Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 RNU6-363P-201ENST00000362895 105 ntBASIC0.27□□□□□ -2.37
RSPO3Q9BXY4 SNORD118-201ENST00000363593 134 ntBASIC0.27□□□□□ -2.37
RSPO3Q9BXY4 Y_RNA.174-201ENST00000363781 105 ntBASIC0.27□□□□□ -2.37
RSPO3Q9BXY4 RNU4-67P-201ENST00000364569 141 ntBASIC0.27□□□□□ -2.37
RSPO3Q9BXY4 Y_RNA.261-201ENST00000364631 102 ntBASIC0.27□□□□□ -2.37
RSPO3Q9BXY4 RNU6-865P-201ENST00000364772 107 ntBASIC0.27□□□□□ -2.37
RSPO3Q9BXY4 Y_RNA.362-201ENST00000365518 110 ntBASIC0.27□□□□□ -2.37
RSPO3Q9BXY4 RNU6-81P-201ENST00000365608 104 ntBASIC0.27□□□□□ -2.37
RSPO3Q9BXY4 RNU7-106P-201ENST00000459514 67 ntBASIC0.27□□□□□ -2.37
RSPO3Q9BXY4 RNA5SP285-201ENST00000516619 119 ntBASIC0.27□□□□□ -2.37
RSPO3Q9BXY4 MIR4514-201ENST00000581410 57 ntBASIC0.27□□□□□ -2.37
RSPO3Q9BXY4 AC244669.1-204ENST00000621564 178 ntBASIC0.27□□□□□ -2.37
RSPO3Q9BXY4 MIR6828-201ENST00000636181 60 ntBASIC0.27□□□□□ -2.37
RSPO3Q9BXY4 MIR103A1-201ENST00000362165 78 ntBASIC0.26□□□□□ -2.37
RSPO3Q9BXY4 SNORD44.1-201ENST00000363202 61 ntBASIC0.26□□□□□ -2.37
RSPO3Q9BXY4 RNY4P6-201ENST00000363667 96 ntBASIC0.26□□□□□ -2.37
RSPO3Q9BXY4 RNU6-959P-201ENST00000384671 107 ntBASIC0.26□□□□□ -2.37
RSPO3Q9BXY4 MIR548A1-201ENST00000385041 97 ntBASIC0.26□□□□□ -2.37
RSPO3Q9BXY4 MIR518A1-201ENST00000385068 85 ntBASIC0.26□□□□□ -2.37
RSPO3Q9BXY4 MIR759-201ENST00000390224 91 ntBASIC0.26□□□□□ -2.37
RSPO3Q9BXY4 AC069271.1-201ENST00000445577 156 ntBASIC0.26□□□□□ -2.37
RSPO3Q9BXY4 AC244505.6-201ENST00000452829 130 ntBASIC0.26□□□□□ -2.37
RSPO3Q9BXY4 SNORD33.1-201ENST00000516213 88 ntBASIC0.26□□□□□ -2.37
RSPO3Q9BXY4 RNA5SP268-201ENST00000516828 124 ntBASIC0.26□□□□□ -2.37
RSPO3Q9BXY4 RNU7-161P-201ENST00000517289 62 ntBASIC0.26□□□□□ -2.37
RSPO3Q9BXY4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.26□□□□□ -2.37
RSPO3Q9BXY4 MIR7107-201ENST00000611489 80 ntBASIC0.26□□□□□ -2.37
RSPO3Q9BXY4 MIRLET7D-201ENST00000362263 87 ntBASIC0.25□□□□□ -2.37
RSPO3Q9BXY4 RNU6-1313P-201ENST00000362622 102 ntBASIC0.25□□□□□ -2.37
RSPO3Q9BXY4 SNORD115-24-201ENST00000363528 82 ntBASIC0.25□□□□□ -2.37
RSPO3Q9BXY4 Y_RNA.346-201ENST00000365385 112 ntBASIC0.25□□□□□ -2.37
RSPO3Q9BXY4 Y_RNA.353-201ENST00000365440 108 ntBASIC0.25□□□□□ -2.37
RSPO3Q9BXY4 SNORD116-14-201ENST00000383894 92 ntBASIC0.25□□□□□ -2.37
RSPO3Q9BXY4 SNORD116-17-201ENST00000383929 92 ntBASIC0.25□□□□□ -2.37
RSPO3Q9BXY4 SNORD116-15-201ENST00000384445 92 ntBASIC0.25□□□□□ -2.37
RSPO3Q9BXY4 SNORD116-19-201ENST00000384729 92 ntBASIC0.25□□□□□ -2.37
RSPO3Q9BXY4 RNA5SP299-201ENST00000391203 116 ntBASIC0.25□□□□□ -2.37
RSPO3Q9BXY4 SNORA40.8-201ENST00000411034 126 ntBASIC0.25□□□□□ -2.37
RSPO3Q9BXY4 Y_RNA.649-201ENST00000459077 103 ntBASIC0.25□□□□□ -2.37
RSPO3Q9BXY4 SCARNA16.5-201ENST00000517114 183 ntBASIC0.25□□□□□ -2.37
RSPO3Q9BXY4 AC007012.1-201ENST00000567192 175 ntBASIC0.25□□□□□ -2.37
RSPO3Q9BXY4 MIR4639-201ENST00000584938 69 ntBASIC0.25□□□□□ -2.37
RSPO3Q9BXY4 AL365222.1-201ENST00000614661 98 ntBASIC0.25□□□□□ -2.37
RSPO3Q9BXY4 RNU6-35P-201ENST00000384530 107 ntBASIC0.24□□□□□ -2.37
RSPO3Q9BXY4 MIR635-201ENST00000384830 98 ntBASIC0.24□□□□□ -2.37
RSPO3Q9BXY4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.24□□□□□ -2.37
RSPO3Q9BXY4 RNU6-816P-201ENST00000390914 107 ntBASIC0.24□□□□□ -2.37
RSPO3Q9BXY4 RNU6-1268P-201ENST00000391214 107 ntBASIC0.24□□□□□ -2.37
RSPO3Q9BXY4 RNU6-1239P-201ENST00000391310 107 ntBASIC0.24□□□□□ -2.37
RSPO3Q9BXY4 SNORD63B-201ENST00000411005 70 ntBASIC0.24□□□□□ -2.37
RSPO3Q9BXY4 SNRPGP12-201ENST00000449481 213 ntBASIC0.24□□□□□ -2.37
RSPO3Q9BXY4 RNU7-195P-201ENST00000458793 62 ntBASIC0.24□□□□□ -2.37
RSPO3Q9BXY4 RNU6-1333P-201ENST00000516162 93 ntBASIC0.24□□□□□ -2.37
RSPO3Q9BXY4 RNU6-469P-201ENST00000516253 101 ntBASIC0.24□□□□□ -2.37
RSPO3Q9BXY4 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
RSPO3Q9BXY4 RNA5SP476-201ENST00000516613 103 ntBASIC0.24□□□□□ -2.37
RSPO3Q9BXY4 RNU6-850P-201ENST00000516934 103 ntBASIC0.24□□□□□ -2.37
RSPO3Q9BXY4 MIR3613-201ENST00000579844 87 ntBASIC0.24□□□□□ -2.37
RSPO3Q9BXY4 MIR548H5-201ENST00000580314 60 ntBASIC0.24□□□□□ -2.37
RSPO3Q9BXY4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.24□□□□□ -2.37
RSPO3Q9BXY4 AL162726.3-218ENST00000636401 95 ntBASIC0.24□□□□□ -2.37
RSPO3Q9BXY4 Y_RNA.35-201ENST00000362601 101 ntBASIC0.23□□□□□ -2.37
RSPO3Q9BXY4 RNA5SP403-201ENST00000363598 108 ntBASIC0.23□□□□□ -2.37
RSPO3Q9BXY4 Y_RNA.221-201ENST00000364248 96 ntBASIC0.23□□□□□ -2.37
RSPO3Q9BXY4 RNU6-726P-201ENST00000364680 107 ntBASIC0.23□□□□□ -2.37
RSPO3Q9BXY4 RNU6-409P-201ENST00000384114 104 ntBASIC0.23□□□□□ -2.37
RSPO3Q9BXY4 MIR516A2-201ENST00000384888 90 ntBASIC0.23□□□□□ -2.37
RSPO3Q9BXY4 MIR329-2-201ENST00000385029 84 ntBASIC0.23□□□□□ -2.37
RSPO3Q9BXY4 MIR516A1-201ENST00000385033 90 ntBASIC0.23□□□□□ -2.37
RSPO3Q9BXY4 MIR548I2-201ENST00000408348 149 ntBASIC0.23□□□□□ -2.37
RSPO3Q9BXY4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.23□□□□□ -2.37
RSPO3Q9BXY4 RPL39P34-201ENST00000477141 156 ntBASIC0.23□□□□□ -2.37
RSPO3Q9BXY4 RNU6-863P-201ENST00000515989 104 ntBASIC0.23□□□□□ -2.37
RSPO3Q9BXY4 AC138869.1-201ENST00000568623 124 ntBASIC0.23□□□□□ -2.37
RSPO3Q9BXY4 MIR4679-2-201ENST00000578358 77 ntBASIC0.23□□□□□ -2.37
RSPO3Q9BXY4 RNU1-29P-201ENST00000606574 126 ntBASIC0.23□□□□□ -2.37
RSPO3Q9BXY4 AL512310.12-203ENST00000640543 90 ntBASIC0.23□□□□□ -2.37
RSPO3Q9BXY4 Y_RNA.155-201ENST00000363632 101 ntBASIC0.22□□□□□ -2.37
RSPO3Q9BXY4 RNU6-1201P-201ENST00000384227 107 ntBASIC0.22□□□□□ -2.37
RSPO3Q9BXY4 Y_RNA.563-201ENST00000384707 108 ntBASIC0.22□□□□□ -2.37
RSPO3Q9BXY4 MIR599-201ENST00000385069 95 ntBASIC0.22□□□□□ -2.37
RSPO3Q9BXY4 MIR577-201ENST00000385196 96 ntBASIC0.22□□□□□ -2.37
RSPO3Q9BXY4 RNA5SP227-201ENST00000516184 113 ntBASIC0.22□□□□□ -2.37
RSPO3Q9BXY4 RNU6-1018P-201ENST00000516577 106 ntBASIC0.22□□□□□ -2.37
RSPO3Q9BXY4 MIR4752-201ENST00000579672 72 ntBASIC0.22□□□□□ -2.37
RSPO3Q9BXY4 MIR3910-1-201ENST00000580936 111 ntBASIC0.22□□□□□ -2.37
RSPO3Q9BXY4 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
RSPO3Q9BXY4 MIR6755-201ENST00000619993 66 ntBASIC0.22□□□□□ -2.37
RSPO3Q9BXY4 RNU6-170P-201ENST00000362832 104 ntBASIC0.21□□□□□ -2.38
RSPO3Q9BXY4 Y_RNA.173-201ENST00000363776 113 ntBASIC0.21□□□□□ -2.38
RSPO3Q9BXY4 RNU6-1229P-201ENST00000364295 107 ntBASIC0.21□□□□□ -2.38
RSPO3Q9BXY4 Y_RNA.342-201ENST00000365352 113 ntBASIC0.21□□□□□ -2.38
RSPO3Q9BXY4 RNU6-571P-201ENST00000384128 107 ntBASIC0.21□□□□□ -2.38
RSPO3Q9BXY4 MIR519A1-201ENST00000385257 85 ntBASIC0.21□□□□□ -2.38
RSPO3Q9BXY4 RNU6-1232P-201ENST00000516299 86 ntBASIC0.21□□□□□ -2.38
RSPO3Q9BXY4 RNU6-135P-201ENST00000516769 101 ntBASIC0.21□□□□□ -2.38
RSPO3Q9BXY4 AC068339.1-201ENST00000526965 141 ntBASIC0.21□□□□□ -2.38
RSPO3Q9BXY4 AL442128.1-201ENST00000615151 90 ntBASIC0.21□□□□□ -2.38
RSPO3Q9BXY4 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.21□□□□□ -2.38
RSPO3Q9BXY4 AC091304.10-201ENST00000641554 121 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 314 ms