Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 Y_RNA.567-201ENST00000384736 106 ntBASIC0.58□□□□□ -2.32
PCDH9Q9HC56 TRAJ51-201ENST00000504127 63 ntBASIC0.58□□□□□ -2.32
PCDH9Q9HC56 RNU6-412P-201ENST00000516434 106 ntBASIC0.58□□□□□ -2.32
PCDH9Q9HC56 RNU6-1018P-201ENST00000516577 106 ntBASIC0.58□□□□□ -2.32
PCDH9Q9HC56 AL442128.1-201ENST00000615151 90 ntBASIC0.58□□□□□ -2.32
PCDH9Q9HC56 PVT1_3.1-201ENST00000620853 95 ntBASIC0.58□□□□□ -2.32
PCDH9Q9HC56 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.58□□□□□ -2.32
PCDH9Q9HC56 Y_RNA.36-201ENST00000362602 112 ntBASIC0.57□□□□□ -2.32
PCDH9Q9HC56 SNORD38.1-201ENST00000363863 68 ntBASIC0.57□□□□□ -2.32
PCDH9Q9HC56 RNU6-1201P-201ENST00000384227 107 ntBASIC0.57□□□□□ -2.32
PCDH9Q9HC56 RNU6-850P-201ENST00000516934 103 ntBASIC0.57□□□□□ -2.32
PCDH9Q9HC56 AC138869.1-201ENST00000568623 124 ntBASIC0.57□□□□□ -2.32
PCDH9Q9HC56 RNU6-90P-201ENST00000606352 106 ntBASIC0.57□□□□□ -2.32
PCDH9Q9HC56 RNU7-10P-201ENST00000607194 63 ntBASIC0.57□□□□□ -2.32
PCDH9Q9HC56 SNORD18A-201ENST00000363753 72 ntBASIC0.56□□□□□ -2.32
PCDH9Q9HC56 RNU6-1229P-201ENST00000364295 107 ntBASIC0.56□□□□□ -2.32
PCDH9Q9HC56 Y_RNA.281-201ENST00000364774 94 ntBASIC0.56□□□□□ -2.32
PCDH9Q9HC56 RNU6-1107P-201ENST00000364817 104 ntBASIC0.56□□□□□ -2.32
PCDH9Q9HC56 RNU6-1081P-201ENST00000384537 107 ntBASIC0.56□□□□□ -2.32
PCDH9Q9HC56 MIR7-2-201ENST00000384970 110 ntBASIC0.56□□□□□ -2.32
PCDH9Q9HC56 MIR577-201ENST00000385196 96 ntBASIC0.56□□□□□ -2.32
PCDH9Q9HC56 MIR548G-201ENST00000408442 89 ntBASIC0.56□□□□□ -2.32
PCDH9Q9HC56 RNA5SP94-201ENST00000516917 108 ntBASIC0.56□□□□□ -2.32
PCDH9Q9HC56 RNU6-1014P-201ENST00000383940 103 ntBASIC0.55□□□□□ -2.32
PCDH9Q9HC56 MIR548I2-201ENST00000408348 149 ntBASIC0.55□□□□□ -2.32
PCDH9Q9HC56 SNORD63B-201ENST00000411005 70 ntBASIC0.55□□□□□ -2.32
PCDH9Q9HC56 SNRPGP12-201ENST00000449481 213 ntBASIC0.55□□□□□ -2.32
PCDH9Q9HC56 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
PCDH9Q9HC56 AC096720.1-201ENST00000604441 183 ntBASIC0.55□□□□□ -2.32
PCDH9Q9HC56 AC092634.7-201ENST00000621022 103 ntBASIC0.55□□□□□ -2.32
PCDH9Q9HC56 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.55□□□□□ -2.32
PCDH9Q9HC56 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
PCDH9Q9HC56 RNU6-170P-201ENST00000362832 104 ntBASIC0.54□□□□□ -2.32
PCDH9Q9HC56 RNU6-832P-201ENST00000363319 107 ntBASIC0.54□□□□□ -2.32
PCDH9Q9HC56 SNORA36.1-201ENST00000363424 132 ntBASIC0.54□□□□□ -2.32
PCDH9Q9HC56 SNORD115-24-201ENST00000363528 82 ntBASIC0.54□□□□□ -2.32
PCDH9Q9HC56 Y_RNA.221-201ENST00000364248 96 ntBASIC0.54□□□□□ -2.32
PCDH9Q9HC56 RNU6-945P-201ENST00000383947 107 ntBASIC0.54□□□□□ -2.32
PCDH9Q9HC56 RNU6-571P-201ENST00000384128 107 ntBASIC0.54□□□□□ -2.32
PCDH9Q9HC56 MIR216A-201ENST00000385063 110 ntBASIC0.54□□□□□ -2.32
PCDH9Q9HC56 RNU7-195P-201ENST00000458793 62 ntBASIC0.54□□□□□ -2.32
PCDH9Q9HC56 Y_RNA.659-201ENST00000515994 113 ntBASIC0.54□□□□□ -2.32
PCDH9Q9HC56 RNU4-54P-201ENST00000516428 129 ntBASIC0.54□□□□□ -2.32
PCDH9Q9HC56 AC141557.1-201ENST00000540982 400 ntBASIC0.54□□□□□ -2.32
PCDH9Q9HC56 MIR4694-201ENST00000578534 80 ntBASIC0.54□□□□□ -2.32
PCDH9Q9HC56 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
PCDH9Q9HC56 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.54□□□□□ -2.32
PCDH9Q9HC56 RNY3P2-201ENST00000362918 102 ntBASIC0.53□□□□□ -2.32
PCDH9Q9HC56 RNU6-1290P-201ENST00000362957 109 ntBASIC0.53□□□□□ -2.32
PCDH9Q9HC56 RNA5SP517-201ENST00000364724 117 ntBASIC0.53□□□□□ -2.32
PCDH9Q9HC56 Y_RNA.342-201ENST00000365352 113 ntBASIC0.53□□□□□ -2.32
PCDH9Q9HC56 MIR516A2-201ENST00000384888 90 ntBASIC0.53□□□□□ -2.32
PCDH9Q9HC56 MIR516A1-201ENST00000385033 90 ntBASIC0.53□□□□□ -2.32
PCDH9Q9HC56 RNU7-106P-201ENST00000459514 67 ntBASIC0.53□□□□□ -2.32
PCDH9Q9HC56 RNA5SP436-201ENST00000516020 115 ntBASIC0.53□□□□□ -2.32
PCDH9Q9HC56 MIR548AI-201ENST00000579940 88 ntBASIC0.53□□□□□ -2.32
PCDH9Q9HC56 AC244669.1-204ENST00000621564 178 ntBASIC0.53□□□□□ -2.32
PCDH9Q9HC56 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
PCDH9Q9HC56 RNU6-834P-201ENST00000362367 110 ntBASIC0.52□□□□□ -2.33
PCDH9Q9HC56 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
PCDH9Q9HC56 RNU6-1099P-201ENST00000363533 107 ntBASIC0.52□□□□□ -2.33
PCDH9Q9HC56 SNORD114-26-201ENST00000363543 72 ntBASIC0.52□□□□□ -2.33
PCDH9Q9HC56 RNA5SP499-201ENST00000363982 119 ntBASIC0.52□□□□□ -2.33
PCDH9Q9HC56 SNORD28-201ENST00000384706 75 ntBASIC0.52□□□□□ -2.33
PCDH9Q9HC56 MIR599-201ENST00000385069 95 ntBASIC0.52□□□□□ -2.33
PCDH9Q9HC56 AC244505.6-201ENST00000452829 130 ntBASIC0.52□□□□□ -2.33
PCDH9Q9HC56 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
PCDH9Q9HC56 RNU6-135P-201ENST00000516769 101 ntBASIC0.52□□□□□ -2.33
PCDH9Q9HC56 MIR3613-201ENST00000579844 87 ntBASIC0.52□□□□□ -2.33
PCDH9Q9HC56 RN7SL793P-201ENST00000583259 296 ntBASIC0.52□□□□□ -2.33
PCDH9Q9HC56 Y_RNA.57-201ENST00000362806 113 ntBASIC0.51□□□□□ -2.33
PCDH9Q9HC56 Y_RNA.273-201ENST00000364703 102 ntBASIC0.51□□□□□ -2.33
PCDH9Q9HC56 Y_RNA.323-201ENST00000365157 109 ntBASIC0.51□□□□□ -2.33
PCDH9Q9HC56 RNY1P4-201ENST00000384595 115 ntBASIC0.51□□□□□ -2.33
PCDH9Q9HC56 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.51□□□□□ -2.33
PCDH9Q9HC56 Y_RNA.809-201ENST00000516058 95 ntBASIC0.51□□□□□ -2.33
PCDH9Q9HC56 RNA5SP47-201ENST00000517230 109 ntBASIC0.51□□□□□ -2.33
PCDH9Q9HC56 MIR4639-201ENST00000584938 69 ntBASIC0.51□□□□□ -2.33
PCDH9Q9HC56 SNORA25.18-201ENST00000607153 114 ntBASIC0.51□□□□□ -2.33
PCDH9Q9HC56 MIR6513-201ENST00000621188 64 ntBASIC0.51□□□□□ -2.33
PCDH9Q9HC56 Y_RNA.163-201ENST00000363702 113 ntBASIC0.5□□□□□ -2.33
PCDH9Q9HC56 RNU6-1325P-201ENST00000364905 105 ntBASIC0.5□□□□□ -2.33
PCDH9Q9HC56 RNU6-716P-201ENST00000365621 103 ntBASIC0.5□□□□□ -2.33
PCDH9Q9HC56 Y_RNA.377-201ENST00000365644 108 ntBASIC0.5□□□□□ -2.33
PCDH9Q9HC56 Y_RNA.540-201ENST00000384638 111 ntBASIC0.5□□□□□ -2.33
PCDH9Q9HC56 AC109327.2-201ENST00000448339 378 ntBASIC0.5□□□□□ -2.33
PCDH9Q9HC56 RNA5SP227-201ENST00000516184 113 ntBASIC0.5□□□□□ -2.33
PCDH9Q9HC56 RNA5SP268-201ENST00000516828 124 ntBASIC0.5□□□□□ -2.33
PCDH9Q9HC56 AC018659.1-201ENST00000551083 169 ntBASIC0.5□□□□□ -2.33
PCDH9Q9HC56 RNU6-86P-201ENST00000606534 107 ntBASIC0.5□□□□□ -2.33
PCDH9Q9HC56 MIR6828-201ENST00000636181 60 ntBASIC0.5□□□□□ -2.33
PCDH9Q9HC56 Y_RNA.173-201ENST00000363776 113 ntBASIC0.49□□□□□ -2.33
PCDH9Q9HC56 RNU4-36P-201ENST00000364294 144 ntBASIC0.49□□□□□ -2.33
PCDH9Q9HC56 SNORA8.2-201ENST00000384372 139 ntBASIC0.49□□□□□ -2.33
PCDH9Q9HC56 MIR519A1-201ENST00000385257 85 ntBASIC0.49□□□□□ -2.33
PCDH9Q9HC56 MIR548L-201ENST00000408303 86 ntBASIC0.49□□□□□ -2.33
PCDH9Q9HC56 SNORA19.1-201ENST00000410656 129 ntBASIC0.49□□□□□ -2.33
PCDH9Q9HC56 AC097635.1-201ENST00000450678 155 ntBASIC0.49□□□□□ -2.33
PCDH9Q9HC56 RNU7-104P-201ENST00000459398 79 ntBASIC0.49□□□□□ -2.33
PCDH9Q9HC56 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms