Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 MIR573-201ENST00000384964 99 ntBASIC0.87□□□□□ -2.27
CTHRC1Q96CG8 MIR532-201ENST00000385025 91 ntBASIC0.87□□□□□ -2.27
CTHRC1Q96CG8 SNRPGP12-201ENST00000449481 213 ntBASIC0.87□□□□□ -2.27
CTHRC1Q96CG8 AC002350.1-201ENST00000490759 375 ntBASIC0.87□□□□□ -2.27
CTHRC1Q96CG8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.87□□□□□ -2.27
CTHRC1Q96CG8 RNU6-850P-201ENST00000516934 103 ntBASIC0.87□□□□□ -2.27
CTHRC1Q96CG8 AC011195.1-201ENST00000578177 177 ntBASIC0.87□□□□□ -2.27
CTHRC1Q96CG8 AL353765.1-201ENST00000605514 183 ntBASIC0.87□□□□□ -2.27
CTHRC1Q96CG8 Y_RNA.818-201ENST00000618813 71 ntBASIC0.87□□□□□ -2.27
CTHRC1Q96CG8 MIR450A1-201ENST00000362262 91 ntBASIC0.86□□□□□ -2.27
CTHRC1Q96CG8 Y_RNA.95-201ENST00000363079 95 ntBASIC0.86□□□□□ -2.27
CTHRC1Q96CG8 Y_RNA.96-201ENST00000363092 109 ntBASIC0.86□□□□□ -2.27
CTHRC1Q96CG8 RNU6-1125P-201ENST00000363601 107 ntBASIC0.86□□□□□ -2.27
CTHRC1Q96CG8 Y_RNA.173-201ENST00000363776 113 ntBASIC0.86□□□□□ -2.27
CTHRC1Q96CG8 Y_RNA.342-201ENST00000365352 113 ntBASIC0.86□□□□□ -2.27
CTHRC1Q96CG8 RNU6-480P-201ENST00000384332 107 ntBASIC0.86□□□□□ -2.27
CTHRC1Q96CG8 RNU6-291P-201ENST00000384720 107 ntBASIC0.86□□□□□ -2.27
CTHRC1Q96CG8 MIR590-201ENST00000385008 97 ntBASIC0.86□□□□□ -2.27
CTHRC1Q96CG8 RNU6-1223P-201ENST00000517124 104 ntBASIC0.86□□□□□ -2.27
CTHRC1Q96CG8 AC138907.6-201ENST00000568401 126 ntBASIC0.86□□□□□ -2.27
CTHRC1Q96CG8 AC138869.1-201ENST00000568623 124 ntBASIC0.86□□□□□ -2.27
CTHRC1Q96CG8 MIR3613-201ENST00000579844 87 ntBASIC0.86□□□□□ -2.27
CTHRC1Q96CG8 MIR6779-201ENST00000617283 64 ntBASIC0.86□□□□□ -2.27
CTHRC1Q96CG8 RNU6-170P-201ENST00000362832 104 ntBASIC0.85□□□□□ -2.27
CTHRC1Q96CG8 MIR520E-201ENST00000384867 87 ntBASIC0.85□□□□□ -2.27
CTHRC1Q96CG8 MIR598-201ENST00000384868 97 ntBASIC0.85□□□□□ -2.27
CTHRC1Q96CG8 SNORA19.1-201ENST00000410656 129 ntBASIC0.85□□□□□ -2.27
CTHRC1Q96CG8 AC109327.2-201ENST00000448339 378 ntBASIC0.85□□□□□ -2.27
CTHRC1Q96CG8 RPS29P1-201ENST00000465274 159 ntBASIC0.85□□□□□ -2.27
CTHRC1Q96CG8 RNU6-469P-201ENST00000516253 101 ntBASIC0.85□□□□□ -2.27
CTHRC1Q96CG8 MIR6857-201ENST00000613267 93 ntBASIC0.85□□□□□ -2.27
CTHRC1Q96CG8 RNA5SP325-201ENST00000363756 130 ntBASIC0.84□□□□□ -2.27
CTHRC1Q96CG8 RNU6-147P-201ENST00000383983 107 ntBASIC0.84□□□□□ -2.27
CTHRC1Q96CG8 MIR608-201ENST00000384820 100 ntBASIC0.84□□□□□ -2.27
CTHRC1Q96CG8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.84□□□□□ -2.27
CTHRC1Q96CG8 MIR3612-201ENST00000579753 87 ntBASIC0.84□□□□□ -2.27
CTHRC1Q96CG8 MIR151B-201ENST00000584249 96 ntBASIC0.84□□□□□ -2.27
CTHRC1Q96CG8 RNU6-86P-201ENST00000606534 107 ntBASIC0.84□□□□□ -2.27
CTHRC1Q96CG8 Y_RNA.57-201ENST00000362806 113 ntBASIC0.83□□□□□ -2.28
CTHRC1Q96CG8 Y_RNA.93-201ENST00000363066 109 ntBASIC0.83□□□□□ -2.28
CTHRC1Q96CG8 RNU6-1163P-201ENST00000364516 107 ntBASIC0.83□□□□□ -2.28
CTHRC1Q96CG8 RNU4-45P-201ENST00000365469 141 ntBASIC0.83□□□□□ -2.28
CTHRC1Q96CG8 RNU6-32P-201ENST00000383948 107 ntBASIC0.83□□□□□ -2.28
CTHRC1Q96CG8 RNU6-13P-201ENST00000384248 107 ntBASIC0.83□□□□□ -2.28
CTHRC1Q96CG8 RNU6-12P-201ENST00000384604 107 ntBASIC0.83□□□□□ -2.28
CTHRC1Q96CG8 RNU6-41P-201ENST00000384741 107 ntBASIC0.83□□□□□ -2.28
CTHRC1Q96CG8 AC244098.3-201ENST00000424803 96 ntBASIC0.83□□□□□ -2.28
CTHRC1Q96CG8 AC092628.1-201ENST00000436250 252 ntBASIC0.83□□□□□ -2.28
CTHRC1Q96CG8 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.83□□□□□ -2.28
CTHRC1Q96CG8 MIR3973-201ENST00000579824 107 ntBASIC0.83□□□□□ -2.28
CTHRC1Q96CG8 MIR6788-201ENST00000618842 66 ntBASIC0.83□□□□□ -2.28
CTHRC1Q96CG8 uc_338.16-201ENST00000621804 95 ntBASIC0.83□□□□□ -2.28
CTHRC1Q96CG8 Y_RNA.107-201ENST00000363190 121 ntBASIC0.82□□□□□ -2.28
CTHRC1Q96CG8 RNU6-813P-201ENST00000384691 107 ntBASIC0.82□□□□□ -2.28
CTHRC1Q96CG8 SNORD63B-201ENST00000411005 70 ntBASIC0.82□□□□□ -2.28
CTHRC1Q96CG8 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
CTHRC1Q96CG8 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
CTHRC1Q96CG8 RNU6-795P-201ENST00000516323 103 ntBASIC0.82□□□□□ -2.28
CTHRC1Q96CG8 SNORA31.14-201ENST00000516728 116 ntBASIC0.82□□□□□ -2.28
CTHRC1Q96CG8 RNU6-135P-201ENST00000516769 101 ntBASIC0.82□□□□□ -2.28
CTHRC1Q96CG8 AC211469.2-201ENST00000605461 205 ntBASIC0.82□□□□□ -2.28
CTHRC1Q96CG8 PVT1_3.1-201ENST00000620853 95 ntBASIC0.82□□□□□ -2.28
CTHRC1Q96CG8 MIR2052-201ENST00000636055 55 ntBASIC0.82□□□□□ -2.28
CTHRC1Q96CG8 RNU6-243P-201ENST00000391140 107 ntBASIC0.81□□□□□ -2.28
CTHRC1Q96CG8 MIR548J-201ENST00000408833 112 ntBASIC0.81□□□□□ -2.28
CTHRC1Q96CG8 RNA5SP222-201ENST00000411039 105 ntBASIC0.81□□□□□ -2.28
CTHRC1Q96CG8 TRAJ51-201ENST00000504127 63 ntBASIC0.81□□□□□ -2.28
CTHRC1Q96CG8 RNU6-109P-201ENST00000516364 107 ntBASIC0.81□□□□□ -2.28
CTHRC1Q96CG8 RNU6-184P-201ENST00000516514 107 ntBASIC0.81□□□□□ -2.28
CTHRC1Q96CG8 RNU6-537P-201ENST00000517277 103 ntBASIC0.81□□□□□ -2.28
CTHRC1Q96CG8 AC012531.4-201ENST00000616509 177 ntBASIC0.81□□□□□ -2.28
CTHRC1Q96CG8 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.81□□□□□ -2.28
CTHRC1Q96CG8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CTHRC1Q96CG8 Y_RNA.32-201ENST00000362589 110 ntBASIC0.8□□□□□ -2.28
CTHRC1Q96CG8 RNU6-153P-201ENST00000364422 104 ntBASIC0.8□□□□□ -2.28
CTHRC1Q96CG8 RNU6-1254P-201ENST00000391266 104 ntBASIC0.8□□□□□ -2.28
CTHRC1Q96CG8 Y_RNA.705-201ENST00000516862 110 ntBASIC0.8□□□□□ -2.28
CTHRC1Q96CG8 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.8□□□□□ -2.28
CTHRC1Q96CG8 AC091304.10-201ENST00000641554 121 ntBASIC0.8□□□□□ -2.28
CTHRC1Q96CG8 RNA5SP245-201ENST00000364239 121 ntBASIC0.79□□□□□ -2.28
CTHRC1Q96CG8 Y_RNA.495-201ENST00000384435 112 ntBASIC0.79□□□□□ -2.28
CTHRC1Q96CG8 MIR516A2-201ENST00000384888 90 ntBASIC0.79□□□□□ -2.28
CTHRC1Q96CG8 MIR516A1-201ENST00000385033 90 ntBASIC0.79□□□□□ -2.28
CTHRC1Q96CG8 MIR519A1-201ENST00000385257 85 ntBASIC0.79□□□□□ -2.28
CTHRC1Q96CG8 RNU6-972P-201ENST00000391208 107 ntBASIC0.79□□□□□ -2.28
CTHRC1Q96CG8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.79□□□□□ -2.28
CTHRC1Q96CG8 Y_RNA.809-201ENST00000516058 95 ntBASIC0.79□□□□□ -2.28
CTHRC1Q96CG8 SNORA40.13-201ENST00000516379 120 ntBASIC0.79□□□□□ -2.28
CTHRC1Q96CG8 MIR4777-201ENST00000583710 86 ntBASIC0.79□□□□□ -2.28
CTHRC1Q96CG8 MIR18A-201ENST00000362310 71 ntBASIC0.78□□□□□ -2.28
CTHRC1Q96CG8 RNU6-1244P-201ENST00000363614 108 ntBASIC0.78□□□□□ -2.28
CTHRC1Q96CG8 Y_RNA.205-201ENST00000364128 113 ntBASIC0.78□□□□□ -2.28
CTHRC1Q96CG8 Y_RNA.467-201ENST00000384297 102 ntBASIC0.78□□□□□ -2.28
CTHRC1Q96CG8 RNU6-110P-201ENST00000384508 104 ntBASIC0.78□□□□□ -2.28
CTHRC1Q96CG8 MIR181B2-201ENST00000385004 89 ntBASIC0.78□□□□□ -2.28
CTHRC1Q96CG8 MIR644A-201ENST00000385262 94 ntBASIC0.78□□□□□ -2.28
CTHRC1Q96CG8 AC097635.1-201ENST00000450678 155 ntBASIC0.78□□□□□ -2.28
CTHRC1Q96CG8 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
CTHRC1Q96CG8 MIR3678-201ENST00000578455 94 ntBASIC0.78□□□□□ -2.28
CTHRC1Q96CG8 AP001318.4-201ENST00000616637 121 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms