Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SNORD115-44-201ENST00000365391 82 ntBASIC-0.78□□□□□ -2.53
RPRD1AQ96P16 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.78□□□□□ -2.53
RPRD1AQ96P16 MIR34C-201ENST00000384831 77 ntBASIC-0.78□□□□□ -2.53
RPRD1AQ96P16 SNORD58.1-201ENST00000391313 66 ntBASIC-0.78□□□□□ -2.53
RPRD1AQ96P16 AC107027.2-201ENST00000512197 115 ntBASIC-0.78□□□□□ -2.53
RPRD1AQ96P16 MIR4432-201ENST00000581823 84 ntBASIC-0.78□□□□□ -2.53
RPRD1AQ96P16 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.79□□□□□ -2.54
RPRD1AQ96P16 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.79□□□□□ -2.54
RPRD1AQ96P16 MIR516A2-201ENST00000384888 90 ntBASIC-0.79□□□□□ -2.54
RPRD1AQ96P16 MIR516A1-201ENST00000385033 90 ntBASIC-0.79□□□□□ -2.54
RPRD1AQ96P16 RNU6-588P-201ENST00000410281 105 ntBASIC-0.79□□□□□ -2.54
RPRD1AQ96P16 RNY4P20-201ENST00000516678 93 ntBASIC-0.79□□□□□ -2.54
RPRD1AQ96P16 AC087741.2-201ENST00000619415 172 ntBASIC-0.79□□□□□ -2.54
RPRD1AQ96P16 SNORD114-29-201ENST00000364819 70 ntBASIC-0.8□□□□□ -2.54
RPRD1AQ96P16 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.8□□□□□ -2.54
RPRD1AQ96P16 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.8□□□□□ -2.54
RPRD1AQ96P16 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.8□□□□□ -2.54
RPRD1AQ96P16 RNU6-918P-201ENST00000391219 106 ntBASIC-0.8□□□□□ -2.54
RPRD1AQ96P16 MIR2113-201ENST00000459007 91 ntBASIC-0.8□□□□□ -2.54
RPRD1AQ96P16 RNU6-175P-201ENST00000516896 107 ntBASIC-0.8□□□□□ -2.54
RPRD1AQ96P16 MIR4460-201ENST00000577862 86 ntBASIC-0.8□□□□□ -2.54
RPRD1AQ96P16 AL391099.1-201ENST00000624635 187 ntBASIC-0.8□□□□□ -2.54
RPRD1AQ96P16 MIR6844-201ENST00000637122 62 ntBASIC-0.8□□□□□ -2.54
RPRD1AQ96P16 RNU6-309P-201ENST00000364573 106 ntBASIC-0.81□□□□□ -2.54
RPRD1AQ96P16 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.81□□□□□ -2.54
RPRD1AQ96P16 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.81□□□□□ -2.54
RPRD1AQ96P16 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.81□□□□□ -2.54
RPRD1AQ96P16 RNY1P11-201ENST00000363759 113 ntBASIC-0.82□□□□□ -2.54
RPRD1AQ96P16 MIR539-201ENST00000365690 78 ntBASIC-0.82□□□□□ -2.54
RPRD1AQ96P16 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.82□□□□□ -2.54
RPRD1AQ96P16 SNORA51.5-201ENST00000384126 131 ntBASIC-0.82□□□□□ -2.54
RPRD1AQ96P16 MIR224-201ENST00000384889 81 ntBASIC-0.82□□□□□ -2.54
RPRD1AQ96P16 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
RPRD1AQ96P16 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.82□□□□□ -2.54
RPRD1AQ96P16 RNU4-84P-201ENST00000364200 139 ntBASIC-0.83□□□□□ -2.54
RPRD1AQ96P16 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.83□□□□□ -2.54
RPRD1AQ96P16 RNU6-154P-201ENST00000384306 106 ntBASIC-0.83□□□□□ -2.54
RPRD1AQ96P16 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.83□□□□□ -2.54
RPRD1AQ96P16 MIR4436A-201ENST00000585278 85 ntBASIC-0.83□□□□□ -2.54
RPRD1AQ96P16 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.84□□□□□ -2.54
RPRD1AQ96P16 SNORD18B-201ENST00000365659 72 ntBASIC-0.84□□□□□ -2.54
RPRD1AQ96P16 RNU6-287P-201ENST00000516230 98 ntBASIC-0.84□□□□□ -2.54
RPRD1AQ96P16 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.84□□□□□ -2.54
RPRD1AQ96P16 AL117187.1-201ENST00000555482 181 ntBASIC-0.84□□□□□ -2.54
RPRD1AQ96P16 MIR3646-201ENST00000578301 84 ntBASIC-0.84□□□□□ -2.54
RPRD1AQ96P16 AC108081.1-201ENST00000604358 221 ntBASIC-0.84□□□□□ -2.54
RPRD1AQ96P16 AL137067.1-201ENST00000615933 120 ntBASIC-0.84□□□□□ -2.54
RPRD1AQ96P16 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.85□□□□□ -2.55
RPRD1AQ96P16 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.85□□□□□ -2.55
RPRD1AQ96P16 RNU6-455P-201ENST00000384681 107 ntBASIC-0.85□□□□□ -2.55
RPRD1AQ96P16 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.85□□□□□ -2.55
RPRD1AQ96P16 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.85□□□□□ -2.55
RPRD1AQ96P16 AC096720.1-201ENST00000604441 183 ntBASIC-0.85□□□□□ -2.55
RPRD1AQ96P16 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.85□□□□□ -2.55
RPRD1AQ96P16 RNU6-797P-201ENST00000363101 109 ntBASIC-0.86□□□□□ -2.55
RPRD1AQ96P16 RNU6-312P-201ENST00000364629 107 ntBASIC-0.86□□□□□ -2.55
RPRD1AQ96P16 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.86□□□□□ -2.55
RPRD1AQ96P16 MT-TY-201ENST00000387409 66 ntBASIC-0.86□□□□□ -2.55
RPRD1AQ96P16 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.86□□□□□ -2.55
RPRD1AQ96P16 AP001094.1-201ENST00000579805 193 ntBASIC-0.86□□□□□ -2.55
RPRD1AQ96P16 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.87□□□□□ -2.55
RPRD1AQ96P16 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.87□□□□□ -2.55
RPRD1AQ96P16 HAR1A.1-201ENST00000459583 118 ntBASIC-0.87□□□□□ -2.55
RPRD1AQ96P16 RNU6-521P-201ENST00000516663 105 ntBASIC-0.87□□□□□ -2.55
RPRD1AQ96P16 RNA5SP66-201ENST00000517178 101 ntBASIC-0.87□□□□□ -2.55
RPRD1AQ96P16 TRDV1-202ENST00000621643 102 ntBASIC-0.87□□□□□ -2.55
RPRD1AQ96P16 SNORD114-15-201ENST00000364687 72 ntBASIC-0.88□□□□□ -2.55
RPRD1AQ96P16 RNY4P3-201ENST00000365254 95 ntBASIC-0.88□□□□□ -2.55
RPRD1AQ96P16 RNU6-47P-201ENST00000383866 107 ntBASIC-0.88□□□□□ -2.55
RPRD1AQ96P16 RNU6-735P-201ENST00000410612 107 ntBASIC-0.88□□□□□ -2.55
RPRD1AQ96P16 AL161932.1-201ENST00000437408 146 ntBASIC-0.88□□□□□ -2.55
RPRD1AQ96P16 RNU4-71P-201ENST00000516258 113 ntBASIC-0.88□□□□□ -2.55
RPRD1AQ96P16 RNU7-6P-201ENST00000516845 62 ntBASIC-0.88□□□□□ -2.55
RPRD1AQ96P16 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.88□□□□□ -2.55
RPRD1AQ96P16 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.88□□□□□ -2.55
RPRD1AQ96P16 MIR3658-201ENST00000636291 56 ntBASIC-0.88□□□□□ -2.55
RPRD1AQ96P16 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.89□□□□□ -2.55
RPRD1AQ96P16 SNORD38.2-201ENST00000384470 69 ntBASIC-0.89□□□□□ -2.55
RPRD1AQ96P16 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.89□□□□□ -2.55
RPRD1AQ96P16 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.89□□□□□ -2.55
RPRD1AQ96P16 RNA5SP169-201ENST00000517268 117 ntBASIC-0.89□□□□□ -2.55
RPRD1AQ96P16 U6.100-201ENST00000636230 99 ntBASIC-0.89□□□□□ -2.55
RPRD1AQ96P16 SNORD115-19-201ENST00000363098 82 ntBASIC-0.9□□□□□ -2.55
RPRD1AQ96P16 SNORD115-18-201ENST00000363293 82 ntBASIC-0.9□□□□□ -2.55
RPRD1AQ96P16 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.9□□□□□ -2.55
RPRD1AQ96P16 SNORD115-17-201ENST00000364612 82 ntBASIC-0.9□□□□□ -2.55
RPRD1AQ96P16 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.9□□□□□ -2.55
RPRD1AQ96P16 MIR9-2-201ENST00000384838 87 ntBASIC-0.9□□□□□ -2.55
RPRD1AQ96P16 MIR3681-201ENST00000580089 72 ntBASIC-0.9□□□□□ -2.55
RPRD1AQ96P16 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.91□□□□□ -2.56
RPRD1AQ96P16 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.91□□□□□ -2.56
RPRD1AQ96P16 MT-TI-201ENST00000387365 69 ntBASIC-0.91□□□□□ -2.56
RPRD1AQ96P16 MT-TQ-201ENST00000387372 72 ntBASIC-0.91□□□□□ -2.56
RPRD1AQ96P16 SNORD37.2-201ENST00000391075 66 ntBASIC-0.91□□□□□ -2.56
RPRD1AQ96P16 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.91□□□□□ -2.56
RPRD1AQ96P16 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.91□□□□□ -2.56
RPRD1AQ96P16 SNORD36A-201ENST00000362874 73 ntBASIC-0.92□□□□□ -2.56
RPRD1AQ96P16 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.92□□□□□ -2.56
RPRD1AQ96P16 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.92□□□□□ -2.56
RPRD1AQ96P16 RNU6-239P-201ENST00000390990 99 ntBASIC-0.92□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms