Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 Y_RNA.694-201ENST00000516677 117 ntBASIC1.11□□□□□ -2.23
PNKPQ96T60 AC103810.7-201ENST00000607821 91 ntBASIC1.11□□□□□ -2.23
PNKPQ96T60 RMST_2.1-201ENST00000617263 136 ntBASIC1.11□□□□□ -2.23
PNKPQ96T60 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
PNKPQ96T60 RNU1-124P-201ENST00000363861 145 ntBASIC1.1□□□□□ -2.23
PNKPQ96T60 RNU6-571P-201ENST00000384128 107 ntBASIC1.1□□□□□ -2.23
PNKPQ96T60 RNU6-939P-201ENST00000384634 107 ntBASIC1.1□□□□□ -2.23
PNKPQ96T60 MIR181B2-201ENST00000385004 89 ntBASIC1.1□□□□□ -2.23
PNKPQ96T60 SNORD100-201ENST00000408573 76 ntBASIC1.1□□□□□ -2.23
PNKPQ96T60 FABP5P4-201ENST00000437203 171 ntBASIC1.1□□□□□ -2.23
PNKPQ96T60 Y_RNA.697-201ENST00000516776 113 ntBASIC1.1□□□□□ -2.23
PNKPQ96T60 Y_RNA.705-201ENST00000516862 110 ntBASIC1.1□□□□□ -2.23
PNKPQ96T60 RNU6-765P-201ENST00000516916 99 ntBASIC1.1□□□□□ -2.23
PNKPQ96T60 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.1□□□□□ -2.23
PNKPQ96T60 U7.3-201ENST00000616123 62 ntBASIC1.1□□□□□ -2.23
PNKPQ96T60 MIR6767-201ENST00000637302 66 ntBASIC1.1□□□□□ -2.23
PNKPQ96T60 Y_RNA.290-201ENST00000364879 114 ntBASIC1.09□□□□□ -2.23
PNKPQ96T60 MIR200A-201ENST00000384875 90 ntBASIC1.09□□□□□ -2.23
PNKPQ96T60 MIR618-201ENST00000385287 98 ntBASIC1.09□□□□□ -2.23
PNKPQ96T60 RPS29P1-201ENST00000465274 159 ntBASIC1.09□□□□□ -2.23
PNKPQ96T60 RNU6-1194P-201ENST00000516208 104 ntBASIC1.09□□□□□ -2.23
PNKPQ96T60 MIR5582-201ENST00000579697 68 ntBASIC1.09□□□□□ -2.23
PNKPQ96T60 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
PNKPQ96T60 MALAT1.1-201ENST00000618249 95 ntBASIC1.09□□□□□ -2.23
PNKPQ96T60 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
PNKPQ96T60 Y_RNA.57-201ENST00000362806 113 ntBASIC1.08□□□□□ -2.24
PNKPQ96T60 RNU6-1131P-201ENST00000364955 107 ntBASIC1.08□□□□□ -2.24
PNKPQ96T60 RNY1P7-201ENST00000384743 110 ntBASIC1.08□□□□□ -2.24
PNKPQ96T60 MIR520H-201ENST00000385126 88 ntBASIC1.08□□□□□ -2.24
PNKPQ96T60 RNU6-887P-201ENST00000410660 100 ntBASIC1.08□□□□□ -2.24
PNKPQ96T60 RNU6-1110P-201ENST00000516462 101 ntBASIC1.08□□□□□ -2.24
PNKPQ96T60 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
PNKPQ96T60 RNU6-1335P-201ENST00000365426 107 ntBASIC1.07□□□□□ -2.24
PNKPQ96T60 RNU6-49P-201ENST00000384256 107 ntBASIC1.07□□□□□ -2.24
PNKPQ96T60 RNU6-972P-201ENST00000391208 107 ntBASIC1.07□□□□□ -2.24
PNKPQ96T60 U7.7-201ENST00000459276 60 ntBASIC1.07□□□□□ -2.24
PNKPQ96T60 RNU6-1125P-201ENST00000363601 107 ntBASIC1.06□□□□□ -2.24
PNKPQ96T60 Y_RNA.190-201ENST00000363964 101 ntBASIC1.06□□□□□ -2.24
PNKPQ96T60 SNORD114-24-201ENST00000365029 72 ntBASIC1.06□□□□□ -2.24
PNKPQ96T60 RNU6-480P-201ENST00000384332 107 ntBASIC1.06□□□□□ -2.24
PNKPQ96T60 Y_RNA.536-201ENST00000384621 113 ntBASIC1.06□□□□□ -2.24
PNKPQ96T60 RNU6-291P-201ENST00000384720 107 ntBASIC1.06□□□□□ -2.24
PNKPQ96T60 MIR516A2-201ENST00000384888 90 ntBASIC1.06□□□□□ -2.24
PNKPQ96T60 MIR516A1-201ENST00000385033 90 ntBASIC1.06□□□□□ -2.24
PNKPQ96T60 RNU7-106P-201ENST00000459514 67 ntBASIC1.06□□□□□ -2.24
PNKPQ96T60 TRAJ51-201ENST00000504127 63 ntBASIC1.06□□□□□ -2.24
PNKPQ96T60 AL136317.1-201ENST00000612653 226 ntBASIC1.06□□□□□ -2.24
PNKPQ96T60 MIR6788-201ENST00000618842 66 ntBASIC1.06□□□□□ -2.24
PNKPQ96T60 AC025521.1-201ENST00000621624 286 ntBASIC1.06□□□□□ -2.24
PNKPQ96T60 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
PNKPQ96T60 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
PNKPQ96T60 Y_RNA.56-201ENST00000362798 112 ntBASIC1.05□□□□□ -2.24
PNKPQ96T60 Y_RNA.96-201ENST00000363092 109 ntBASIC1.05□□□□□ -2.24
PNKPQ96T60 SNORD58A-201ENST00000383875 65 ntBASIC1.05□□□□□ -2.24
PNKPQ96T60 RNU6-535P-201ENST00000384722 107 ntBASIC1.05□□□□□ -2.24
PNKPQ96T60 MIR635-201ENST00000384830 98 ntBASIC1.05□□□□□ -2.24
PNKPQ96T60 SNORD105-201ENST00000386910 85 ntBASIC1.05□□□□□ -2.24
PNKPQ96T60 SNORD63B-201ENST00000411005 70 ntBASIC1.05□□□□□ -2.24
PNKPQ96T60 RNU6-448P-201ENST00000517052 107 ntBASIC1.05□□□□□ -2.24
PNKPQ96T60 RNU6-1255P-201ENST00000363434 112 ntBASIC1.04□□□□□ -2.24
PNKPQ96T60 RNA5SP245-201ENST00000364239 121 ntBASIC1.04□□□□□ -2.24
PNKPQ96T60 Y_RNA.220-201ENST00000364244 109 ntBASIC1.04□□□□□ -2.24
PNKPQ96T60 AL513043.2-201ENST00000573941 143 ntBASIC1.04□□□□□ -2.24
PNKPQ96T60 MIR548H5-201ENST00000580314 60 ntBASIC1.04□□□□□ -2.24
PNKPQ96T60 Y_RNA.43-201ENST00000362670 111 ntBASIC1.03□□□□□ -2.24
PNKPQ96T60 MIR548J-201ENST00000408833 112 ntBASIC1.03□□□□□ -2.24
PNKPQ96T60 AC092628.1-201ENST00000436250 252 ntBASIC1.03□□□□□ -2.24
PNKPQ96T60 RNA5SP255-201ENST00000516370 107 ntBASIC1.03□□□□□ -2.24
PNKPQ96T60 RNU6-1223P-201ENST00000517124 104 ntBASIC1.03□□□□□ -2.24
PNKPQ96T60 MIR151B-201ENST00000584249 96 ntBASIC1.03□□□□□ -2.24
PNKPQ96T60 AC022709.1-201ENST00000615967 87 ntBASIC1.03□□□□□ -2.24
PNKPQ96T60 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
PNKPQ96T60 RNU6-1187P-201ENST00000364771 110 ntBASIC1.02□□□□□ -2.25
PNKPQ96T60 Y_RNA.369-201ENST00000365568 117 ntBASIC1.02□□□□□ -2.25
PNKPQ96T60 RNU7-195P-201ENST00000458793 62 ntBASIC1.02□□□□□ -2.25
PNKPQ96T60 AP003327.1-201ENST00000529684 127 ntBASIC1.02□□□□□ -2.25
PNKPQ96T60 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.02□□□□□ -2.25
PNKPQ96T60 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.01□□□□□ -2.25
PNKPQ96T60 RNU7-10P-201ENST00000607194 63 ntBASIC1.01□□□□□ -2.25
PNKPQ96T60 MIR373-201ENST00000362273 69 ntBASIC1□□□□□ -2.25
PNKPQ96T60 Y_RNA.32-201ENST00000362589 110 ntBASIC1□□□□□ -2.25
PNKPQ96T60 SNORD36A-201ENST00000362874 73 ntBASIC1□□□□□ -2.25
PNKPQ96T60 SNORD116-10-201ENST00000363791 102 ntBASIC1□□□□□ -2.25
PNKPQ96T60 RNU6-1254P-201ENST00000391266 104 ntBASIC1□□□□□ -2.25
PNKPQ96T60 SNORA31.14-201ENST00000516728 116 ntBASIC1□□□□□ -2.25
PNKPQ96T60 RNU6-844P-201ENST00000517175 102 ntBASIC1□□□□□ -2.25
PNKPQ96T60 AC211469.2-201ENST00000605461 205 ntBASIC1□□□□□ -2.25
PNKPQ96T60 MIR6857-201ENST00000613267 93 ntBASIC1□□□□□ -2.25
PNKPQ96T60 uc_338.16-201ENST00000621804 95 ntBASIC1□□□□□ -2.25
PNKPQ96T60 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1□□□□□ -2.25
PNKPQ96T60 MIR532-201ENST00000385025 91 ntBASIC0.99□□□□□ -2.25
PNKPQ96T60 RNU6-243P-201ENST00000391140 107 ntBASIC0.99□□□□□ -2.25
PNKPQ96T60 AC002350.1-201ENST00000490759 375 ntBASIC0.99□□□□□ -2.25
PNKPQ96T60 AC138907.6-201ENST00000568401 126 ntBASIC0.99□□□□□ -2.25
PNKPQ96T60 AC138869.1-201ENST00000568623 124 ntBASIC0.99□□□□□ -2.25
PNKPQ96T60 AC025627.3-201ENST00000582078 182 ntBASIC0.99□□□□□ -2.25
PNKPQ96T60 MIR6515-201ENST00000619843 57 ntBASIC0.99□□□□□ -2.25
PNKPQ96T60 RNU6-294P-201ENST00000364999 102 ntBASIC0.98□□□□□ -2.25
PNKPQ96T60 SNORD99-201ENST00000408612 74 ntBASIC0.98□□□□□ -2.25
PNKPQ96T60 Y_RNA.809-201ENST00000516058 95 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms