Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 SNORD56.2-201ENST00000363242 71 ntBASIC-3.07□□□□□ -2.9
CFAP54Q96N23 RNU5B-1-201ENST00000363286 116 ntBASIC-3.07□□□□□ -2.9
CFAP54Q96N23 Y_RNA.556-201ENST00000384677 113 ntBASIC-3.07□□□□□ -2.9
CFAP54Q96N23 MIR548C-201ENST00000384815 97 ntBASIC-3.07□□□□□ -2.9
CFAP54Q96N23 RNU6-625P-201ENST00000459412 107 ntBASIC-3.07□□□□□ -2.9
CFAP54Q96N23 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-3.07□□□□□ -2.9
CFAP54Q96N23 MIR3140-201ENST00000583685 90 ntBASIC-3.07□□□□□ -2.9
CFAP54Q96N23 AL133173.2-201ENST00000614270 90 ntBASIC-3.07□□□□□ -2.9
CFAP54Q96N23 RNU6-598P-201ENST00000364017 105 ntBASIC-3.08□□□□□ -2.9
CFAP54Q96N23 RNU6-669P-201ENST00000365575 107 ntBASIC-3.08□□□□□ -2.9
CFAP54Q96N23 MTCO2P30-201ENST00000503662 364 ntBASIC-3.08□□□□□ -2.9
CFAP54Q96N23 SCARNA24.1-201ENST00000516465 137 ntBASIC-3.08□□□□□ -2.9
CFAP54Q96N23 RNU6-822P-201ENST00000362707 106 ntBASIC-3.08□□□□□ -2.9
CFAP54Q96N23 SNORA72.4-201ENST00000384174 132 ntBASIC-3.08□□□□□ -2.9
CFAP54Q96N23 U2.7-201ENST00000619197 100 ntBASIC-3.08□□□□□ -2.9
CFAP54Q96N23 MTND4LP7-201ENST00000431728 294 ntBASIC-3.08□□□□□ -2.9
CFAP54Q96N23 MIR4790-201ENST00000577799 79 ntBASIC-3.08□□□□□ -2.9
CFAP54Q96N23 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.09□□□□□ -2.9
CFAP54Q96N23 RNU6-281P-201ENST00000384212 103 ntBASIC-3.09□□□□□ -2.9
CFAP54Q96N23 RNU6-606P-201ENST00000384721 111 ntBASIC-3.09□□□□□ -2.9
CFAP54Q96N23 SNORD90-201ENST00000391145 111 ntBASIC-3.09□□□□□ -2.9
CFAP54Q96N23 SNORD115-47-201ENST00000391226 86 ntBASIC-3.09□□□□□ -2.9
CFAP54Q96N23 RNU7-151P-201ENST00000516930 53 ntBASIC-3.09□□□□□ -2.9
CFAP54Q96N23 AC009779.6-201ENST00000603972 165 ntBASIC-3.09□□□□□ -2.9
CFAP54Q96N23 RNU6-867P-201ENST00000364956 107 ntBASIC-3.09□□□□□ -2.9
CFAP54Q96N23 Y_RNA.618-201ENST00000410949 107 ntBASIC-3.09□□□□□ -2.9
CFAP54Q96N23 MTRNR2L9-201ENST00000622562 75 ntBASIC-3.09□□□□□ -2.9
CFAP54Q96N23 SNORD116-11-201ENST00000383882 92 ntBASIC-3.1□□□□□ -2.91
CFAP54Q96N23 SNORD77.4-201ENST00000516158 81 ntBASIC-3.1□□□□□ -2.91
CFAP54Q96N23 RNU2-4P-201ENST00000606190 192 ntBASIC-3.1□□□□□ -2.91
CFAP54Q96N23 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.1□□□□□ -2.91
CFAP54Q96N23 MTCO2P29-201ENST00000465212 189 ntBASIC-3.11□□□□□ -2.91
CFAP54Q96N23 RNU2-69P-201ENST00000516061 100 ntBASIC-3.11□□□□□ -2.91
CFAP54Q96N23 Y_RNA.304-201ENST00000365011 112 ntBASIC-3.11□□□□□ -2.91
CFAP54Q96N23 RNU6-1307P-201ENST00000391012 103 ntBASIC-3.11□□□□□ -2.91
CFAP54Q96N23 MTND3P1-201ENST00000441336 220 ntBASIC-3.11□□□□□ -2.91
CFAP54Q96N23 AL691482.2-201ENST00000457453 84 ntBASIC-3.11□□□□□ -2.91
CFAP54Q96N23 RNU6-129P-201ENST00000391022 107 ntBASIC-3.11□□□□□ -2.91
CFAP54Q96N23 RNA5SP449-201ENST00000516871 130 ntBASIC-3.11□□□□□ -2.91
CFAP54Q96N23 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-3.11□□□□□ -2.91
CFAP54Q96N23 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.12□□□□□ -2.91
CFAP54Q96N23 Y_RNA.192-201ENST00000363977 102 ntBASIC-3.12□□□□□ -2.91
CFAP54Q96N23 RNU6-361P-201ENST00000364454 107 ntBASIC-3.12□□□□□ -2.91
CFAP54Q96N23 MIR1-2-201ENST00000384961 85 ntBASIC-3.12□□□□□ -2.91
CFAP54Q96N23 MIR34C-201ENST00000384831 77 ntBASIC-3.12□□□□□ -2.91
CFAP54Q96N23 AC138393.2-201ENST00000414742 246 ntBASIC-3.12□□□□□ -2.91
CFAP54Q96N23 SNORD1B-201ENST00000363091 84 ntBASIC-3.13□□□□□ -2.91
CFAP54Q96N23 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.13□□□□□ -2.91
CFAP54Q96N23 RNU6-481P-201ENST00000384194 107 ntBASIC-3.13□□□□□ -2.91
CFAP54Q96N23 MIR548U-201ENST00000390728 81 ntBASIC-3.13□□□□□ -2.91
CFAP54Q96N23 MTND3P2-201ENST00000438452 342 ntBASIC-3.13□□□□□ -2.91
CFAP54Q96N23 RNU6-656P-201ENST00000516785 107 ntBASIC-3.13□□□□□ -2.91
CFAP54Q96N23 Y_RNA.474-201ENST00000384341 102 ntBASIC-3.13□□□□□ -2.91
CFAP54Q96N23 SNORD12B-201ENST00000410433 91 ntBASIC-3.13□□□□□ -2.91
CFAP54Q96N23 AC098826.2-201ENST00000452011 651 ntBASIC-3.13□□□□□ -2.91
CFAP54Q96N23 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-3.13□□□□□ -2.91
CFAP54Q96N23 RNU6-769P-201ENST00000384407 104 ntBASIC-3.13□□□□□ -2.91
CFAP54Q96N23 RNU6-445P-201ENST00000516949 107 ntBASIC-3.13□□□□□ -2.91
CFAP54Q96N23 MIR3118-1-201ENST00000581787 76 ntBASIC-3.13□□□□□ -2.91
CFAP54Q96N23 AC092794.2-201ENST00000620933 563 ntBASIC-3.13□□□□□ -2.91
CFAP54Q96N23 AC099654.14-201ENST00000638599 341 ntBASIC-3.13□□□□□ -2.91
CFAP54Q96N23 U6.106-201ENST00000636360 105 ntBASIC-3.14□□□□□ -2.91
CFAP54Q96N23 Y_RNA.101-201ENST00000363154 102 ntBASIC-3.14□□□□□ -2.91
CFAP54Q96N23 Y_RNA.584-201ENST00000391090 114 ntBASIC-3.14□□□□□ -2.91
CFAP54Q96N23 RNU2-55P-201ENST00000411146 174 ntBASIC-3.14□□□□□ -2.91
CFAP54Q96N23 RNU6-470P-201ENST00000515954 104 ntBASIC-3.14□□□□□ -2.91
CFAP54Q96N23 RNU6-974P-201ENST00000384099 108 ntBASIC-3.15□□□□□ -2.91
CFAP54Q96N23 AP001506.1-201ENST00000615444 211 ntBASIC-3.15□□□□□ -2.91
CFAP54Q96N23 MTND5P26-201ENST00000426018 1752 ntBASIC-3.15□□□□□ -2.91
CFAP54Q96N23 U4.4-201ENST00000620626 117 ntBASIC-3.15□□□□□ -2.91
CFAP54Q96N23 RNU6-1225P-201ENST00000516336 65 ntBASIC-3.16□□□□□ -2.91
CFAP54Q96N23 RNU6-698P-201ENST00000363523 107 ntBASIC-3.16□□□□□ -2.92
CFAP54Q96N23 RNU6-34P-201ENST00000364874 107 ntBASIC-3.16□□□□□ -2.92
CFAP54Q96N23 RNU6-157P-201ENST00000383957 107 ntBASIC-3.16□□□□□ -2.92
CFAP54Q96N23 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-3.16□□□□□ -2.92
CFAP54Q96N23 Y_RNA.706-201ENST00000516933 99 ntBASIC-3.16□□□□□ -2.92
CFAP54Q96N23 RNU6-570P-201ENST00000517051 105 ntBASIC-3.16□□□□□ -2.92
CFAP54Q96N23 SNORD50.1-201ENST00000362987 71 ntBASIC-3.17□□□□□ -2.92
CFAP54Q96N23 AF228730.3-201ENST00000436691 102 ntBASIC-3.17□□□□□ -2.92
CFAP54Q96N23 AC073869.6-201ENST00000640656 341 ntBASIC-3.17□□□□□ -2.92
CFAP54Q96N23 RNU7-167P-201ENST00000459160 62 ntBASIC-3.18□□□□□ -2.92
CFAP54Q96N23 RNU2-35P-201ENST00000516446 142 ntBASIC-3.18□□□□□ -2.92
CFAP54Q96N23 MIR4789-201ENST00000577469 82 ntBASIC-3.18□□□□□ -2.92
CFAP54Q96N23 AC016252.1-201ENST00000609721 474 ntBASIC-3.18□□□□□ -2.92
CFAP54Q96N23 RNU6-238P-201ENST00000363313 106 ntBASIC-3.18□□□□□ -2.92
CFAP54Q96N23 RNU6-1329P-201ENST00000365664 107 ntBASIC-3.18□□□□□ -2.92
CFAP54Q96N23 AC024067.1-201ENST00000426199 223 ntBASIC-3.18□□□□□ -2.92
CFAP54Q96N23 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-3.18□□□□□ -2.92
CFAP54Q96N23 RNU4-85P-201ENST00000364675 123 ntBASIC-3.18□□□□□ -2.92
CFAP54Q96N23 MRPS35P2-201ENST00000508242 191 ntBASIC-3.18□□□□□ -2.92
CFAP54Q96N23 RNU6-888P-201ENST00000363010 101 ntBASIC-3.19□□□□□ -2.92
CFAP54Q96N23 SNORA17.4-201ENST00000391287 132 ntBASIC-3.19□□□□□ -2.92
CFAP54Q96N23 IGHVII-40-1-201ENST00000517316 58 ntBASIC-3.19□□□□□ -2.92
CFAP54Q96N23 RNU6-1051P-201ENST00000365471 102 ntBASIC-3.2□□□□□ -2.92
CFAP54Q96N23 MIR122-201ENST00000385044 85 ntBASIC-3.2□□□□□ -2.92
CFAP54Q96N23 MIR548I1-201ENST00000408810 149 ntBASIC-3.2□□□□□ -2.92
CFAP54Q96N23 Y_RNA.649-201ENST00000459077 103 ntBASIC-3.2□□□□□ -2.92
CFAP54Q96N23 MIR548G-201ENST00000408442 89 ntBASIC-3.2□□□□□ -2.92
CFAP54Q96N23 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-3.2□□□□□ -2.92
CFAP54Q96N23 MTND3P12-201ENST00000559068 328 ntBASIC-3.2□□□□□ -2.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms