Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 Y_RNA.94-201ENST00000363068 106 ntBASIC1.78□□□□□ -2.12
ZKSCAN3Q9BRR0 RPS26P5-201ENST00000418544 335 ntBASIC1.78□□□□□ -2.12
ZKSCAN3Q9BRR0 TRAJ51-201ENST00000504127 63 ntBASIC1.78□□□□□ -2.12
ZKSCAN3Q9BRR0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ZKSCAN3Q9BRR0 Y_RNA.42-201ENST00000362660 108 ntBASIC1.77□□□□□ -2.13
ZKSCAN3Q9BRR0 RNU7-90P-201ENST00000459216 62 ntBASIC1.77□□□□□ -2.13
ZKSCAN3Q9BRR0 RNU6-75P-201ENST00000515944 104 ntBASIC1.77□□□□□ -2.13
ZKSCAN3Q9BRR0 AC023827.1-201ENST00000569247 97 ntBASIC1.77□□□□□ -2.13
ZKSCAN3Q9BRR0 MIR4796-201ENST00000580742 81 ntBASIC1.77□□□□□ -2.13
ZKSCAN3Q9BRR0 RNU6-315P-201ENST00000362666 107 ntBASIC1.76□□□□□ -2.13
ZKSCAN3Q9BRR0 RNU6-1296P-201ENST00000383879 107 ntBASIC1.76□□□□□ -2.13
ZKSCAN3Q9BRR0 MIR548U-201ENST00000390728 81 ntBASIC1.76□□□□□ -2.13
ZKSCAN3Q9BRR0 RNU6-910P-201ENST00000390844 107 ntBASIC1.76□□□□□ -2.13
ZKSCAN3Q9BRR0 RNU6-129P-201ENST00000391022 107 ntBASIC1.76□□□□□ -2.13
ZKSCAN3Q9BRR0 SNORA67.5-201ENST00000391036 107 ntBASIC1.76□□□□□ -2.13
ZKSCAN3Q9BRR0 SNORA67.6-201ENST00000391093 99 ntBASIC1.76□□□□□ -2.13
ZKSCAN3Q9BRR0 AL354695.1-201ENST00000427935 228 ntBASIC1.76□□□□□ -2.13
ZKSCAN3Q9BRR0 AC015818.7-201ENST00000428754 109 ntBASIC1.76□□□□□ -2.13
ZKSCAN3Q9BRR0 RNU7-195P-201ENST00000458793 62 ntBASIC1.76□□□□□ -2.13
ZKSCAN3Q9BRR0 RNU7-40P-201ENST00000516397 64 ntBASIC1.76□□□□□ -2.13
ZKSCAN3Q9BRR0 Y_RNA.697-201ENST00000516776 113 ntBASIC1.76□□□□□ -2.13
ZKSCAN3Q9BRR0 RNU7-156P-201ENST00000517214 74 ntBASIC1.76□□□□□ -2.13
ZKSCAN3Q9BRR0 MIR4676-201ENST00000583078 72 ntBASIC1.76□□□□□ -2.13
ZKSCAN3Q9BRR0 Y_RNA.221-201ENST00000364248 96 ntBASIC1.75□□□□□ -2.13
ZKSCAN3Q9BRR0 AC092628.1-201ENST00000436250 252 ntBASIC1.75□□□□□ -2.13
ZKSCAN3Q9BRR0 Y_RNA.809-201ENST00000516058 95 ntBASIC1.75□□□□□ -2.13
ZKSCAN3Q9BRR0 SNORD79.1-201ENST00000516069 84 ntBASIC1.75□□□□□ -2.13
ZKSCAN3Q9BRR0 AC104996.3-201ENST00000590718 94 ntBASIC1.75□□□□□ -2.13
ZKSCAN3Q9BRR0 MIR4662A-201ENST00000637499 67 ntBASIC1.75□□□□□ -2.13
ZKSCAN3Q9BRR0 RNU6-1260P-201ENST00000362944 107 ntBASIC1.74□□□□□ -2.13
ZKSCAN3Q9BRR0 RNU6-624P-201ENST00000363411 107 ntBASIC1.74□□□□□ -2.13
ZKSCAN3Q9BRR0 RNU6-957P-201ENST00000363652 99 ntBASIC1.74□□□□□ -2.13
ZKSCAN3Q9BRR0 MIR517C-201ENST00000385103 95 ntBASIC1.74□□□□□ -2.13
ZKSCAN3Q9BRR0 RNU6-994P-201ENST00000410507 111 ntBASIC1.74□□□□□ -2.13
ZKSCAN3Q9BRR0 MIR3064-201ENST00000581130 66 ntBASIC1.74□□□□□ -2.13
ZKSCAN3Q9BRR0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.74□□□□□ -2.13
ZKSCAN3Q9BRR0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.74□□□□□ -2.13
ZKSCAN3Q9BRR0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
ZKSCAN3Q9BRR0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
ZKSCAN3Q9BRR0 RNU6-364P-201ENST00000384387 107 ntBASIC1.73□□□□□ -2.13
ZKSCAN3Q9BRR0 MIR938-201ENST00000401216 83 ntBASIC1.73□□□□□ -2.13
ZKSCAN3Q9BRR0 AC097635.1-201ENST00000450678 155 ntBASIC1.73□□□□□ -2.13
ZKSCAN3Q9BRR0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
ZKSCAN3Q9BRR0 MIR320A-201ENST00000385302 82 ntBASIC1.72□□□□□ -2.13
ZKSCAN3Q9BRR0 RNA5SP292-201ENST00000390974 118 ntBASIC1.72□□□□□ -2.13
ZKSCAN3Q9BRR0 RNA5SP458-201ENST00000516188 119 ntBASIC1.72□□□□□ -2.13
ZKSCAN3Q9BRR0 SNORA18.5-201ENST00000516616 101 ntBASIC1.72□□□□□ -2.13
ZKSCAN3Q9BRR0 RNU6-448P-201ENST00000517052 107 ntBASIC1.72□□□□□ -2.13
ZKSCAN3Q9BRR0 SNORA31.24-201ENST00000517232 57 ntBASIC1.72□□□□□ -2.13
ZKSCAN3Q9BRR0 AC138907.6-201ENST00000568401 126 ntBASIC1.72□□□□□ -2.13
ZKSCAN3Q9BRR0 AC138869.1-201ENST00000568623 124 ntBASIC1.72□□□□□ -2.13
ZKSCAN3Q9BRR0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
ZKSCAN3Q9BRR0 RNU6-132P-201ENST00000383863 107 ntBASIC1.71□□□□□ -2.14
ZKSCAN3Q9BRR0 Y_RNA.491-201ENST00000384417 107 ntBASIC1.71□□□□□ -2.14
ZKSCAN3Q9BRR0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.71□□□□□ -2.14
ZKSCAN3Q9BRR0 AL603825.1-201ENST00000438481 80 ntBASIC1.71□□□□□ -2.14
ZKSCAN3Q9BRR0 RNU6-557P-201ENST00000516842 110 ntBASIC1.71□□□□□ -2.14
ZKSCAN3Q9BRR0 AC027335.2-201ENST00000624030 375 ntBASIC1.71□□□□□ -2.14
ZKSCAN3Q9BRR0 SNORD12-201ENST00000391002 90 ntBASIC1.7□□□□□ -2.14
ZKSCAN3Q9BRR0 RNU7-95P-201ENST00000459222 64 ntBASIC1.7□□□□□ -2.14
ZKSCAN3Q9BRR0 FGF7P7-201ENST00000514120 227 ntBASIC1.7□□□□□ -2.14
ZKSCAN3Q9BRR0 SNORA70.22-201ENST00000517160 124 ntBASIC1.7□□□□□ -2.14
ZKSCAN3Q9BRR0 MIR4285-201ENST00000581001 85 ntBASIC1.7□□□□□ -2.14
ZKSCAN3Q9BRR0 TRDV1-202ENST00000621643 102 ntBASIC1.7□□□□□ -2.14
ZKSCAN3Q9BRR0 MIR518E-201ENST00000385252 88 ntBASIC1.69□□□□□ -2.14
ZKSCAN3Q9BRR0 AL450471.1-201ENST00000447509 127 ntBASIC1.69□□□□□ -2.14
ZKSCAN3Q9BRR0 Y_RNA.660-201ENST00000516002 120 ntBASIC1.69□□□□□ -2.14
ZKSCAN3Q9BRR0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.69□□□□□ -2.14
ZKSCAN3Q9BRR0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
ZKSCAN3Q9BRR0 MIR378A-201ENST00000362177 66 ntBASIC1.68□□□□□ -2.14
ZKSCAN3Q9BRR0 MIRLET7F1-201ENST00000362202 87 ntBASIC1.68□□□□□ -2.14
ZKSCAN3Q9BRR0 SNORA63.2-201ENST00000362603 126 ntBASIC1.68□□□□□ -2.14
ZKSCAN3Q9BRR0 RNU6-478P-201ENST00000363904 110 ntBASIC1.68□□□□□ -2.14
ZKSCAN3Q9BRR0 RNU6-776P-201ENST00000364403 104 ntBASIC1.68□□□□□ -2.14
ZKSCAN3Q9BRR0 RNU6-1022P-201ENST00000365049 104 ntBASIC1.68□□□□□ -2.14
ZKSCAN3Q9BRR0 RNU6-535P-201ENST00000384722 107 ntBASIC1.68□□□□□ -2.14
ZKSCAN3Q9BRR0 AP1B1P2-201ENST00000416196 106 ntBASIC1.68□□□□□ -2.14
ZKSCAN3Q9BRR0 RNU7-102P-201ENST00000458948 62 ntBASIC1.68□□□□□ -2.14
ZKSCAN3Q9BRR0 RNU6-977P-201ENST00000516411 103 ntBASIC1.68□□□□□ -2.14
ZKSCAN3Q9BRR0 MIR4804-201ENST00000581683 73 ntBASIC1.68□□□□□ -2.14
ZKSCAN3Q9BRR0 RNU6-1094P-201ENST00000362416 104 ntBASIC1.67□□□□□ -2.14
ZKSCAN3Q9BRR0 RNU6-369P-201ENST00000362515 102 ntBASIC1.67□□□□□ -2.14
ZKSCAN3Q9BRR0 RNU6-291P-201ENST00000384720 107 ntBASIC1.67□□□□□ -2.14
ZKSCAN3Q9BRR0 MIR599-201ENST00000385069 95 ntBASIC1.67□□□□□ -2.14
ZKSCAN3Q9BRR0 MIR100-201ENST00000385259 80 ntBASIC1.67□□□□□ -2.14
ZKSCAN3Q9BRR0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.67□□□□□ -2.14
ZKSCAN3Q9BRR0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
ZKSCAN3Q9BRR0 RNU6-380P-201ENST00000410207 107 ntBASIC1.67□□□□□ -2.14
ZKSCAN3Q9BRR0 AC067940.1-201ENST00000458411 300 ntBASIC1.67□□□□□ -2.14
ZKSCAN3Q9BRR0 RNU1-92P-201ENST00000517017 135 ntBASIC1.67□□□□□ -2.14
ZKSCAN3Q9BRR0 MIR1-1-201ENST00000362147 71 ntBASIC1.66□□□□□ -2.14
ZKSCAN3Q9BRR0 SNORA25.9-201ENST00000365087 128 ntBASIC1.66□□□□□ -2.14
ZKSCAN3Q9BRR0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.66□□□□□ -2.14
ZKSCAN3Q9BRR0 ZNF209P-201ENST00000593450 2304 ntBASIC1.65□□□□□ -2.15
ZKSCAN3Q9BRR0 RNU6-686P-201ENST00000364839 107 ntBASIC1.65□□□□□ -2.15
ZKSCAN3Q9BRR0 RNU1-119P-201ENST00000391122 165 ntBASIC1.65□□□□□ -2.15
ZKSCAN3Q9BRR0 AL606490.4-201ENST00000423117 127 ntBASIC1.65□□□□□ -2.15
ZKSCAN3Q9BRR0 RNA5SP61-201ENST00000516453 100 ntBASIC1.65□□□□□ -2.15
ZKSCAN3Q9BRR0 Y_RNA.239-201ENST00000364444 113 ntBASIC1.64□□□□□ -2.15
ZKSCAN3Q9BRR0 MIR222-201ENST00000384992 110 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms