIC1.37□□□□□ -2.19
PCDH18Q9HCL0 U6.100-201ENST00000636230 99 ntBASIC1.37□□□□□ -2.19
PCDH18Q9HCL0 MIR1-1-201ENST00000362147 71 ntBASIC1.36□□□□□ -2.19
PCDH18Q9HCL0 MIR599-201ENST00000385069 95 ntBASIC1.36□□□□□ -2.19
PCDH18Q9HCL0 RNU6-129P-201ENST00000391022 107 ntBASIC1.36□□□□□ -2.19
PCDH18Q9HCL0 AC002429.1-201ENST00000437672 148 ntBASIC1.36□□□□□ -2.19
PCDH18Q9HCL0 AL603825.1-201ENST00000438481 80 ntBASIC1.36□□□□□ -2.19
PCDH18Q9HCL0 SNORD92-201ENST00000585078 85 ntBASIC1.36□□□□□ -2.19
PCDH18Q9HCL0 RNA5SP99-201ENST00000364020 114 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms