Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.73□□□□□ -2.29
HIPK3Q9H422 RNU6-412P-201ENST00000516434 106 ntBASIC0.73□□□□□ -2.29
HIPK3Q9H422 RNU6-1006P-201ENST00000516998 103 ntBASIC0.73□□□□□ -2.29
HIPK3Q9H422 MIR6129-201ENST00000616087 109 ntBASIC0.73□□□□□ -2.29
HIPK3Q9H422 uc_338.16-201ENST00000621804 95 ntBASIC0.73□□□□□ -2.29
HIPK3Q9H422 Y_RNA.56-201ENST00000362798 112 ntBASIC0.72□□□□□ -2.29
HIPK3Q9H422 Y_RNA.273-201ENST00000364703 102 ntBASIC0.72□□□□□ -2.29
HIPK3Q9H422 RNU6-110P-201ENST00000384508 104 ntBASIC0.72□□□□□ -2.29
HIPK3Q9H422 SNORA31.14-201ENST00000516728 116 ntBASIC0.72□□□□□ -2.29
HIPK3Q9H422 MIR5009-201ENST00000578736 100 ntBASIC0.72□□□□□ -2.29
HIPK3Q9H422 AC243829.3-201ENST00000622177 108 ntBASIC0.72□□□□□ -2.29
HIPK3Q9H422 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
HIPK3Q9H422 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.71□□□□□ -2.3
HIPK3Q9H422 Y_RNA.32-201ENST00000362589 110 ntBASIC0.71□□□□□ -2.3
HIPK3Q9H422 Y_RNA.174-201ENST00000363781 105 ntBASIC0.71□□□□□ -2.3
HIPK3Q9H422 Y_RNA.323-201ENST00000365157 109 ntBASIC0.71□□□□□ -2.3
HIPK3Q9H422 RNU4-45P-201ENST00000365469 141 ntBASIC0.71□□□□□ -2.3
HIPK3Q9H422 RNU6-1201P-201ENST00000384227 107 ntBASIC0.71□□□□□ -2.3
HIPK3Q9H422 SNORD38.2-201ENST00000384470 69 ntBASIC0.71□□□□□ -2.3
HIPK3Q9H422 BX276092.1-201ENST00000427368 251 ntBASIC0.71□□□□□ -2.3
HIPK3Q9H422 Y_RNA.247-201ENST00000364500 92 ntBASIC0.7□□□□□ -2.3
HIPK3Q9H422 RNU6-1107P-201ENST00000364817 104 ntBASIC0.7□□□□□ -2.3
HIPK3Q9H422 MIR577-201ENST00000385196 96 ntBASIC0.7□□□□□ -2.3
HIPK3Q9H422 Y_RNA.629-201ENST00000411368 105 ntBASIC0.7□□□□□ -2.3
HIPK3Q9H422 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.7□□□□□ -2.3
HIPK3Q9H422 MIR548AI-201ENST00000579940 88 ntBASIC0.7□□□□□ -2.3
HIPK3Q9H422 MIR548H5-201ENST00000580314 60 ntBASIC0.7□□□□□ -2.3
HIPK3Q9H422 MIR8087-201ENST00000612745 78 ntBASIC0.7□□□□□ -2.3
HIPK3Q9H422 AL442128.1-201ENST00000615151 90 ntBASIC0.7□□□□□ -2.3
HIPK3Q9H422 RNU6-1290P-201ENST00000362957 109 ntBASIC0.69□□□□□ -2.3
HIPK3Q9H422 SNORD38.1-201ENST00000363863 68 ntBASIC0.69□□□□□ -2.3
HIPK3Q9H422 RNA5SP245-201ENST00000364239 121 ntBASIC0.69□□□□□ -2.3
HIPK3Q9H422 Y_RNA.291-201ENST00000364886 113 ntBASIC0.69□□□□□ -2.3
HIPK3Q9H422 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
HIPK3Q9H422 AC098934.3-201ENST00000430450 190 ntBASIC0.69□□□□□ -2.3
HIPK3Q9H422 MIR3678-201ENST00000578455 94 ntBASIC0.69□□□□□ -2.3
HIPK3Q9H422 MIR4694-201ENST00000578534 80 ntBASIC0.69□□□□□ -2.3
HIPK3Q9H422 RNU7-10P-201ENST00000607194 63 ntBASIC0.69□□□□□ -2.3
HIPK3Q9H422 AL109933.3-201ENST00000619095 188 ntBASIC0.69□□□□□ -2.3
HIPK3Q9H422 Y_RNA.377-201ENST00000365644 108 ntBASIC0.68□□□□□ -2.3
HIPK3Q9H422 RNU6-1014P-201ENST00000383940 103 ntBASIC0.68□□□□□ -2.3
HIPK3Q9H422 SNORA36.2-201ENST00000384004 127 ntBASIC0.68□□□□□ -2.3
HIPK3Q9H422 RNU6-571P-201ENST00000384128 107 ntBASIC0.68□□□□□ -2.3
HIPK3Q9H422 MIR644A-201ENST00000385262 94 ntBASIC0.68□□□□□ -2.3
HIPK3Q9H422 AC092628.1-201ENST00000436250 252 ntBASIC0.68□□□□□ -2.3
HIPK3Q9H422 SNRPGP12-201ENST00000449481 213 ntBASIC0.68□□□□□ -2.3
HIPK3Q9H422 RNU6-589P-201ENST00000516485 107 ntBASIC0.68□□□□□ -2.3
HIPK3Q9H422 MTND5P40-201ENST00000559945 246 ntBASIC0.68□□□□□ -2.3
HIPK3Q9H422 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.68□□□□□ -2.3
HIPK3Q9H422 MIR330-201ENST00000362196 94 ntBASIC0.67□□□□□ -2.3
HIPK3Q9H422 RNY3P2-201ENST00000362918 102 ntBASIC0.67□□□□□ -2.3
HIPK3Q9H422 RNU6-832P-201ENST00000363319 107 ntBASIC0.67□□□□□ -2.3
HIPK3Q9H422 RNU6-716P-201ENST00000365621 103 ntBASIC0.67□□□□□ -2.3
HIPK3Q9H422 RNY1P8-201ENST00000383970 114 ntBASIC0.67□□□□□ -2.3
HIPK3Q9H422 MIR635-201ENST00000384830 98 ntBASIC0.67□□□□□ -2.3
HIPK3Q9H422 RNU6-469P-201ENST00000516253 101 ntBASIC0.67□□□□□ -2.3
HIPK3Q9H422 AC138869.1-201ENST00000568623 124 ntBASIC0.67□□□□□ -2.3
HIPK3Q9H422 RNU6-90P-201ENST00000606352 106 ntBASIC0.67□□□□□ -2.3
HIPK3Q9H422 RNU6-1099P-201ENST00000363533 107 ntBASIC0.66□□□□□ -2.3
HIPK3Q9H422 RNA5SP499-201ENST00000363982 119 ntBASIC0.66□□□□□ -2.3
HIPK3Q9H422 MIR548G-201ENST00000408442 89 ntBASIC0.66□□□□□ -2.3
HIPK3Q9H422 SPINT5P-201ENST00000448174 155 ntBASIC0.66□□□□□ -2.3
HIPK3Q9H422 TRAJ51-201ENST00000504127 63 ntBASIC0.66□□□□□ -2.3
HIPK3Q9H422 RNU6-229P-201ENST00000516614 102 ntBASIC0.66□□□□□ -2.3
HIPK3Q9H422 RNU6-850P-201ENST00000516934 103 ntBASIC0.66□□□□□ -2.3
HIPK3Q9H422 Y_RNA.709-201ENST00000516952 92 ntBASIC0.66□□□□□ -2.3
HIPK3Q9H422 RNU6-1325P-201ENST00000364905 105 ntBASIC0.65□□□□□ -2.31
HIPK3Q9H422 MIR140-201ENST00000385282 100 ntBASIC0.65□□□□□ -2.31
HIPK3Q9H422 RNU6-135P-201ENST00000516769 101 ntBASIC0.65□□□□□ -2.31
HIPK3Q9H422 AC096720.1-201ENST00000604441 183 ntBASIC0.65□□□□□ -2.31
HIPK3Q9H422 MIR5087-201ENST00000635826 76 ntBASIC0.65□□□□□ -2.31
HIPK3Q9H422 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
HIPK3Q9H422 RNU6-170P-201ENST00000362832 104 ntBASIC0.64□□□□□ -2.31
HIPK3Q9H422 SNORD18A-201ENST00000363753 72 ntBASIC0.64□□□□□ -2.31
HIPK3Q9H422 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.64□□□□□ -2.31
HIPK3Q9H422 AC244505.6-201ENST00000452829 130 ntBASIC0.64□□□□□ -2.31
HIPK3Q9H422 AC141557.1-201ENST00000540982 400 ntBASIC0.64□□□□□ -2.31
HIPK3Q9H422 MIR3613-201ENST00000579844 87 ntBASIC0.64□□□□□ -2.31
HIPK3Q9H422 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
HIPK3Q9H422 Y_RNA.173-201ENST00000363776 113 ntBASIC0.63□□□□□ -2.31
HIPK3Q9H422 Y_RNA.342-201ENST00000365352 113 ntBASIC0.63□□□□□ -2.31
HIPK3Q9H422 SNORD63B-201ENST00000411005 70 ntBASIC0.63□□□□□ -2.31
HIPK3Q9H422 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.63□□□□□ -2.31
HIPK3Q9H422 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.63□□□□□ -2.31
HIPK3Q9H422 RNA5SP257-201ENST00000363023 116 ntBASIC0.62□□□□□ -2.31
HIPK3Q9H422 MIR519A1-201ENST00000385257 85 ntBASIC0.62□□□□□ -2.31
HIPK3Q9H422 Y_RNA.681-201ENST00000516445 113 ntBASIC0.62□□□□□ -2.31
HIPK3Q9H422 RNA5SP94-201ENST00000516917 108 ntBASIC0.62□□□□□ -2.31
HIPK3Q9H422 Y_RNA.68-201ENST00000362881 102 ntBASIC0.61□□□□□ -2.31
HIPK3Q9H422 Y_RNA.163-201ENST00000363702 113 ntBASIC0.61□□□□□ -2.31
HIPK3Q9H422 SNORD28-201ENST00000384706 75 ntBASIC0.61□□□□□ -2.31
HIPK3Q9H422 MIR1197-201ENST00000408818 88 ntBASIC0.61□□□□□ -2.31
HIPK3Q9H422 AC097635.1-201ENST00000450678 155 ntBASIC0.61□□□□□ -2.31
HIPK3Q9H422 RNU7-106P-201ENST00000459514 67 ntBASIC0.61□□□□□ -2.31
HIPK3Q9H422 MIR4639-201ENST00000584938 69 ntBASIC0.61□□□□□ -2.31
HIPK3Q9H422 Y_RNA.178-201ENST00000363832 102 ntBASIC0.6□□□□□ -2.31
HIPK3Q9H422 RNU4-36P-201ENST00000364294 144 ntBASIC0.6□□□□□ -2.31
HIPK3Q9H422 RNU6-1163P-201ENST00000364516 107 ntBASIC0.6□□□□□ -2.31
HIPK3Q9H422 RNU6-106P-201ENST00000384405 107 ntBASIC0.6□□□□□ -2.31
HIPK3Q9H422 Y_RNA.567-201ENST00000384736 106 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 216.7 ms