Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AL590491.3-201ENST00000610731 82 ntBASIC-0.67□□□□□ -2.52
PKNOX2Q96KN3 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.68□□□□□ -2.52
PKNOX2Q96KN3 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.68□□□□□ -2.52
PKNOX2Q96KN3 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.68□□□□□ -2.52
PKNOX2Q96KN3 AC107027.2-201ENST00000512197 115 ntBASIC-0.68□□□□□ -2.52
PKNOX2Q96KN3 RNU6-850P-201ENST00000516934 103 ntBASIC-0.68□□□□□ -2.52
PKNOX2Q96KN3 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.69□□□□□ -2.52
PKNOX2Q96KN3 SNORD114-29-201ENST00000364819 70 ntBASIC-0.69□□□□□ -2.52
PKNOX2Q96KN3 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.69□□□□□ -2.52
PKNOX2Q96KN3 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.69□□□□□ -2.52
PKNOX2Q96KN3 snoU13.19-201ENST00000459148 104 ntBASIC-0.69□□□□□ -2.52
PKNOX2Q96KN3 AC096720.1-201ENST00000604441 183 ntBASIC-0.69□□□□□ -2.52
PKNOX2Q96KN3 MIR6844-201ENST00000637122 62 ntBASIC-0.69□□□□□ -2.52
PKNOX2Q96KN3 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.7□□□□□ -2.52
PKNOX2Q96KN3 SNORD27-201ENST00000363981 72 ntBASIC-0.7□□□□□ -2.52
PKNOX2Q96KN3 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.7□□□□□ -2.52
PKNOX2Q96KN3 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.7□□□□□ -2.52
PKNOX2Q96KN3 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.7□□□□□ -2.52
PKNOX2Q96KN3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.7□□□□□ -2.52
PKNOX2Q96KN3 RNU6-735P-201ENST00000410612 107 ntBASIC-0.7□□□□□ -2.52
PKNOX2Q96KN3 AC074198.2-201ENST00000508153 258 ntBASIC-0.7□□□□□ -2.52
PKNOX2Q96KN3 MIR3646-201ENST00000578301 84 ntBASIC-0.7□□□□□ -2.52
PKNOX2Q96KN3 AP001094.1-201ENST00000579805 193 ntBASIC-0.7□□□□□ -2.52
PKNOX2Q96KN3 MIR4432-201ENST00000581823 84 ntBASIC-0.7□□□□□ -2.52
PKNOX2Q96KN3 SNORD18B-201ENST00000365659 72 ntBASIC-0.71□□□□□ -2.52
PKNOX2Q96KN3 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.71□□□□□ -2.52
PKNOX2Q96KN3 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.71□□□□□ -2.52
PKNOX2Q96KN3 RNU6-918P-201ENST00000391219 106 ntBASIC-0.71□□□□□ -2.52
PKNOX2Q96KN3 RNU6-588P-201ENST00000410281 105 ntBASIC-0.71□□□□□ -2.52
PKNOX2Q96KN3 HAR1A.1-201ENST00000459583 118 ntBASIC-0.71□□□□□ -2.52
PKNOX2Q96KN3 RNY4P20-201ENST00000516678 93 ntBASIC-0.71□□□□□ -2.52
PKNOX2Q96KN3 MIR4460-201ENST00000577862 86 ntBASIC-0.71□□□□□ -2.52
PKNOX2Q96KN3 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.71□□□□□ -2.52
PKNOX2Q96KN3 AC087741.2-201ENST00000619415 172 ntBASIC-0.71□□□□□ -2.52
PKNOX2Q96KN3 AL391099.1-201ENST00000624635 187 ntBASIC-0.71□□□□□ -2.52
PKNOX2Q96KN3 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.72□□□□□ -2.52
PKNOX2Q96KN3 RNU4-84P-201ENST00000364200 139 ntBASIC-0.72□□□□□ -2.52
PKNOX2Q96KN3 RNU6-312P-201ENST00000364629 107 ntBASIC-0.72□□□□□ -2.52
PKNOX2Q96KN3 MIR34C-201ENST00000384831 77 ntBASIC-0.72□□□□□ -2.52
PKNOX2Q96KN3 MIR516A2-201ENST00000384888 90 ntBASIC-0.72□□□□□ -2.52
PKNOX2Q96KN3 MIR516A1-201ENST00000385033 90 ntBASIC-0.72□□□□□ -2.52
PKNOX2Q96KN3 MIR2113-201ENST00000459007 91 ntBASIC-0.72□□□□□ -2.52
PKNOX2Q96KN3 RNU6-508P-201ENST00000363231 103 ntBASIC-0.73□□□□□ -2.53
PKNOX2Q96KN3 MIR548AE1-201ENST00000583292 70 ntBASIC-0.73□□□□□ -2.53
PKNOX2Q96KN3 AL137067.1-201ENST00000615933 120 ntBASIC-0.73□□□□□ -2.53
PKNOX2Q96KN3 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.74□□□□□ -2.53
PKNOX2Q96KN3 RNU6-797P-201ENST00000363101 109 ntBASIC-0.74□□□□□ -2.53
PKNOX2Q96KN3 RNU6-309P-201ENST00000364573 106 ntBASIC-0.74□□□□□ -2.53
PKNOX2Q96KN3 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.74□□□□□ -2.53
PKNOX2Q96KN3 RNU6-138P-201ENST00000515952 107 ntBASIC-0.74□□□□□ -2.53
PKNOX2Q96KN3 RNU6-175P-201ENST00000516896 107 ntBASIC-0.74□□□□□ -2.53
PKNOX2Q96KN3 AL117187.1-201ENST00000555482 181 ntBASIC-0.74□□□□□ -2.53
PKNOX2Q96KN3 MIR548AX-201ENST00000580117 73 ntBASIC-0.74□□□□□ -2.53
PKNOX2Q96KN3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.75□□□□□ -2.53
PKNOX2Q96KN3 MIR539-201ENST00000365690 78 ntBASIC-0.75□□□□□ -2.53
PKNOX2Q96KN3 SNORA51.5-201ENST00000384126 131 ntBASIC-0.75□□□□□ -2.53
PKNOX2Q96KN3 RNU6-154P-201ENST00000384306 106 ntBASIC-0.75□□□□□ -2.53
PKNOX2Q96KN3 SNORD38.2-201ENST00000384470 69 ntBASIC-0.75□□□□□ -2.53
PKNOX2Q96KN3 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.75□□□□□ -2.53
PKNOX2Q96KN3 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
PKNOX2Q96KN3 RNU6-287P-201ENST00000516230 98 ntBASIC-0.75□□□□□ -2.53
PKNOX2Q96KN3 RNU4-71P-201ENST00000516258 113 ntBASIC-0.75□□□□□ -2.53
PKNOX2Q96KN3 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.75□□□□□ -2.53
PKNOX2Q96KN3 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.75□□□□□ -2.53
PKNOX2Q96KN3 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.75□□□□□ -2.53
PKNOX2Q96KN3 IGKV1-22-201ENST00000524313 326 ntBASIC-0.75□□□□□ -2.53
PKNOX2Q96KN3 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.76□□□□□ -2.53
PKNOX2Q96KN3 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.76□□□□□ -2.53
PKNOX2Q96KN3 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.76□□□□□ -2.53
PKNOX2Q96KN3 MT-TY-201ENST00000387409 66 ntBASIC-0.76□□□□□ -2.53
PKNOX2Q96KN3 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.76□□□□□ -2.53
PKNOX2Q96KN3 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.76□□□□□ -2.53
PKNOX2Q96KN3 MIR4436A-201ENST00000585278 85 ntBASIC-0.76□□□□□ -2.53
PKNOX2Q96KN3 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.77□□□□□ -2.53
PKNOX2Q96KN3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.77□□□□□ -2.53
PKNOX2Q96KN3 RNA5SP66-201ENST00000517178 101 ntBASIC-0.77□□□□□ -2.53
PKNOX2Q96KN3 RNU6-455P-201ENST00000384681 107 ntBASIC-0.78□□□□□ -2.53
PKNOX2Q96KN3 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.78□□□□□ -2.53
PKNOX2Q96KN3 RNU6-521P-201ENST00000516663 105 ntBASIC-0.78□□□□□ -2.53
PKNOX2Q96KN3 RNU7-6P-201ENST00000516845 62 ntBASIC-0.78□□□□□ -2.53
PKNOX2Q96KN3 SNORD114-14-201ENST00000362723 75 ntBASIC-0.79□□□□□ -2.54
PKNOX2Q96KN3 SNORD115-19-201ENST00000363098 82 ntBASIC-0.79□□□□□ -2.54
PKNOX2Q96KN3 SNORD115-18-201ENST00000363293 82 ntBASIC-0.79□□□□□ -2.54
PKNOX2Q96KN3 RNY1P11-201ENST00000363759 113 ntBASIC-0.79□□□□□ -2.54
PKNOX2Q96KN3 SNORD115-17-201ENST00000364612 82 ntBASIC-0.79□□□□□ -2.54
PKNOX2Q96KN3 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.79□□□□□ -2.54
PKNOX2Q96KN3 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.79□□□□□ -2.54
PKNOX2Q96KN3 MIR3681-201ENST00000580089 72 ntBASIC-0.79□□□□□ -2.54
PKNOX2Q96KN3 AC108081.1-201ENST00000604358 221 ntBASIC-0.79□□□□□ -2.54
PKNOX2Q96KN3 TRDV1-202ENST00000621643 102 ntBASIC-0.79□□□□□ -2.54
PKNOX2Q96KN3 MIR20A-201ENST00000362279 71 ntBASIC-0.8□□□□□ -2.54
PKNOX2Q96KN3 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.8□□□□□ -2.54
PKNOX2Q96KN3 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.8□□□□□ -2.54
PKNOX2Q96KN3 RNU6-239P-201ENST00000390990 99 ntBASIC-0.8□□□□□ -2.54
PKNOX2Q96KN3 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.81□□□□□ -2.54
PKNOX2Q96KN3 RNU6-47P-201ENST00000383866 107 ntBASIC-0.81□□□□□ -2.54
PKNOX2Q96KN3 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.81□□□□□ -2.54
PKNOX2Q96KN3 SNORD37.2-201ENST00000391075 66 ntBASIC-0.81□□□□□ -2.54
PKNOX2Q96KN3 RNU6-243P-201ENST00000391140 107 ntBASIC-0.81□□□□□ -2.54
PKNOX2Q96KN3 SNORA3B-201ENST00000391305 131 ntBASIC-0.81□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 192.2 ms