Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RNU6-303P-201ENST00000517091 106 ntBASIC1.58□□□□□ -2.16
VPS11Q9H270 RNU6-165P-201ENST00000517170 99 ntBASIC1.58□□□□□ -2.16
VPS11Q9H270 MIR4255-201ENST00000579351 72 ntBASIC1.58□□□□□ -2.16
VPS11Q9H270 SNORD115-31-201ENST00000365318 82 ntBASIC1.57□□□□□ -2.16
VPS11Q9H270 MIR320A-201ENST00000385302 82 ntBASIC1.57□□□□□ -2.16
VPS11Q9H270 MT-TF-201ENST00000387314 71 ntBASIC1.57□□□□□ -2.16
VPS11Q9H270 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.57□□□□□ -2.16
VPS11Q9H270 RNU6-587P-201ENST00000391282 106 ntBASIC1.57□□□□□ -2.16
VPS11Q9H270 AC108210.2-201ENST00000503681 201 ntBASIC1.57□□□□□ -2.16
VPS11Q9H270 TRAJ51-201ENST00000504127 63 ntBASIC1.57□□□□□ -2.16
VPS11Q9H270 RNU6-1194P-201ENST00000516208 104 ntBASIC1.57□□□□□ -2.16
VPS11Q9H270 RNU11-2P-201ENST00000516898 142 ntBASIC1.57□□□□□ -2.16
VPS11Q9H270 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.57□□□□□ -2.16
VPS11Q9H270 AC015712.3-201ENST00000559380 164 ntBASIC1.57□□□□□ -2.16
VPS11Q9H270 MIR1297-201ENST00000637311 77 ntBASIC1.57□□□□□ -2.16
VPS11Q9H270 RNU5F-1-201ENST00000362507 117 ntBASIC1.56□□□□□ -2.16
VPS11Q9H270 MIR548U-201ENST00000390728 81 ntBASIC1.56□□□□□ -2.16
VPS11Q9H270 SNORA26.9-201ENST00000391322 122 ntBASIC1.56□□□□□ -2.16
VPS11Q9H270 SNORD100-201ENST00000408573 76 ntBASIC1.56□□□□□ -2.16
VPS11Q9H270 Y_RNA.596-201ENST00000410462 109 ntBASIC1.56□□□□□ -2.16
VPS11Q9H270 RNU7-195P-201ENST00000458793 62 ntBASIC1.56□□□□□ -2.16
VPS11Q9H270 AC125388.1-201ENST00000459631 156 ntBASIC1.56□□□□□ -2.16
VPS11Q9H270 Y_RNA.681-201ENST00000516445 113 ntBASIC1.56□□□□□ -2.16
VPS11Q9H270 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.56□□□□□ -2.16
VPS11Q9H270 Y_RNA.12-201ENST00000362393 112 ntBASIC1.55□□□□□ -2.16
VPS11Q9H270 RNA5SP432-201ENST00000362480 116 ntBASIC1.55□□□□□ -2.16
VPS11Q9H270 SNORD26-201ENST00000384147 75 ntBASIC1.55□□□□□ -2.16
VPS11Q9H270 RNU6-1241P-201ENST00000384536 107 ntBASIC1.55□□□□□ -2.16
VPS11Q9H270 MIR2115-201ENST00000516657 100 ntBASIC1.55□□□□□ -2.16
VPS11Q9H270 ZNF209P-201ENST00000593450 2304 ntBASIC1.55□□□□□ -2.16
VPS11Q9H270 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.54□□□□□ -2.16
VPS11Q9H270 MIR377-201ENST00000362145 69 ntBASIC1.54□□□□□ -2.16
VPS11Q9H270 Y_RNA.264-201ENST00000364665 102 ntBASIC1.54□□□□□ -2.16
VPS11Q9H270 RNU1-36P-201ENST00000365130 165 ntBASIC1.54□□□□□ -2.16
VPS11Q9H270 RNU6-580P-201ENST00000365159 107 ntBASIC1.54□□□□□ -2.16
VPS11Q9H270 RNU6-1051P-201ENST00000365471 102 ntBASIC1.54□□□□□ -2.16
VPS11Q9H270 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
VPS11Q9H270 snoU13.21-201ENST00000459368 105 ntBASIC1.54□□□□□ -2.16
VPS11Q9H270 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.54□□□□□ -2.16
VPS11Q9H270 U6.100-201ENST00000636230 99 ntBASIC1.54□□□□□ -2.16
VPS11Q9H270 RNU4-58P-201ENST00000363192 141 ntBASIC1.53□□□□□ -2.16
VPS11Q9H270 Y_RNA.205-201ENST00000364128 113 ntBASIC1.53□□□□□ -2.16
VPS11Q9H270 RNU6-154P-201ENST00000384306 106 ntBASIC1.53□□□□□ -2.16
VPS11Q9H270 RNU6-649P-201ENST00000384463 107 ntBASIC1.53□□□□□ -2.16
VPS11Q9H270 Y_RNA.536-201ENST00000384621 113 ntBASIC1.53□□□□□ -2.16
VPS11Q9H270 RNU6-955P-201ENST00000410497 104 ntBASIC1.53□□□□□ -2.16
VPS11Q9H270 RPS29P23-201ENST00000458635 123 ntBASIC1.53□□□□□ -2.16
VPS11Q9H270 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.53□□□□□ -2.16
VPS11Q9H270 RNU6-947P-201ENST00000516264 106 ntBASIC1.53□□□□□ -2.16
VPS11Q9H270 SNORA25.15-201ENST00000516487 89 ntBASIC1.53□□□□□ -2.16
VPS11Q9H270 YWHAEP2-201ENST00000580066 112 ntBASIC1.53□□□□□ -2.16
VPS11Q9H270 YWHAEP3-201ENST00000582767 121 ntBASIC1.53□□□□□ -2.16
VPS11Q9H270 MIR3140-201ENST00000583685 90 ntBASIC1.53□□□□□ -2.16
VPS11Q9H270 AC013244.2-201ENST00000603396 103 ntBASIC1.53□□□□□ -2.16
VPS11Q9H270 BX248123.2-201ENST00000606318 124 ntBASIC1.53□□□□□ -2.16
VPS11Q9H270 TRDV1-202ENST00000621643 102 ntBASIC1.53□□□□□ -2.16
VPS11Q9H270 U6.111-201ENST00000636093 83 ntBASIC1.53□□□□□ -2.16
VPS11Q9H270 Y_RNA.36-201ENST00000362602 112 ntBASIC1.52□□□□□ -2.17
VPS11Q9H270 RNA5SP99-201ENST00000364020 114 ntBASIC1.52□□□□□ -2.17
VPS11Q9H270 RNU1-42P-201ENST00000364033 160 ntBASIC1.52□□□□□ -2.17
VPS11Q9H270 Y_RNA.207-201ENST00000364142 106 ntBASIC1.52□□□□□ -2.17
VPS11Q9H270 MIR519A1-201ENST00000385257 85 ntBASIC1.52□□□□□ -2.17
VPS11Q9H270 MIR942-201ENST00000401111 86 ntBASIC1.52□□□□□ -2.17
VPS11Q9H270 SNORD93-201ENST00000408813 74 ntBASIC1.52□□□□□ -2.17
VPS11Q9H270 RNU6-1054P-201ENST00000411293 104 ntBASIC1.52□□□□□ -2.17
VPS11Q9H270 MIR4769-201ENST00000584126 77 ntBASIC1.52□□□□□ -2.17
VPS11Q9H270 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.52□□□□□ -2.17
VPS11Q9H270 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
VPS11Q9H270 Y_RNA.42-201ENST00000362660 108 ntBASIC1.51□□□□□ -2.17
VPS11Q9H270 RNU6-403P-201ENST00000363163 104 ntBASIC1.51□□□□□ -2.17
VPS11Q9H270 RNU6-800P-201ENST00000384473 103 ntBASIC1.51□□□□□ -2.17
VPS11Q9H270 RNU6-291P-201ENST00000384720 107 ntBASIC1.51□□□□□ -2.17
VPS11Q9H270 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.51□□□□□ -2.17
VPS11Q9H270 SNORD30.1-201ENST00000391309 70 ntBASIC1.51□□□□□ -2.17
VPS11Q9H270 RNU6-237P-201ENST00000515985 71 ntBASIC1.51□□□□□ -2.17
VPS11Q9H270 MIR4696-201ENST00000581431 70 ntBASIC1.51□□□□□ -2.17
VPS11Q9H270 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS11Q9H270 AL353997.5-201ENST00000618886 171 ntBASIC1.51□□□□□ -2.17
VPS11Q9H270 MIR103A2-201ENST00000362154 78 ntBASIC1.5□□□□□ -2.17
VPS11Q9H270 RNA5SP264-201ENST00000363115 107 ntBASIC1.5□□□□□ -2.17
VPS11Q9H270 SNORA24B-201ENST00000384176 131 ntBASIC1.5□□□□□ -2.17
VPS11Q9H270 MIR1323-201ENST00000408090 73 ntBASIC1.5□□□□□ -2.17
VPS11Q9H270 AL133373.1-201ENST00000497098 94 ntBASIC1.5□□□□□ -2.17
VPS11Q9H270 RNU7-156P-201ENST00000517214 74 ntBASIC1.5□□□□□ -2.17
VPS11Q9H270 MTRNR2L2-201ENST00000604882 87 ntBASIC1.5□□□□□ -2.17
VPS11Q9H270 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.5□□□□□ -2.17
VPS11Q9H270 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VPS11Q9H270 Y_RNA.13-201ENST00000362403 112 ntBASIC1.49□□□□□ -2.17
VPS11Q9H270 RNU6-1260P-201ENST00000362944 107 ntBASIC1.49□□□□□ -2.17
VPS11Q9H270 RNU6-340P-201ENST00000364005 107 ntBASIC1.49□□□□□ -2.17
VPS11Q9H270 RNU6-53P-201ENST00000365367 106 ntBASIC1.49□□□□□ -2.17
VPS11Q9H270 SNORA8.1-201ENST00000384250 140 ntBASIC1.49□□□□□ -2.17
VPS11Q9H270 RNU2-59P-201ENST00000410482 191 ntBASIC1.49□□□□□ -2.17
VPS11Q9H270 AC092628.1-201ENST00000436250 252 ntBASIC1.49□□□□□ -2.17
VPS11Q9H270 Y_RNA.809-201ENST00000516058 95 ntBASIC1.49□□□□□ -2.17
VPS11Q9H270 Y_RNA.371-201ENST00000365591 113 ntBASIC1.48□□□□□ -2.17
VPS11Q9H270 RNU6-663P-201ENST00000391105 106 ntBASIC1.48□□□□□ -2.17
VPS11Q9H270 MIR18B-201ENST00000454574 71 ntBASIC1.48□□□□□ -2.17
VPS11Q9H270 RNU7-185P-201ENST00000459215 60 ntBASIC1.48□□□□□ -2.17
VPS11Q9H270 MIR7974-201ENST00000615835 79 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms