Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RNA5SP62-201ENST00000363457 110 ntBASIC1.43□□□□□ -2.18
LRFN3Q9BTN0 RNU6-1125P-201ENST00000363601 107 ntBASIC1.43□□□□□ -2.18
LRFN3Q9BTN0 Y_RNA.426-201ENST00000384068 113 ntBASIC1.43□□□□□ -2.18
LRFN3Q9BTN0 RNU6-480P-201ENST00000384332 107 ntBASIC1.43□□□□□ -2.18
LRFN3Q9BTN0 RNU6-910P-201ENST00000390844 107 ntBASIC1.43□□□□□ -2.18
LRFN3Q9BTN0 RNU6-205P-201ENST00000390858 107 ntBASIC1.43□□□□□ -2.18
LRFN3Q9BTN0 AC036111.3-201ENST00000526389 112 ntBASIC1.43□□□□□ -2.18
LRFN3Q9BTN0 AC138749.4-201ENST00000563970 127 ntBASIC1.43□□□□□ -2.18
LRFN3Q9BTN0 AC090897.1-201ENST00000580909 226 ntBASIC1.43□□□□□ -2.18
LRFN3Q9BTN0 MIR4264-201ENST00000583520 66 ntBASIC1.43□□□□□ -2.18
LRFN3Q9BTN0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.43□□□□□ -2.18
LRFN3Q9BTN0 MIR548BB-201ENST00000626714 66 ntBASIC1.43□□□□□ -2.18
LRFN3Q9BTN0 Y_RNA.168-201ENST00000363740 102 ntBASIC1.42□□□□□ -2.18
LRFN3Q9BTN0 Y_RNA.313-201ENST00000365095 103 ntBASIC1.42□□□□□ -2.18
LRFN3Q9BTN0 Y_RNA.437-201ENST00000384113 113 ntBASIC1.42□□□□□ -2.18
LRFN3Q9BTN0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
LRFN3Q9BTN0 MIR1185-1-201ENST00000408598 86 ntBASIC1.42□□□□□ -2.18
LRFN3Q9BTN0 RNA5SP121-201ENST00000516537 101 ntBASIC1.42□□□□□ -2.18
LRFN3Q9BTN0 AP000753.3-201ENST00000604083 169 ntBASIC1.42□□□□□ -2.18
LRFN3Q9BTN0 MIR6516-201ENST00000630554 81 ntBASIC1.42□□□□□ -2.18
LRFN3Q9BTN0 AC006160.2-201ENST00000637708 154 ntBASIC1.42□□□□□ -2.18
LRFN3Q9BTN0 SNORA25.8-201ENST00000364831 128 ntBASIC1.41□□□□□ -2.18
LRFN3Q9BTN0 SNORA25-201ENST00000384384 134 ntBASIC1.41□□□□□ -2.18
LRFN3Q9BTN0 MT-TN-201ENST00000387400 73 ntBASIC1.41□□□□□ -2.18
LRFN3Q9BTN0 RNU6-1165P-201ENST00000410119 107 ntBASIC1.41□□□□□ -2.18
LRFN3Q9BTN0 AL161932.1-201ENST00000437408 146 ntBASIC1.41□□□□□ -2.18
LRFN3Q9BTN0 MIR4500-201ENST00000579472 76 ntBASIC1.41□□□□□ -2.18
LRFN3Q9BTN0 uc_338.6-201ENST00000613544 171 ntBASIC1.41□□□□□ -2.18
LRFN3Q9BTN0 U6.109-201ENST00000636749 87 ntBASIC1.41□□□□□ -2.18
LRFN3Q9BTN0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
LRFN3Q9BTN0 RNA5SP133-201ENST00000363368 119 ntBASIC1.4□□□□□ -2.19
LRFN3Q9BTN0 SNORD115-27-201ENST00000364430 82 ntBASIC1.4□□□□□ -2.19
LRFN3Q9BTN0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
LRFN3Q9BTN0 MIR1304-201ENST00000408243 91 ntBASIC1.4□□□□□ -2.19
LRFN3Q9BTN0 SNRPGP12-201ENST00000449481 213 ntBASIC1.4□□□□□ -2.19
LRFN3Q9BTN0 RNU7-62P-201ENST00000458856 62 ntBASIC1.4□□□□□ -2.19
LRFN3Q9BTN0 RNU7-90P-201ENST00000459216 62 ntBASIC1.4□□□□□ -2.19
LRFN3Q9BTN0 AL109933.3-201ENST00000619095 188 ntBASIC1.4□□□□□ -2.19
LRFN3Q9BTN0 RNA5SP327-201ENST00000362494 101 ntBASIC1.39□□□□□ -2.19
LRFN3Q9BTN0 Y_RNA.119-201ENST00000363301 96 ntBASIC1.39□□□□□ -2.19
LRFN3Q9BTN0 SNORD48-201ENST00000364953 64 ntBASIC1.39□□□□□ -2.19
LRFN3Q9BTN0 RNU4-83P-201ENST00000410863 133 ntBASIC1.39□□□□□ -2.19
LRFN3Q9BTN0 SNORD79.1-201ENST00000516069 84 ntBASIC1.39□□□□□ -2.19
LRFN3Q9BTN0 MIR8066-201ENST00000617280 78 ntBASIC1.39□□□□□ -2.19
LRFN3Q9BTN0 RNU6-654P-201ENST00000364373 107 ntBASIC1.38□□□□□ -2.19
LRFN3Q9BTN0 RNU6-35P-201ENST00000384530 107 ntBASIC1.38□□□□□ -2.19
LRFN3Q9BTN0 RNU6-279P-201ENST00000391297 101 ntBASIC1.38□□□□□ -2.19
LRFN3Q9BTN0 RNU7-21P-201ENST00000459430 62 ntBASIC1.38□□□□□ -2.19
LRFN3Q9BTN0 RNU6-850P-201ENST00000516934 103 ntBASIC1.38□□□□□ -2.19
LRFN3Q9BTN0 RNA5SP330-201ENST00000517096 96 ntBASIC1.38□□□□□ -2.19
LRFN3Q9BTN0 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.38□□□□□ -2.19
LRFN3Q9BTN0 AC008163.1-202ENST00000636004 2889 ntBASIC1.37□□□□□ -2.19
LRFN3Q9BTN0 MIR377-201ENST00000362145 69 ntBASIC1.37□□□□□ -2.19
LRFN3Q9BTN0 RNU6-524P-201ENST00000384270 107 ntBASIC1.37□□□□□ -2.19
LRFN3Q9BTN0 MT-TF-201ENST00000387314 71 ntBASIC1.37□□□□□ -2.19
LRFN3Q9BTN0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.37□□□□□ -2.19
LRFN3Q9BTN0 RNA5SP95-201ENST00000410319 137 ntBASIC1.37□□□□□ -2.19
LRFN3Q9BTN0 RNU6-955P-201ENST00000410497 104 ntBASIC1.37□□□□□ -2.19
LRFN3Q9BTN0 BX276092.1-201ENST00000427368 251 ntBASIC1.37□□□□□ -2.19
LRFN3Q9BTN0 AC087499.7-201ENST00000441958 109 ntBASIC1.37□□□□□ -2.19
LRFN3Q9BTN0 AC019288.1-201ENST00000557918 224 ntBASIC1.37□□□□□ -2.19
LRFN3Q9BTN0 MIR3660-201ENST00000584845 100 ntBASIC1.37□□□□□ -2.19
LRFN3Q9BTN0 MIR924-201ENST00000638017 53 ntBASIC1.37□□□□□ -2.19
LRFN3Q9BTN0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
LRFN3Q9BTN0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
LRFN3Q9BTN0 Y_RNA.57-201ENST00000362806 113 ntBASIC1.36□□□□□ -2.19
LRFN3Q9BTN0 RNU6-580P-201ENST00000365159 107 ntBASIC1.36□□□□□ -2.19
LRFN3Q9BTN0 Y_RNA.330-201ENST00000365230 109 ntBASIC1.36□□□□□ -2.19
LRFN3Q9BTN0 RNU6-652P-201ENST00000365488 107 ntBASIC1.36□□□□□ -2.19
LRFN3Q9BTN0 RNU6-571P-201ENST00000384128 107 ntBASIC1.36□□□□□ -2.19
LRFN3Q9BTN0 MIR519C-201ENST00000385053 87 ntBASIC1.36□□□□□ -2.19
LRFN3Q9BTN0 RNU6-519P-201ENST00000410590 108 ntBASIC1.36□□□□□ -2.19
LRFN3Q9BTN0 Y_RNA.607-201ENST00000410597 98 ntBASIC1.36□□□□□ -2.19
LRFN3Q9BTN0 MIR26B-201ENST00000362251 77 ntBASIC1.35□□□□□ -2.19
LRFN3Q9BTN0 Y_RNA.244-201ENST00000364484 109 ntBASIC1.35□□□□□ -2.19
LRFN3Q9BTN0 SNORA40.6-201ENST00000391153 128 ntBASIC1.35□□□□□ -2.19
LRFN3Q9BTN0 AC004223.1-201ENST00000479840 271 ntBASIC1.35□□□□□ -2.19
LRFN3Q9BTN0 RNU6-857P-201ENST00000515893 110 ntBASIC1.35□□□□□ -2.19
LRFN3Q9BTN0 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.35□□□□□ -2.19
LRFN3Q9BTN0 AC027335.2-201ENST00000624030 375 ntBASIC1.35□□□□□ -2.19
LRFN3Q9BTN0 MIR618-201ENST00000385287 98 ntBASIC1.34□□□□□ -2.19
LRFN3Q9BTN0 SNORA75.2-201ENST00000391138 150 ntBASIC1.34□□□□□ -2.19
LRFN3Q9BTN0 SNORA75.3-201ENST00000391231 150 ntBASIC1.34□□□□□ -2.19
LRFN3Q9BTN0 Y_RNA.588-201ENST00000391254 102 ntBASIC1.34□□□□□ -2.19
LRFN3Q9BTN0 SNORD4B-201ENST00000459083 72 ntBASIC1.34□□□□□ -2.19
LRFN3Q9BTN0 AC093729.1-201ENST00000513074 128 ntBASIC1.34□□□□□ -2.19
LRFN3Q9BTN0 MIR4491-201ENST00000581087 68 ntBASIC1.34□□□□□ -2.19
LRFN3Q9BTN0 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.34□□□□□ -2.19
LRFN3Q9BTN0 AL627230.5-201ENST00000619807 58 ntBASIC1.34□□□□□ -2.19
LRFN3Q9BTN0 Y_RNA.316-201ENST00000365118 111 ntBASIC1.33□□□□□ -2.2
LRFN3Q9BTN0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.33□□□□□ -2.2
LRFN3Q9BTN0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
LRFN3Q9BTN0 SNORD111-201ENST00000408139 94 ntBASIC1.33□□□□□ -2.2
LRFN3Q9BTN0 AC098934.3-201ENST00000430450 190 ntBASIC1.33□□□□□ -2.2
LRFN3Q9BTN0 MIR18B-201ENST00000454574 71 ntBASIC1.33□□□□□ -2.2
LRFN3Q9BTN0 RNU7-85P-201ENST00000458851 63 ntBASIC1.33□□□□□ -2.2
LRFN3Q9BTN0 RNU7-40P-201ENST00000516397 64 ntBASIC1.33□□□□□ -2.2
LRFN3Q9BTN0 RNU7-153P-201ENST00000516455 62 ntBASIC1.33□□□□□ -2.2
LRFN3Q9BTN0 RNU6-531P-201ENST00000516694 104 ntBASIC1.33□□□□□ -2.2
LRFN3Q9BTN0 SNORA25.16-201ENST00000516741 121 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms