Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 Y_RNA.697-201ENST00000516776 113 ntBASIC2.5□□□□□ -2.01
TRIM47Q96LD4 AC080100.1-201ENST00000624239 5356 ntBASIC2.49□□□□□ -2.01
TRIM47Q96LD4 RNU6-1123P-201ENST00000362347 106 ntBASIC2.49□□□□□ -2.01
TRIM47Q96LD4 Y_RNA.56-201ENST00000362798 112 ntBASIC2.49□□□□□ -2.01
TRIM47Q96LD4 RNU1-36P-201ENST00000365130 165 ntBASIC2.49□□□□□ -2.01
TRIM47Q96LD4 AC097635.1-201ENST00000450678 155 ntBASIC2.49□□□□□ -2.01
TRIM47Q96LD4 RPL30P7-201ENST00000479312 323 ntBASIC2.49□□□□□ -2.01
TRIM47Q96LD4 MIR3192-201ENST00000584920 77 ntBASIC2.49□□□□□ -2.01
TRIM47Q96LD4 AL078603.1-201ENST00000603824 313 ntBASIC2.49□□□□□ -2.01
TRIM47Q96LD4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TRIM47Q96LD4 MIR583-201ENST00000384846 75 ntBASIC2.48□□□□□ -2.01
TRIM47Q96LD4 RNA5SP465-201ENST00000391195 109 ntBASIC2.48□□□□□ -2.01
TRIM47Q96LD4 RNU6-122P-201ENST00000516818 107 ntBASIC2.48□□□□□ -2.01
TRIM47Q96LD4 AC015688.6-201ENST00000577737 104 ntBASIC2.48□□□□□ -2.01
TRIM47Q96LD4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
TRIM47Q96LD4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TRIM47Q96LD4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.47□□□□□ -2.01
TRIM47Q96LD4 RNU1-148P-201ENST00000384472 162 ntBASIC2.47□□□□□ -2.01
TRIM47Q96LD4 MT-TN-201ENST00000387400 73 ntBASIC2.47□□□□□ -2.01
TRIM47Q96LD4 RNA5SP299-201ENST00000391203 116 ntBASIC2.47□□□□□ -2.01
TRIM47Q96LD4 RNA5SP501-201ENST00000410990 112 ntBASIC2.47□□□□□ -2.01
TRIM47Q96LD4 MIR2115-201ENST00000516657 100 ntBASIC2.47□□□□□ -2.01
TRIM47Q96LD4 MIR514B-201ENST00000516774 80 ntBASIC2.47□□□□□ -2.01
TRIM47Q96LD4 SNORA3A-201ENST00000364113 130 ntBASIC2.46□□□□□ -2.02
TRIM47Q96LD4 Y_RNA.379-201ENST00000365653 102 ntBASIC2.46□□□□□ -2.02
TRIM47Q96LD4 MIR144-201ENST00000384886 86 ntBASIC2.46□□□□□ -2.02
TRIM47Q96LD4 AC108667.1-201ENST00000428618 249 ntBASIC2.46□□□□□ -2.02
TRIM47Q96LD4 RNU6-1265P-201ENST00000516342 103 ntBASIC2.46□□□□□ -2.02
TRIM47Q96LD4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TRIM47Q96LD4 ZNF355P-201ENST00000427301 3216 ntBASIC2.46□□□□□ -2.02
TRIM47Q96LD4 RNU6-1312P-201ENST00000362425 108 ntBASIC2.45□□□□□ -2.02
TRIM47Q96LD4 MIR599-201ENST00000385069 95 ntBASIC2.45□□□□□ -2.02
TRIM47Q96LD4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
TRIM47Q96LD4 SNORA17.3-201ENST00000391159 129 ntBASIC2.45□□□□□ -2.02
TRIM47Q96LD4 U3.27-201ENST00000391237 200 ntBASIC2.45□□□□□ -2.02
TRIM47Q96LD4 AC104435.1-201ENST00000483483 166 ntBASIC2.45□□□□□ -2.02
TRIM47Q96LD4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.45□□□□□ -2.02
TRIM47Q96LD4 AC103810.8-201ENST00000607347 118 ntBASIC2.45□□□□□ -2.02
TRIM47Q96LD4 AC073869.9-201ENST00000641610 120 ntBASIC2.45□□□□□ -2.02
TRIM47Q96LD4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TRIM47Q96LD4 RNU6-203P-201ENST00000384038 104 ntBASIC2.44□□□□□ -2.02
TRIM47Q96LD4 MIR518A2-201ENST00000384966 87 ntBASIC2.44□□□□□ -2.02
TRIM47Q96LD4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.44□□□□□ -2.02
TRIM47Q96LD4 SNORD75.2-201ENST00000408784 58 ntBASIC2.44□□□□□ -2.02
TRIM47Q96LD4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
TRIM47Q96LD4 RNU6-645P-201ENST00000364649 106 ntBASIC2.43□□□□□ -2.02
TRIM47Q96LD4 RNU6-1039P-201ENST00000383931 107 ntBASIC2.43□□□□□ -2.02
TRIM47Q96LD4 SNORD41-201ENST00000386967 70 ntBASIC2.43□□□□□ -2.02
TRIM47Q96LD4 RN7SL274P-201ENST00000492268 272 ntBASIC2.43□□□□□ -2.02
TRIM47Q96LD4 snoU13.31-201ENST00000607291 104 ntBASIC2.43□□□□□ -2.02
TRIM47Q96LD4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
TRIM47Q96LD4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TRIM47Q96LD4 Y_RNA.13-201ENST00000362403 112 ntBASIC2.42□□□□□ -2.02
TRIM47Q96LD4 Y_RNA.118-201ENST00000363300 101 ntBASIC2.42□□□□□ -2.02
TRIM47Q96LD4 MIR203A-201ENST00000384836 110 ntBASIC2.42□□□□□ -2.02
TRIM47Q96LD4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.42□□□□□ -2.02
TRIM47Q96LD4 RNA5SP182-201ENST00000516064 82 ntBASIC2.42□□□□□ -2.02
TRIM47Q96LD4 MIR6895-201ENST00000613497 78 ntBASIC2.42□□□□□ -2.02
TRIM47Q96LD4 MIR6082-201ENST00000613604 109 ntBASIC2.42□□□□□ -2.02
TRIM47Q96LD4 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.42□□□□□ -2.02
TRIM47Q96LD4 MIR6509-201ENST00000614603 85 ntBASIC2.42□□□□□ -2.02
TRIM47Q96LD4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
TRIM47Q96LD4 SNORA75.1-201ENST00000391130 148 ntBASIC2.41□□□□□ -2.02
TRIM47Q96LD4 MIR18B-201ENST00000454574 71 ntBASIC2.41□□□□□ -2.02
TRIM47Q96LD4 RNU6-92P-201ENST00000605893 104 ntBASIC2.41□□□□□ -2.02
TRIM47Q96LD4 MIR6516-201ENST00000630554 81 ntBASIC2.41□□□□□ -2.02
TRIM47Q96LD4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
TRIM47Q96LD4 MIR377-201ENST00000362145 69 ntBASIC2.4□□□□□ -2.03
TRIM47Q96LD4 SNORA48.3-201ENST00000391081 134 ntBASIC2.4□□□□□ -2.03
TRIM47Q96LD4 RNA5SP270-201ENST00000411361 118 ntBASIC2.4□□□□□ -2.03
TRIM47Q96LD4 AC004965.1-201ENST00000413033 213 ntBASIC2.4□□□□□ -2.03
TRIM47Q96LD4 RNU7-193P-201ENST00000516723 65 ntBASIC2.4□□□□□ -2.03
TRIM47Q96LD4 RNU6-922P-201ENST00000516753 99 ntBASIC2.4□□□□□ -2.03
TRIM47Q96LD4 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.4□□□□□ -2.03
TRIM47Q96LD4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
TRIM47Q96LD4 RNU6-753P-201ENST00000363926 107 ntBASIC2.39□□□□□ -2.03
TRIM47Q96LD4 SNORD23.1-201ENST00000408212 104 ntBASIC2.39□□□□□ -2.03
TRIM47Q96LD4 RNA5SP95-201ENST00000410319 137 ntBASIC2.39□□□□□ -2.03
TRIM47Q96LD4 RNU6-287P-201ENST00000516230 98 ntBASIC2.39□□□□□ -2.03
TRIM47Q96LD4 AC138907.6-201ENST00000568401 126 ntBASIC2.39□□□□□ -2.03
TRIM47Q96LD4 AC138869.1-201ENST00000568623 124 ntBASIC2.39□□□□□ -2.03
TRIM47Q96LD4 NAMPTP3-201ENST00000569273 224 ntBASIC2.39□□□□□ -2.03
TRIM47Q96LD4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
TRIM47Q96LD4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
TRIM47Q96LD4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRIM47Q96LD4 MIR378A-201ENST00000362177 66 ntBASIC2.38□□□□□ -2.03
TRIM47Q96LD4 SNORD60.1-201ENST00000362451 73 ntBASIC2.38□□□□□ -2.03
TRIM47Q96LD4 MIR194-1-201ENST00000384892 85 ntBASIC2.38□□□□□ -2.03
TRIM47Q96LD4 RNU6-360P-201ENST00000390944 104 ntBASIC2.38□□□□□ -2.03
TRIM47Q96LD4 RNU7-24P-201ENST00000458867 62 ntBASIC2.38□□□□□ -2.03
TRIM47Q96LD4 SNORA31.17-201ENST00000516953 127 ntBASIC2.38□□□□□ -2.03
TRIM47Q96LD4 MIR5694-201ENST00000581190 76 ntBASIC2.38□□□□□ -2.03
TRIM47Q96LD4 Y_RNA.783-201ENST00000613546 102 ntBASIC2.38□□□□□ -2.03
TRIM47Q96LD4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.38□□□□□ -2.03
TRIM47Q96LD4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRIM47Q96LD4 RNA5SP215-201ENST00000363440 122 ntBASIC2.37□□□□□ -2.03
TRIM47Q96LD4 RNA5SP259-201ENST00000365541 109 ntBASIC2.37□□□□□ -2.03
TRIM47Q96LD4 RNA5SP100-201ENST00000410903 110 ntBASIC2.37□□□□□ -2.03
TRIM47Q96LD4 RNA5SP59-201ENST00000410922 110 ntBASIC2.37□□□□□ -2.03
TRIM47Q96LD4 snoU13.25-201ENST00000458945 104 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 229.6 ms