Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 RNU6-402P-201ENST00000410678 103 ntBASIC1.15□□□□□ -2.23
VCPIP1Q96JH7 SNORD83.1-201ENST00000411362 77 ntBASIC1.15□□□□□ -2.23
VCPIP1Q96JH7 BX276092.1-201ENST00000427368 251 ntBASIC1.15□□□□□ -2.23
VCPIP1Q96JH7 AC015818.7-201ENST00000428754 109 ntBASIC1.15□□□□□ -2.23
VCPIP1Q96JH7 AC087499.7-201ENST00000441958 109 ntBASIC1.15□□□□□ -2.23
VCPIP1Q96JH7 RN7SKP12-201ENST00000516275 143 ntBASIC1.15□□□□□ -2.23
VCPIP1Q96JH7 SNORA25.16-201ENST00000516741 121 ntBASIC1.15□□□□□ -2.23
VCPIP1Q96JH7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
VCPIP1Q96JH7 RNY1P1-201ENST00000364372 112 ntBASIC1.14□□□□□ -2.23
VCPIP1Q96JH7 RNU1-36P-201ENST00000365130 165 ntBASIC1.14□□□□□ -2.23
VCPIP1Q96JH7 RNY1P4-201ENST00000384595 115 ntBASIC1.14□□□□□ -2.23
VCPIP1Q96JH7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
VCPIP1Q96JH7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.14□□□□□ -2.23
VCPIP1Q96JH7 RNU7-21P-201ENST00000459430 62 ntBASIC1.14□□□□□ -2.23
VCPIP1Q96JH7 RNU6-531P-201ENST00000516694 104 ntBASIC1.14□□□□□ -2.23
VCPIP1Q96JH7 AC036111.3-201ENST00000526389 112 ntBASIC1.14□□□□□ -2.23
VCPIP1Q96JH7 AC023827.1-201ENST00000569247 97 ntBASIC1.14□□□□□ -2.23
VCPIP1Q96JH7 AL513043.2-201ENST00000573941 143 ntBASIC1.14□□□□□ -2.23
VCPIP1Q96JH7 MIR4295-201ENST00000585286 85 ntBASIC1.14□□□□□ -2.23
VCPIP1Q96JH7 AC020891.4-201ENST00000605745 93 ntBASIC1.14□□□□□ -2.23
VCPIP1Q96JH7 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.14□□□□□ -2.23
VCPIP1Q96JH7 AC025521.1-201ENST00000621624 286 ntBASIC1.14□□□□□ -2.23
VCPIP1Q96JH7 AC008163.1-202ENST00000636004 2889 ntBASIC1.13□□□□□ -2.23
VCPIP1Q96JH7 RNU6-934P-201ENST00000365154 107 ntBASIC1.13□□□□□ -2.23
VCPIP1Q96JH7 RNU6-573P-201ENST00000383938 106 ntBASIC1.13□□□□□ -2.23
VCPIP1Q96JH7 SNORA80D-201ENST00000384488 135 ntBASIC1.13□□□□□ -2.23
VCPIP1Q96JH7 Y_RNA.588-201ENST00000391254 102 ntBASIC1.13□□□□□ -2.23
VCPIP1Q96JH7 Y_RNA.609-201ENST00000410669 89 ntBASIC1.13□□□□□ -2.23
VCPIP1Q96JH7 RNU4-83P-201ENST00000410863 133 ntBASIC1.13□□□□□ -2.23
VCPIP1Q96JH7 RNU7-185P-201ENST00000459215 60 ntBASIC1.13□□□□□ -2.23
VCPIP1Q96JH7 AC087343.1-201ENST00000477341 475 ntBASIC1.13□□□□□ -2.23
VCPIP1Q96JH7 RNU6-267P-201ENST00000516714 103 ntBASIC1.13□□□□□ -2.23
VCPIP1Q96JH7 RNU6-850P-201ENST00000516934 103 ntBASIC1.13□□□□□ -2.23
VCPIP1Q96JH7 MIR4668-201ENST00000582284 70 ntBASIC1.13□□□□□ -2.23
VCPIP1Q96JH7 Y_RNA.57-201ENST00000362806 113 ntBASIC1.12□□□□□ -2.23
VCPIP1Q96JH7 RNU4-58P-201ENST00000363192 141 ntBASIC1.12□□□□□ -2.23
VCPIP1Q96JH7 MIR1257-201ENST00000408490 117 ntBASIC1.12□□□□□ -2.23
VCPIP1Q96JH7 RNU6-592P-201ENST00000411333 103 ntBASIC1.12□□□□□ -2.23
VCPIP1Q96JH7 AC002429.1-201ENST00000437672 148 ntBASIC1.12□□□□□ -2.23
VCPIP1Q96JH7 SNRPGP12-201ENST00000449481 213 ntBASIC1.12□□□□□ -2.23
VCPIP1Q96JH7 RNU7-40P-201ENST00000516397 64 ntBASIC1.12□□□□□ -2.23
VCPIP1Q96JH7 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.12□□□□□ -2.23
VCPIP1Q96JH7 MIR8066-201ENST00000617280 78 ntBASIC1.12□□□□□ -2.23
VCPIP1Q96JH7 Y_RNA.73-201ENST00000362910 113 ntBASIC1.11□□□□□ -2.23
VCPIP1Q96JH7 RNA5SP404-201ENST00000517118 132 ntBASIC1.11□□□□□ -2.23
VCPIP1Q96JH7 MIR4771-2-201ENST00000577758 74 ntBASIC1.11□□□□□ -2.23
VCPIP1Q96JH7 MIR4771-1-201ENST00000582617 74 ntBASIC1.11□□□□□ -2.23
VCPIP1Q96JH7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.11□□□□□ -2.23
VCPIP1Q96JH7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.1□□□□□ -2.23
VCPIP1Q96JH7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
VCPIP1Q96JH7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
VCPIP1Q96JH7 RNU6-219P-201ENST00000364728 107 ntBASIC1.1□□□□□ -2.23
VCPIP1Q96JH7 RNU6-571P-201ENST00000384128 107 ntBASIC1.1□□□□□ -2.23
VCPIP1Q96JH7 SNORD111-201ENST00000408139 94 ntBASIC1.1□□□□□ -2.23
VCPIP1Q96JH7 Y_RNA.620-201ENST00000411009 88 ntBASIC1.1□□□□□ -2.23
VCPIP1Q96JH7 AC022137.1-201ENST00000483735 151 ntBASIC1.1□□□□□ -2.23
VCPIP1Q96JH7 AC013244.2-201ENST00000603396 103 ntBASIC1.1□□□□□ -2.23
VCPIP1Q96JH7 SNORD114-21-201ENST00000606412 72 ntBASIC1.1□□□□□ -2.23
VCPIP1Q96JH7 AC106800.4-201ENST00000614905 153 ntBASIC1.1□□□□□ -2.23
VCPIP1Q96JH7 Y_RNA.13-201ENST00000362403 112 ntBASIC1.09□□□□□ -2.23
VCPIP1Q96JH7 RNU6-675P-201ENST00000384236 104 ntBASIC1.09□□□□□ -2.23
VCPIP1Q96JH7 SNORD12-201ENST00000391002 90 ntBASIC1.09□□□□□ -2.23
VCPIP1Q96JH7 AC103810.9-201ENST00000606688 112 ntBASIC1.09□□□□□ -2.23
VCPIP1Q96JH7 MIR101-2-201ENST00000362195 79 ntBASIC1.08□□□□□ -2.24
VCPIP1Q96JH7 RNU6-497P-201ENST00000365316 104 ntBASIC1.08□□□□□ -2.24
VCPIP1Q96JH7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
VCPIP1Q96JH7 RNU6-1152P-201ENST00000384576 107 ntBASIC1.08□□□□□ -2.24
VCPIP1Q96JH7 MIR516A2-201ENST00000384888 90 ntBASIC1.08□□□□□ -2.24
VCPIP1Q96JH7 MIR516A1-201ENST00000385033 90 ntBASIC1.08□□□□□ -2.24
VCPIP1Q96JH7 MIR125B2-201ENST00000385128 89 ntBASIC1.08□□□□□ -2.24
VCPIP1Q96JH7 RNU6-994P-201ENST00000410507 111 ntBASIC1.08□□□□□ -2.24
VCPIP1Q96JH7 RNU7-90P-201ENST00000459216 62 ntBASIC1.08□□□□□ -2.24
VCPIP1Q96JH7 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
VCPIP1Q96JH7 MIR1245B-201ENST00000636115 69 ntBASIC1.08□□□□□ -2.24
VCPIP1Q96JH7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
VCPIP1Q96JH7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
VCPIP1Q96JH7 RNU1-124P-201ENST00000363861 145 ntBASIC1.07□□□□□ -2.24
VCPIP1Q96JH7 MIR19B1-201ENST00000384829 87 ntBASIC1.07□□□□□ -2.24
VCPIP1Q96JH7 RNU6-519P-201ENST00000410590 108 ntBASIC1.07□□□□□ -2.24
VCPIP1Q96JH7 RPS26P5-201ENST00000418544 335 ntBASIC1.07□□□□□ -2.24
VCPIP1Q96JH7 SNORD124-201ENST00000459577 104 ntBASIC1.07□□□□□ -2.24
VCPIP1Q96JH7 RNU7-156P-201ENST00000517214 74 ntBASIC1.07□□□□□ -2.24
VCPIP1Q96JH7 MIR6082-201ENST00000613604 109 ntBASIC1.07□□□□□ -2.24
VCPIP1Q96JH7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
VCPIP1Q96JH7 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
VCPIP1Q96JH7 RNU6-242P-201ENST00000384359 107 ntBASIC1.06□□□□□ -2.24
VCPIP1Q96JH7 SNORD100-201ENST00000408573 76 ntBASIC1.06□□□□□ -2.24
VCPIP1Q96JH7 Y_RNA.611-201ENST00000410682 108 ntBASIC1.06□□□□□ -2.24
VCPIP1Q96JH7 RNU7-106P-201ENST00000459514 67 ntBASIC1.06□□□□□ -2.24
VCPIP1Q96JH7 MIR4676-201ENST00000583078 72 ntBASIC1.06□□□□□ -2.24
VCPIP1Q96JH7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
VCPIP1Q96JH7 Y_RNA.205-201ENST00000364128 113 ntBASIC1.05□□□□□ -2.24
VCPIP1Q96JH7 RNU6-364P-201ENST00000384387 107 ntBASIC1.05□□□□□ -2.24
VCPIP1Q96JH7 RNU6-243P-201ENST00000391140 107 ntBASIC1.05□□□□□ -2.24
VCPIP1Q96JH7 RNU6-1254P-201ENST00000391266 104 ntBASIC1.05□□□□□ -2.24
VCPIP1Q96JH7 SNORD63B-201ENST00000411005 70 ntBASIC1.05□□□□□ -2.24
VCPIP1Q96JH7 AL161932.1-201ENST00000437408 146 ntBASIC1.05□□□□□ -2.24
VCPIP1Q96JH7 RNA5SP436-201ENST00000516020 115 ntBASIC1.05□□□□□ -2.24
VCPIP1Q96JH7 RNU6-1194P-201ENST00000516208 104 ntBASIC1.05□□□□□ -2.24
VCPIP1Q96JH7 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 244.3 ms