Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AL096861.1-201ENST00000610899 123 ntBASIC1.58□□□□□ -2.16
CHFRQ96EP1 RNU6-208P-201ENST00000362431 107 ntBASIC1.57□□□□□ -2.16
CHFRQ96EP1 SNORA25.3-201ENST00000363205 127 ntBASIC1.57□□□□□ -2.16
CHFRQ96EP1 RNA5SP48-201ENST00000363969 126 ntBASIC1.57□□□□□ -2.16
CHFRQ96EP1 RNA5SP363-201ENST00000365072 115 ntBASIC1.57□□□□□ -2.16
CHFRQ96EP1 snoU13.17-201ENST00000458802 104 ntBASIC1.57□□□□□ -2.16
CHFRQ96EP1 MIR8063-201ENST00000621930 81 ntBASIC1.57□□□□□ -2.16
CHFRQ96EP1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CHFRQ96EP1 RNU5F-1-201ENST00000362507 117 ntBASIC1.56□□□□□ -2.16
CHFRQ96EP1 SNORA7.1-201ENST00000363750 139 ntBASIC1.56□□□□□ -2.16
CHFRQ96EP1 MIR517C-201ENST00000385103 95 ntBASIC1.56□□□□□ -2.16
CHFRQ96EP1 MIR518E-201ENST00000385252 88 ntBASIC1.56□□□□□ -2.16
CHFRQ96EP1 RNU6-205P-201ENST00000390858 107 ntBASIC1.56□□□□□ -2.16
CHFRQ96EP1 RNU6-243P-201ENST00000391140 107 ntBASIC1.56□□□□□ -2.16
CHFRQ96EP1 RNU1-78P-201ENST00000391248 165 ntBASIC1.56□□□□□ -2.16
CHFRQ96EP1 RNU6-587P-201ENST00000391282 106 ntBASIC1.56□□□□□ -2.16
CHFRQ96EP1 RNU6-1165P-201ENST00000410119 107 ntBASIC1.56□□□□□ -2.16
CHFRQ96EP1 AC245517.4-201ENST00000448601 281 ntBASIC1.56□□□□□ -2.16
CHFRQ96EP1 RNU6-322P-201ENST00000516010 103 ntBASIC1.56□□□□□ -2.16
CHFRQ96EP1 Y_RNA.681-201ENST00000516445 113 ntBASIC1.56□□□□□ -2.16
CHFRQ96EP1 RNU6-807P-201ENST00000516805 107 ntBASIC1.56□□□□□ -2.16
CHFRQ96EP1 RNU1-92P-201ENST00000517017 135 ntBASIC1.56□□□□□ -2.16
CHFRQ96EP1 RNU6-303P-201ENST00000517091 106 ntBASIC1.56□□□□□ -2.16
CHFRQ96EP1 MIR4421-201ENST00000578133 69 ntBASIC1.56□□□□□ -2.16
CHFRQ96EP1 SNORD92-201ENST00000585078 85 ntBASIC1.56□□□□□ -2.16
CHFRQ96EP1 MIR1297-201ENST00000637311 77 ntBASIC1.56□□□□□ -2.16
CHFRQ96EP1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CHFRQ96EP1 RNU6-330P-201ENST00000363015 107 ntBASIC1.55□□□□□ -2.16
CHFRQ96EP1 SNORD115-31-201ENST00000365318 82 ntBASIC1.55□□□□□ -2.16
CHFRQ96EP1 Y_RNA.588-201ENST00000391254 102 ntBASIC1.55□□□□□ -2.16
CHFRQ96EP1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.55□□□□□ -2.16
CHFRQ96EP1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CHFRQ96EP1 AC015818.7-201ENST00000428754 109 ntBASIC1.55□□□□□ -2.16
CHFRQ96EP1 RNU6-531P-201ENST00000516694 104 ntBASIC1.55□□□□□ -2.16
CHFRQ96EP1 SNORA25.16-201ENST00000516741 121 ntBASIC1.55□□□□□ -2.16
CHFRQ96EP1 MIR4491-201ENST00000581087 68 ntBASIC1.55□□□□□ -2.16
CHFRQ96EP1 ZNF209P-201ENST00000593450 2304 ntBASIC1.54□□□□□ -2.16
CHFRQ96EP1 Y_RNA.12-201ENST00000362393 112 ntBASIC1.54□□□□□ -2.16
CHFRQ96EP1 Y_RNA.264-201ENST00000364665 102 ntBASIC1.54□□□□□ -2.16
CHFRQ96EP1 RNU6-649P-201ENST00000384463 107 ntBASIC1.54□□□□□ -2.16
CHFRQ96EP1 MIR548U-201ENST00000390728 81 ntBASIC1.54□□□□□ -2.16
CHFRQ96EP1 MIR1276-201ENST00000408707 83 ntBASIC1.54□□□□□ -2.16
CHFRQ96EP1 Y_RNA.596-201ENST00000410462 109 ntBASIC1.54□□□□□ -2.16
CHFRQ96EP1 SNORD63B-201ENST00000411005 70 ntBASIC1.54□□□□□ -2.16
CHFRQ96EP1 RNU6-922P-201ENST00000516753 99 ntBASIC1.54□□□□□ -2.16
CHFRQ96EP1 SNORA31.24-201ENST00000517232 57 ntBASIC1.54□□□□□ -2.16
CHFRQ96EP1 AP003716.2-201ENST00000528260 108 ntBASIC1.54□□□□□ -2.16
CHFRQ96EP1 MIR4264-201ENST00000583520 66 ntBASIC1.54□□□□□ -2.16
CHFRQ96EP1 AL357312.1-201ENST00000603879 298 ntBASIC1.54□□□□□ -2.16
CHFRQ96EP1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CHFRQ96EP1 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.54□□□□□ -2.16
CHFRQ96EP1 SNORD33-201ENST00000362761 85 ntBASIC1.53□□□□□ -2.16
CHFRQ96EP1 Y_RNA.205-201ENST00000364128 113 ntBASIC1.53□□□□□ -2.16
CHFRQ96EP1 RNU6-396P-201ENST00000365369 105 ntBASIC1.53□□□□□ -2.16
CHFRQ96EP1 RNA5SP259-201ENST00000365541 109 ntBASIC1.53□□□□□ -2.16
CHFRQ96EP1 RNU6-1241P-201ENST00000384536 107 ntBASIC1.53□□□□□ -2.16
CHFRQ96EP1 RNU6-466P-201ENST00000391224 103 ntBASIC1.53□□□□□ -2.16
CHFRQ96EP1 AL606490.4-201ENST00000423117 127 ntBASIC1.53□□□□□ -2.16
CHFRQ96EP1 AL354695.1-201ENST00000427935 228 ntBASIC1.53□□□□□ -2.16
CHFRQ96EP1 JTBP1-201ENST00000441314 247 ntBASIC1.53□□□□□ -2.16
CHFRQ96EP1 RNU7-62P-201ENST00000458856 62 ntBASIC1.53□□□□□ -2.16
CHFRQ96EP1 MIR2113-201ENST00000459007 91 ntBASIC1.53□□□□□ -2.16
CHFRQ96EP1 RNU6-1194P-201ENST00000516208 104 ntBASIC1.53□□□□□ -2.16
CHFRQ96EP1 RNU6-53P-201ENST00000365367 106 ntBASIC1.52□□□□□ -2.17
CHFRQ96EP1 Y_RNA.355-201ENST00000365462 98 ntBASIC1.52□□□□□ -2.17
CHFRQ96EP1 RNU6-800P-201ENST00000384473 103 ntBASIC1.52□□□□□ -2.17
CHFRQ96EP1 MIR513A1-201ENST00000385138 129 ntBASIC1.52□□□□□ -2.17
CHFRQ96EP1 RPL30P7-201ENST00000479312 323 ntBASIC1.52□□□□□ -2.17
CHFRQ96EP1 TRAJ51-201ENST00000504127 63 ntBASIC1.52□□□□□ -2.17
CHFRQ96EP1 YWHAEP2-201ENST00000580066 112 ntBASIC1.52□□□□□ -2.17
CHFRQ96EP1 YWHAEP3-201ENST00000582767 121 ntBASIC1.52□□□□□ -2.17
CHFRQ96EP1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.52□□□□□ -2.17
CHFRQ96EP1 MIR6516-201ENST00000630554 81 ntBASIC1.52□□□□□ -2.17
CHFRQ96EP1 U6.111-201ENST00000636093 83 ntBASIC1.52□□□□□ -2.17
CHFRQ96EP1 MT-TF-201ENST00000387314 71 ntBASIC1.51□□□□□ -2.17
CHFRQ96EP1 MT-TN-201ENST00000387400 73 ntBASIC1.51□□□□□ -2.17
CHFRQ96EP1 SNORD30.1-201ENST00000391309 70 ntBASIC1.51□□□□□ -2.17
CHFRQ96EP1 MIR1304-201ENST00000408243 91 ntBASIC1.51□□□□□ -2.17
CHFRQ96EP1 MIR1185-1-201ENST00000408598 86 ntBASIC1.51□□□□□ -2.17
CHFRQ96EP1 RNU2-59P-201ENST00000410482 191 ntBASIC1.51□□□□□ -2.17
CHFRQ96EP1 AL157834.3-201ENST00000615543 103 ntBASIC1.51□□□□□ -2.17
CHFRQ96EP1 Y_RNA.36-201ENST00000362602 112 ntBASIC1.5□□□□□ -2.17
CHFRQ96EP1 RNU6-654P-201ENST00000364373 107 ntBASIC1.5□□□□□ -2.17
CHFRQ96EP1 RNU6-1051P-201ENST00000365471 102 ntBASIC1.5□□□□□ -2.17
CHFRQ96EP1 RNU6-154P-201ENST00000384306 106 ntBASIC1.5□□□□□ -2.17
CHFRQ96EP1 MIR942-201ENST00000401111 86 ntBASIC1.5□□□□□ -2.17
CHFRQ96EP1 SNORD100-201ENST00000408573 76 ntBASIC1.5□□□□□ -2.17
CHFRQ96EP1 RNA5SP95-201ENST00000410319 137 ntBASIC1.5□□□□□ -2.17
CHFRQ96EP1 RNU7-195P-201ENST00000458793 62 ntBASIC1.5□□□□□ -2.17
CHFRQ96EP1 RNU11-2P-201ENST00000516898 142 ntBASIC1.5□□□□□ -2.17
CHFRQ96EP1 RNU6-902P-201ENST00000517212 91 ntBASIC1.5□□□□□ -2.17
CHFRQ96EP1 MIR26B-201ENST00000362251 77 ntBASIC1.49□□□□□ -2.17
CHFRQ96EP1 RNU4-58P-201ENST00000363192 141 ntBASIC1.49□□□□□ -2.17
CHFRQ96EP1 Y_RNA.118-201ENST00000363300 101 ntBASIC1.49□□□□□ -2.17
CHFRQ96EP1 Y_RNA.207-201ENST00000364142 106 ntBASIC1.49□□□□□ -2.17
CHFRQ96EP1 RNU6-291P-201ENST00000384720 107 ntBASIC1.49□□□□□ -2.17
CHFRQ96EP1 AC079140.2-201ENST00000506193 142 ntBASIC1.49□□□□□ -2.17
CHFRQ96EP1 MIR2115-201ENST00000516657 100 ntBASIC1.49□□□□□ -2.17
CHFRQ96EP1 RNU7-156P-201ENST00000517214 74 ntBASIC1.49□□□□□ -2.17
CHFRQ96EP1 MIR3937-201ENST00000580135 106 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 187.1 ms