Protein–RNA interactions for Protein: Q9GZT8

NIF3L1, NIF3-like protein 1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1Q9GZT8 RNU6-509P-201ENST00000363519 107 ntBASIC1.55□□□□□ -2.16
NIF3L1Q9GZT8 RNU6-482P-201ENST00000391068 107 ntBASIC1.55□□□□□ -2.16
NIF3L1Q9GZT8 U7.7-201ENST00000459276 60 ntBASIC1.55□□□□□ -2.16
NIF3L1Q9GZT8 Y_RNA.809-201ENST00000516058 95 ntBASIC1.55□□□□□ -2.16
NIF3L1Q9GZT8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.55□□□□□ -2.16
NIF3L1Q9GZT8 RMST_2.1-201ENST00000617263 136 ntBASIC1.55□□□□□ -2.16
NIF3L1Q9GZT8 Y_RNA.4-201ENST00000362333 112 ntBASIC1.54□□□□□ -2.16
NIF3L1Q9GZT8 RNU6-497P-201ENST00000365316 104 ntBASIC1.54□□□□□ -2.16
NIF3L1Q9GZT8 RNU6-291P-201ENST00000384720 107 ntBASIC1.54□□□□□ -2.16
NIF3L1Q9GZT8 RNU7-195P-201ENST00000458793 62 ntBASIC1.54□□□□□ -2.16
NIF3L1Q9GZT8 AC022137.1-201ENST00000483735 151 ntBASIC1.54□□□□□ -2.16
NIF3L1Q9GZT8 RNA5SP173-201ENST00000364857 136 ntBASIC1.53□□□□□ -2.16
NIF3L1Q9GZT8 AC097635.1-201ENST00000450678 155 ntBASIC1.53□□□□□ -2.16
NIF3L1Q9GZT8 RNU7-85P-201ENST00000458851 63 ntBASIC1.53□□□□□ -2.16
NIF3L1Q9GZT8 AC019288.1-201ENST00000557918 224 ntBASIC1.53□□□□□ -2.16
NIF3L1Q9GZT8 SNORA25.8-201ENST00000364831 128 ntBASIC1.52□□□□□ -2.17
NIF3L1Q9GZT8 RNU6-242P-201ENST00000384359 107 ntBASIC1.52□□□□□ -2.17
NIF3L1Q9GZT8 RNU6-466P-201ENST00000391224 103 ntBASIC1.52□□□□□ -2.17
NIF3L1Q9GZT8 snoU13.11-201ENST00000459219 104 ntBASIC1.52□□□□□ -2.17
NIF3L1Q9GZT8 MIR4536-1-201ENST00000583537 88 ntBASIC1.52□□□□□ -2.17
NIF3L1Q9GZT8 AL157834.3-201ENST00000615543 103 ntBASIC1.52□□□□□ -2.17
NIF3L1Q9GZT8 Y_RNA.174-201ENST00000363781 105 ntBASIC1.51□□□□□ -2.17
NIF3L1Q9GZT8 RNU1-124P-201ENST00000363861 145 ntBASIC1.51□□□□□ -2.17
NIF3L1Q9GZT8 Y_RNA.283-201ENST00000364798 112 ntBASIC1.51□□□□□ -2.17
NIF3L1Q9GZT8 MIR519C-201ENST00000385053 87 ntBASIC1.51□□□□□ -2.17
NIF3L1Q9GZT8 SNORD89-201ENST00000390981 114 ntBASIC1.51□□□□□ -2.17
NIF3L1Q9GZT8 RNU4-62P-201ENST00000410125 130 ntBASIC1.51□□□□□ -2.17
NIF3L1Q9GZT8 AC108667.1-201ENST00000428618 249 ntBASIC1.51□□□□□ -2.17
NIF3L1Q9GZT8 RNU6-65P-201ENST00000516332 98 ntBASIC1.51□□□□□ -2.17
NIF3L1Q9GZT8 RNA5SP404-201ENST00000517118 132 ntBASIC1.51□□□□□ -2.17
NIF3L1Q9GZT8 MIR5588-201ENST00000581890 63 ntBASIC1.51□□□□□ -2.17
NIF3L1Q9GZT8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.51□□□□□ -2.17
NIF3L1Q9GZT8 Y_RNA.73-201ENST00000362910 113 ntBASIC1.5□□□□□ -2.17
NIF3L1Q9GZT8 Y_RNA.191-201ENST00000363972 113 ntBASIC1.5□□□□□ -2.17
NIF3L1Q9GZT8 RNU6-979P-201ENST00000383896 107 ntBASIC1.5□□□□□ -2.17
NIF3L1Q9GZT8 MIR520H-201ENST00000385126 88 ntBASIC1.5□□□□□ -2.17
NIF3L1Q9GZT8 MIR1236-201ENST00000408340 102 ntBASIC1.5□□□□□ -2.17
NIF3L1Q9GZT8 MIR4769-201ENST00000584126 77 ntBASIC1.5□□□□□ -2.17
NIF3L1Q9GZT8 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.5□□□□□ -2.17
NIF3L1Q9GZT8 MIR548BB-201ENST00000626714 66 ntBASIC1.5□□□□□ -2.17
NIF3L1Q9GZT8 MIR26B-201ENST00000362251 77 ntBASIC1.49□□□□□ -2.17
NIF3L1Q9GZT8 Y_RNA.426-201ENST00000384068 113 ntBASIC1.49□□□□□ -2.17
NIF3L1Q9GZT8 MIR942-201ENST00000401111 86 ntBASIC1.49□□□□□ -2.17
NIF3L1Q9GZT8 RNU6-592P-201ENST00000411333 103 ntBASIC1.49□□□□□ -2.17
NIF3L1Q9GZT8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.49□□□□□ -2.17
NIF3L1Q9GZT8 ZNF209P-201ENST00000593450 2304 ntBASIC1.49□□□□□ -2.17
NIF3L1Q9GZT8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
NIF3L1Q9GZT8 RNA5SP245-201ENST00000364239 121 ntBASIC1.48□□□□□ -2.17
NIF3L1Q9GZT8 SNORD114-24-201ENST00000365029 72 ntBASIC1.48□□□□□ -2.17
NIF3L1Q9GZT8 RNU6-1276P-201ENST00000365372 104 ntBASIC1.48□□□□□ -2.17
NIF3L1Q9GZT8 MIR599-201ENST00000385069 95 ntBASIC1.48□□□□□ -2.17
NIF3L1Q9GZT8 SNORD105-201ENST00000386910 85 ntBASIC1.48□□□□□ -2.17
NIF3L1Q9GZT8 Y_RNA.611-201ENST00000410682 108 ntBASIC1.48□□□□□ -2.17
NIF3L1Q9GZT8 AC244505.6-201ENST00000452829 130 ntBASIC1.48□□□□□ -2.17
NIF3L1Q9GZT8 SNORD124-201ENST00000459577 104 ntBASIC1.48□□□□□ -2.17
NIF3L1Q9GZT8 RNA5SP61-201ENST00000516453 100 ntBASIC1.48□□□□□ -2.17
NIF3L1Q9GZT8 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.48□□□□□ -2.17
NIF3L1Q9GZT8 uc_338.16-201ENST00000621804 95 ntBASIC1.48□□□□□ -2.17
NIF3L1Q9GZT8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
NIF3L1Q9GZT8 RNU6-957P-201ENST00000363652 99 ntBASIC1.47□□□□□ -2.17
NIF3L1Q9GZT8 RNU6-573P-201ENST00000383938 106 ntBASIC1.47□□□□□ -2.17
NIF3L1Q9GZT8 MIR618-201ENST00000385287 98 ntBASIC1.47□□□□□ -2.17
NIF3L1Q9GZT8 RNU7-171P-201ENST00000459581 62 ntBASIC1.47□□□□□ -2.17
NIF3L1Q9GZT8 AC025627.3-201ENST00000582078 182 ntBASIC1.47□□□□□ -2.17
NIF3L1Q9GZT8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.47□□□□□ -2.17
NIF3L1Q9GZT8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.17
NIF3L1Q9GZT8 SNORD115-27-201ENST00000364430 82 ntBASIC1.46□□□□□ -2.18
NIF3L1Q9GZT8 RNU6-997P-201ENST00000384725 107 ntBASIC1.46□□□□□ -2.18
NIF3L1Q9GZT8 RNU7-95P-201ENST00000459222 64 ntBASIC1.46□□□□□ -2.18
NIF3L1Q9GZT8 RNU6-75P-201ENST00000515944 104 ntBASIC1.46□□□□□ -2.18
NIF3L1Q9GZT8 RNU1-92P-201ENST00000517017 135 ntBASIC1.46□□□□□ -2.18
NIF3L1Q9GZT8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.46□□□□□ -2.18
NIF3L1Q9GZT8 SNORD115-37-201ENST00000363768 82 ntBASIC1.45□□□□□ -2.18
NIF3L1Q9GZT8 SNORA31.14-201ENST00000516728 116 ntBASIC1.45□□□□□ -2.18
NIF3L1Q9GZT8 MIR4421-201ENST00000578133 69 ntBASIC1.45□□□□□ -2.18
NIF3L1Q9GZT8 AC006160.2-201ENST00000637708 154 ntBASIC1.45□□□□□ -2.18
NIF3L1Q9GZT8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
NIF3L1Q9GZT8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
NIF3L1Q9GZT8 RNU4-32P-201ENST00000363404 141 ntBASIC1.44□□□□□ -2.18
NIF3L1Q9GZT8 Y_RNA.219-201ENST00000364232 113 ntBASIC1.44□□□□□ -2.18
NIF3L1Q9GZT8 RNA5SP117-201ENST00000365294 118 ntBASIC1.44□□□□□ -2.18
NIF3L1Q9GZT8 RNU6-524P-201ENST00000384270 107 ntBASIC1.44□□□□□ -2.18
NIF3L1Q9GZT8 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
NIF3L1Q9GZT8 RNU1-123P-201ENST00000458950 160 ntBASIC1.44□□□□□ -2.18
NIF3L1Q9GZT8 AC002350.1-201ENST00000490759 375 ntBASIC1.44□□□□□ -2.18
NIF3L1Q9GZT8 AC093729.1-201ENST00000513074 128 ntBASIC1.44□□□□□ -2.18
NIF3L1Q9GZT8 TRDV1-202ENST00000621643 102 ntBASIC1.44□□□□□ -2.18
NIF3L1Q9GZT8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.44□□□□□ -2.18
NIF3L1Q9GZT8 RNU6-811P-201ENST00000384069 107 ntBASIC1.43□□□□□ -2.18
NIF3L1Q9GZT8 MIR758-201ENST00000390227 88 ntBASIC1.43□□□□□ -2.18
NIF3L1Q9GZT8 MIR548U-201ENST00000390728 81 ntBASIC1.43□□□□□ -2.18
NIF3L1Q9GZT8 AC004223.1-201ENST00000479840 271 ntBASIC1.43□□□□□ -2.18
NIF3L1Q9GZT8 MIR378A-201ENST00000362177 66 ntBASIC1.42□□□□□ -2.18
NIF3L1Q9GZT8 Y_RNA.32-201ENST00000362589 110 ntBASIC1.42□□□□□ -2.18
NIF3L1Q9GZT8 Y_RNA.508-201ENST00000384502 114 ntBASIC1.42□□□□□ -2.18
NIF3L1Q9GZT8 Y_RNA.607-201ENST00000410597 98 ntBASIC1.42□□□□□ -2.18
NIF3L1Q9GZT8 RNU6-237P-201ENST00000515985 71 ntBASIC1.42□□□□□ -2.18
NIF3L1Q9GZT8 AP1B1P2-201ENST00000416196 106 ntBASIC1.41□□□□□ -2.18
NIF3L1Q9GZT8 RNA5SP458-201ENST00000516188 119 ntBASIC1.41□□□□□ -2.18
NIF3L1Q9GZT8 RNU6-135P-201ENST00000516769 101 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 362 ms