Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AL161932.1-201ENST00000437408 146 ntBASIC1.2□□□□□ -2.22
EBF3Q9H4W6 RNU7-153P-201ENST00000516455 62 ntBASIC1.2□□□□□ -2.22
EBF3Q9H4W6 MIR4295-201ENST00000585286 85 ntBASIC1.2□□□□□ -2.22
EBF3Q9H4W6 MIR6734-201ENST00000621166 68 ntBASIC1.2□□□□□ -2.22
EBF3Q9H4W6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
EBF3Q9H4W6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
EBF3Q9H4W6 RNU6-652P-201ENST00000365488 107 ntBASIC1.19□□□□□ -2.22
EBF3Q9H4W6 Y_RNA.426-201ENST00000384068 113 ntBASIC1.19□□□□□ -2.22
EBF3Q9H4W6 MIR520E-201ENST00000384867 87 ntBASIC1.19□□□□□ -2.22
EBF3Q9H4W6 MT-TF-201ENST00000387314 71 ntBASIC1.19□□□□□ -2.22
EBF3Q9H4W6 RNU6-279P-201ENST00000391297 101 ntBASIC1.19□□□□□ -2.22
EBF3Q9H4W6 AC015818.7-201ENST00000428754 109 ntBASIC1.19□□□□□ -2.22
EBF3Q9H4W6 SNORD4B-201ENST00000459083 72 ntBASIC1.19□□□□□ -2.22
EBF3Q9H4W6 AC087343.1-201ENST00000477341 475 ntBASIC1.19□□□□□ -2.22
EBF3Q9H4W6 AC048334.1-201ENST00000477975 159 ntBASIC1.19□□□□□ -2.22
EBF3Q9H4W6 RNU6-531P-201ENST00000516694 104 ntBASIC1.19□□□□□ -2.22
EBF3Q9H4W6 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.19□□□□□ -2.22
EBF3Q9H4W6 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.19□□□□□ -2.22
EBF3Q9H4W6 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.19□□□□□ -2.22
EBF3Q9H4W6 RMST_2.1-201ENST00000617263 136 ntBASIC1.19□□□□□ -2.22
EBF3Q9H4W6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.18□□□□□ -2.22
EBF3Q9H4W6 Y_RNA.57-201ENST00000362806 113 ntBASIC1.18□□□□□ -2.22
EBF3Q9H4W6 RNU7-106P-201ENST00000459514 67 ntBASIC1.18□□□□□ -2.22
EBF3Q9H4W6 RNU6-857P-201ENST00000515893 110 ntBASIC1.18□□□□□ -2.22
EBF3Q9H4W6 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.18□□□□□ -2.22
EBF3Q9H4W6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.18□□□□□ -2.22
EBF3Q9H4W6 MIR8066-201ENST00000617280 78 ntBASIC1.18□□□□□ -2.22
EBF3Q9H4W6 MIR6767-201ENST00000637302 66 ntBASIC1.18□□□□□ -2.22
EBF3Q9H4W6 MIR26B-201ENST00000362251 77 ntBASIC1.17□□□□□ -2.22
EBF3Q9H4W6 Y_RNA.94-201ENST00000363068 106 ntBASIC1.17□□□□□ -2.22
EBF3Q9H4W6 Y_RNA.244-201ENST00000364484 109 ntBASIC1.17□□□□□ -2.22
EBF3Q9H4W6 Y_RNA.316-201ENST00000365118 111 ntBASIC1.17□□□□□ -2.22
EBF3Q9H4W6 RNU1-36P-201ENST00000365130 165 ntBASIC1.17□□□□□ -2.22
EBF3Q9H4W6 RNU6-571P-201ENST00000384128 107 ntBASIC1.17□□□□□ -2.22
EBF3Q9H4W6 MIR516A2-201ENST00000384888 90 ntBASIC1.17□□□□□ -2.22
EBF3Q9H4W6 MIR516A1-201ENST00000385033 90 ntBASIC1.17□□□□□ -2.22
EBF3Q9H4W6 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
EBF3Q9H4W6 SNORA75.2-201ENST00000391138 150 ntBASIC1.17□□□□□ -2.22
EBF3Q9H4W6 SNORA75.3-201ENST00000391231 150 ntBASIC1.17□□□□□ -2.22
EBF3Q9H4W6 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.17□□□□□ -2.22
EBF3Q9H4W6 snoU13.11-201ENST00000459219 104 ntBASIC1.17□□□□□ -2.22
EBF3Q9H4W6 RPS29P1-201ENST00000465274 159 ntBASIC1.17□□□□□ -2.22
EBF3Q9H4W6 SNORA31.2-201ENST00000516019 134 ntBASIC1.17□□□□□ -2.22
EBF3Q9H4W6 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.17□□□□□ -2.22
EBF3Q9H4W6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
EBF3Q9H4W6 SNORD36A-201ENST00000362874 73 ntBASIC1.16□□□□□ -2.22
EBF3Q9H4W6 RNU6-939P-201ENST00000384634 107 ntBASIC1.16□□□□□ -2.22
EBF3Q9H4W6 MIR519C-201ENST00000385053 87 ntBASIC1.16□□□□□ -2.22
EBF3Q9H4W6 SNORD93-201ENST00000408813 74 ntBASIC1.16□□□□□ -2.22
EBF3Q9H4W6 RNU6-519P-201ENST00000410590 108 ntBASIC1.16□□□□□ -2.22
EBF3Q9H4W6 Y_RNA.607-201ENST00000410597 98 ntBASIC1.16□□□□□ -2.22
EBF3Q9H4W6 SNORD83.1-201ENST00000411362 77 ntBASIC1.16□□□□□ -2.22
EBF3Q9H4W6 AC036111.3-201ENST00000526389 112 ntBASIC1.16□□□□□ -2.22
EBF3Q9H4W6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
EBF3Q9H4W6 Y_RNA.221-201ENST00000364248 96 ntBASIC1.15□□□□□ -2.23
EBF3Q9H4W6 MIR18B-201ENST00000454574 71 ntBASIC1.15□□□□□ -2.23
EBF3Q9H4W6 RNU7-185P-201ENST00000459215 60 ntBASIC1.15□□□□□ -2.23
EBF3Q9H4W6 RNU6-75P-201ENST00000515944 104 ntBASIC1.15□□□□□ -2.23
EBF3Q9H4W6 AC140658.3-201ENST00000567603 271 ntBASIC1.15□□□□□ -2.23
EBF3Q9H4W6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
EBF3Q9H4W6 RNU6-403P-201ENST00000363163 104 ntBASIC1.14□□□□□ -2.23
EBF3Q9H4W6 RNU4-32P-201ENST00000363404 141 ntBASIC1.14□□□□□ -2.23
EBF3Q9H4W6 Y_RNA.330-201ENST00000365230 109 ntBASIC1.14□□□□□ -2.23
EBF3Q9H4W6 MIR222-201ENST00000384992 110 ntBASIC1.14□□□□□ -2.23
EBF3Q9H4W6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.14□□□□□ -2.23
EBF3Q9H4W6 Y_RNA.648-201ENST00000459455 110 ntBASIC1.14□□□□□ -2.23
EBF3Q9H4W6 AC093729.1-201ENST00000513074 128 ntBASIC1.14□□□□□ -2.23
EBF3Q9H4W6 AC013244.2-201ENST00000603396 103 ntBASIC1.14□□□□□ -2.23
EBF3Q9H4W6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
EBF3Q9H4W6 AC023934.1-201ENST00000574529 2389 ntBASIC1.13□□□□□ -2.23
EBF3Q9H4W6 Y_RNA.13-201ENST00000362403 112 ntBASIC1.13□□□□□ -2.23
EBF3Q9H4W6 RNU6-369P-201ENST00000362515 102 ntBASIC1.13□□□□□ -2.23
EBF3Q9H4W6 SNORA80D-201ENST00000384488 135 ntBASIC1.13□□□□□ -2.23
EBF3Q9H4W6 SNORA72.6-201ENST00000384520 129 ntBASIC1.13□□□□□ -2.23
EBF3Q9H4W6 MIR618-201ENST00000385287 98 ntBASIC1.13□□□□□ -2.23
EBF3Q9H4W6 RNA5SP292-201ENST00000390974 118 ntBASIC1.13□□□□□ -2.23
EBF3Q9H4W6 SNORD63B-201ENST00000411005 70 ntBASIC1.13□□□□□ -2.23
EBF3Q9H4W6 TRAJ51-201ENST00000504127 63 ntBASIC1.13□□□□□ -2.23
EBF3Q9H4W6 RNU6-132P-201ENST00000383863 107 ntBASIC1.12□□□□□ -2.23
EBF3Q9H4W6 SNORD12-201ENST00000391002 90 ntBASIC1.12□□□□□ -2.23
EBF3Q9H4W6 SNORD100-201ENST00000408573 76 ntBASIC1.12□□□□□ -2.23
EBF3Q9H4W6 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
EBF3Q9H4W6 RNU7-21P-201ENST00000459430 62 ntBASIC1.12□□□□□ -2.23
EBF3Q9H4W6 SNORD79.1-201ENST00000516069 84 ntBASIC1.12□□□□□ -2.23
EBF3Q9H4W6 AC023827.1-201ENST00000569247 97 ntBASIC1.12□□□□□ -2.23
EBF3Q9H4W6 MIR4712-201ENST00000583750 82 ntBASIC1.12□□□□□ -2.23
EBF3Q9H4W6 RNU4-58P-201ENST00000363192 141 ntBASIC1.11□□□□□ -2.23
EBF3Q9H4W6 RNU6-957P-201ENST00000363652 99 ntBASIC1.11□□□□□ -2.23
EBF3Q9H4W6 RNU6-478P-201ENST00000363904 110 ntBASIC1.11□□□□□ -2.23
EBF3Q9H4W6 SNORD113.3-201ENST00000364630 78 ntBASIC1.11□□□□□ -2.23
EBF3Q9H4W6 RNU6-910P-201ENST00000390844 107 ntBASIC1.11□□□□□ -2.23
EBF3Q9H4W6 RNU6-1254P-201ENST00000391266 104 ntBASIC1.11□□□□□ -2.23
EBF3Q9H4W6 AL606490.4-201ENST00000423117 127 ntBASIC1.11□□□□□ -2.23
EBF3Q9H4W6 SNORA25.13-201ENST00000516395 103 ntBASIC1.11□□□□□ -2.23
EBF3Q9H4W6 RNU7-40P-201ENST00000516397 64 ntBASIC1.11□□□□□ -2.23
EBF3Q9H4W6 MIR6082-201ENST00000613604 109 ntBASIC1.11□□□□□ -2.23
EBF3Q9H4W6 Y_RNA.42-201ENST00000362660 108 ntBASIC1.1□□□□□ -2.23
EBF3Q9H4W6 Y_RNA.283-201ENST00000364798 112 ntBASIC1.1□□□□□ -2.23
EBF3Q9H4W6 RNU6-934P-201ENST00000365154 107 ntBASIC1.1□□□□□ -2.23
EBF3Q9H4W6 RNU6-24P-201ENST00000384440 107 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 207.3 ms