Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNU6-588P-201ENST00000410281 105 ntBASIC-1.56□□□□□ -2.66
UPF3BQ9BZI7 RNU4-69P-201ENST00000410677 143 ntBASIC-1.56□□□□□ -2.66
UPF3BQ9BZI7 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.56□□□□□ -2.66
UPF3BQ9BZI7 RNU6-850P-201ENST00000516934 103 ntBASIC-1.56□□□□□ -2.66
UPF3BQ9BZI7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.56□□□□□ -2.66
UPF3BQ9BZI7 MIR6502-201ENST00000617296 76 ntBASIC-1.56□□□□□ -2.66
UPF3BQ9BZI7 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.57□□□□□ -2.66
UPF3BQ9BZI7 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.57□□□□□ -2.66
UPF3BQ9BZI7 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.57□□□□□ -2.66
UPF3BQ9BZI7 RNU2-4P-201ENST00000606190 192 ntBASIC-1.57□□□□□ -2.66
UPF3BQ9BZI7 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.57□□□□□ -2.66
UPF3BQ9BZI7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.57□□□□□ -2.66
UPF3BQ9BZI7 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.58□□□□□ -2.66
UPF3BQ9BZI7 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.58□□□□□ -2.66
UPF3BQ9BZI7 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.58□□□□□ -2.66
UPF3BQ9BZI7 MIR548E-201ENST00000408287 88 ntBASIC-1.58□□□□□ -2.66
UPF3BQ9BZI7 RNU7-2P-201ENST00000516096 62 ntBASIC-1.58□□□□□ -2.66
UPF3BQ9BZI7 RNU6-762P-201ENST00000517107 102 ntBASIC-1.58□□□□□ -2.66
UPF3BQ9BZI7 AC092794.1-201ENST00000612734 582 ntBASIC-1.58□□□□□ -2.66
UPF3BQ9BZI7 MIR376B-201ENST00000614515 100 ntBASIC-1.58□□□□□ -2.66
UPF3BQ9BZI7 AP000770.2-201ENST00000623694 100 ntBASIC-1.58□□□□□ -2.66
UPF3BQ9BZI7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.59□□□□□ -2.66
UPF3BQ9BZI7 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.59□□□□□ -2.66
UPF3BQ9BZI7 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.59□□□□□ -2.66
UPF3BQ9BZI7 MIR487B-201ENST00000385021 84 ntBASIC-1.59□□□□□ -2.66
UPF3BQ9BZI7 MIR4770-201ENST00000579149 58 ntBASIC-1.59□□□□□ -2.66
UPF3BQ9BZI7 YWHAEP3-201ENST00000582767 121 ntBASIC-1.59□□□□□ -2.66
UPF3BQ9BZI7 AL445584.3-201ENST00000617173 78 ntBASIC-1.59□□□□□ -2.66
UPF3BQ9BZI7 AC087741.2-201ENST00000619415 172 ntBASIC-1.59□□□□□ -2.66
UPF3BQ9BZI7 TRDV1-202ENST00000621643 102 ntBASIC-1.59□□□□□ -2.66
UPF3BQ9BZI7 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.6□□□□□ -2.67
UPF3BQ9BZI7 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.6□□□□□ -2.67
UPF3BQ9BZI7 MIR548F1-201ENST00000408667 84 ntBASIC-1.6□□□□□ -2.67
UPF3BQ9BZI7 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.6□□□□□ -2.67
UPF3BQ9BZI7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.6□□□□□ -2.67
UPF3BQ9BZI7 RNU6-718P-201ENST00000516166 105 ntBASIC-1.6□□□□□ -2.67
UPF3BQ9BZI7 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.6□□□□□ -2.67
UPF3BQ9BZI7 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.6□□□□□ -2.67
UPF3BQ9BZI7 MIR4464-201ENST00000580818 92 ntBASIC-1.6□□□□□ -2.67
UPF3BQ9BZI7 AC009779.6-201ENST00000603972 165 ntBASIC-1.6□□□□□ -2.67
UPF3BQ9BZI7 U6.100-201ENST00000636230 99 ntBASIC-1.6□□□□□ -2.67
UPF3BQ9BZI7 RNU6-690P-201ENST00000365242 106 ntBASIC-1.61□□□□□ -2.67
UPF3BQ9BZI7 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.61□□□□□ -2.67
UPF3BQ9BZI7 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.61□□□□□ -2.67
UPF3BQ9BZI7 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.61□□□□□ -2.67
UPF3BQ9BZI7 RNU6-576P-201ENST00000390854 102 ntBASIC-1.61□□□□□ -2.67
UPF3BQ9BZI7 RNA5SP86-201ENST00000390869 98 ntBASIC-1.61□□□□□ -2.67
UPF3BQ9BZI7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.61□□□□□ -2.67
UPF3BQ9BZI7 SNORD63.1-201ENST00000516178 80 ntBASIC-1.61□□□□□ -2.67
UPF3BQ9BZI7 RNU6-720P-201ENST00000516363 108 ntBASIC-1.61□□□□□ -2.67
UPF3BQ9BZI7 AC084781.2-201ENST00000615568 161 ntBASIC-1.61□□□□□ -2.67
UPF3BQ9BZI7 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.62□□□□□ -2.67
UPF3BQ9BZI7 RNA5SP26-201ENST00000362406 119 ntBASIC-1.62□□□□□ -2.67
UPF3BQ9BZI7 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.62□□□□□ -2.67
UPF3BQ9BZI7 RNU6-337P-201ENST00000391243 106 ntBASIC-1.62□□□□□ -2.67
UPF3BQ9BZI7 RNU6-121P-201ENST00000410525 99 ntBASIC-1.62□□□□□ -2.67
UPF3BQ9BZI7 RNU4-61P-201ENST00000411243 107 ntBASIC-1.62□□□□□ -2.67
UPF3BQ9BZI7 RNU7-152P-201ENST00000458982 64 ntBASIC-1.62□□□□□ -2.67
UPF3BQ9BZI7 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.63□□□□□ -2.67
UPF3BQ9BZI7 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.63□□□□□ -2.67
UPF3BQ9BZI7 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.63□□□□□ -2.67
UPF3BQ9BZI7 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.63□□□□□ -2.67
UPF3BQ9BZI7 SNORD115-23-201ENST00000364461 82 ntBASIC-1.63□□□□□ -2.67
UPF3BQ9BZI7 SNORA63.7-201ENST00000365579 123 ntBASIC-1.63□□□□□ -2.67
UPF3BQ9BZI7 SNORD77B-201ENST00000391112 67 ntBASIC-1.63□□□□□ -2.67
UPF3BQ9BZI7 RNU6-381P-201ENST00000391259 108 ntBASIC-1.63□□□□□ -2.67
UPF3BQ9BZI7 MIR1302-11-201ENST00000408051 138 ntBASIC-1.63□□□□□ -2.67
UPF3BQ9BZI7 MIR1302-9-201ENST00000408365 138 ntBASIC-1.63□□□□□ -2.67
UPF3BQ9BZI7 MIR1302-10-201ENST00000408734 138 ntBASIC-1.63□□□□□ -2.67
UPF3BQ9BZI7 RNA5SP236-201ENST00000516169 116 ntBASIC-1.63□□□□□ -2.67
UPF3BQ9BZI7 MIR1302-2-201ENST00000607096 138 ntBASIC-1.63□□□□□ -2.67
UPF3BQ9BZI7 AC084782.3-201ENST00000612282 578 ntBASIC-1.63□□□□□ -2.67
UPF3BQ9BZI7 MIR548O2-201ENST00000616090 70 ntBASIC-1.63□□□□□ -2.67
UPF3BQ9BZI7 snoR1.1-201ENST00000628177 80 ntBASIC-1.63□□□□□ -2.67
UPF3BQ9BZI7 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.63□□□□□ -2.67
UPF3BQ9BZI7 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.64□□□□□ -2.67
UPF3BQ9BZI7 RNU4-24P-201ENST00000364565 139 ntBASIC-1.64□□□□□ -2.67
UPF3BQ9BZI7 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.64□□□□□ -2.67
UPF3BQ9BZI7 MIR6773-201ENST00000612812 74 ntBASIC-1.64□□□□□ -2.67
UPF3BQ9BZI7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.64□□□□□ -2.67
UPF3BQ9BZI7 AC090574.1-201ENST00000623186 233 ntBASIC-1.64□□□□□ -2.67
UPF3BQ9BZI7 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.65□□□□□ -2.67
UPF3BQ9BZI7 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.65□□□□□ -2.67
UPF3BQ9BZI7 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.65□□□□□ -2.67
UPF3BQ9BZI7 SNORD116-6-201ENST00000384711 96 ntBASIC-1.65□□□□□ -2.67
UPF3BQ9BZI7 MIR216B-201ENST00000390186 82 ntBASIC-1.65□□□□□ -2.67
UPF3BQ9BZI7 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.65□□□□□ -2.67
UPF3BQ9BZI7 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.65□□□□□ -2.67
UPF3BQ9BZI7 AL353803.5-201ENST00000599815 141 ntBASIC-1.65□□□□□ -2.67
UPF3BQ9BZI7 RNU6-228P-201ENST00000362700 106 ntBASIC-1.66□□□□□ -2.68
UPF3BQ9BZI7 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.66□□□□□ -2.68
UPF3BQ9BZI7 MIR548H1-201ENST00000408610 102 ntBASIC-1.66□□□□□ -2.68
UPF3BQ9BZI7 AL161932.1-201ENST00000437408 146 ntBASIC-1.66□□□□□ -2.68
UPF3BQ9BZI7 MIR6888-201ENST00000621977 67 ntBASIC-1.66□□□□□ -2.68
UPF3BQ9BZI7 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.67□□□□□ -2.68
UPF3BQ9BZI7 SNORD18.1-201ENST00000363807 70 ntBASIC-1.67□□□□□ -2.68
UPF3BQ9BZI7 RNU6-704P-201ENST00000364162 103 ntBASIC-1.67□□□□□ -2.68
UPF3BQ9BZI7 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.67□□□□□ -2.68
UPF3BQ9BZI7 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.67□□□□□ -2.68
UPF3BQ9BZI7 MIR29B1-201ENST00000385015 81 ntBASIC-1.67□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms