Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL035470.1-201ENST00000622571 220 ntBASIC0.64□□□□□ -2.31
CHMP4CQ96CF2 RNA5SP347-201ENST00000362445 119 ntBASIC0.63□□□□□ -2.31
CHMP4CQ96CF2 RNU6-170P-201ENST00000362832 104 ntBASIC0.63□□□□□ -2.31
CHMP4CQ96CF2 SNORA8.2-201ENST00000384372 139 ntBASIC0.63□□□□□ -2.31
CHMP4CQ96CF2 RNU6-1117P-201ENST00000384525 104 ntBASIC0.63□□□□□ -2.31
CHMP4CQ96CF2 SNORD28-201ENST00000384706 75 ntBASIC0.63□□□□□ -2.31
CHMP4CQ96CF2 SNRPGP12-201ENST00000449481 213 ntBASIC0.63□□□□□ -2.31
CHMP4CQ96CF2 AC244505.6-201ENST00000452829 130 ntBASIC0.63□□□□□ -2.31
CHMP4CQ96CF2 SCARNA16.5-201ENST00000517114 183 ntBASIC0.63□□□□□ -2.31
CHMP4CQ96CF2 Y_RNA.49-201ENST00000362714 112 ntBASIC0.62□□□□□ -2.31
CHMP4CQ96CF2 SNORD115-24-201ENST00000363528 82 ntBASIC0.62□□□□□ -2.31
CHMP4CQ96CF2 Y_RNA.261-201ENST00000364631 102 ntBASIC0.62□□□□□ -2.31
CHMP4CQ96CF2 TRAJ51-201ENST00000504127 63 ntBASIC0.62□□□□□ -2.31
CHMP4CQ96CF2 RNA5SP268-201ENST00000516828 124 ntBASIC0.62□□□□□ -2.31
CHMP4CQ96CF2 RNA5SP47-201ENST00000517230 109 ntBASIC0.62□□□□□ -2.31
CHMP4CQ96CF2 AC244669.1-204ENST00000621564 178 ntBASIC0.62□□□□□ -2.31
CHMP4CQ96CF2 AC243829.3-201ENST00000622177 108 ntBASIC0.62□□□□□ -2.31
CHMP4CQ96CF2 SNORD38.1-201ENST00000363863 68 ntBASIC0.61□□□□□ -2.31
CHMP4CQ96CF2 Y_RNA.353-201ENST00000365440 108 ntBASIC0.61□□□□□ -2.31
CHMP4CQ96CF2 SPINT5P-201ENST00000448174 155 ntBASIC0.61□□□□□ -2.31
CHMP4CQ96CF2 RNA5SP227-201ENST00000516184 113 ntBASIC0.61□□□□□ -2.31
CHMP4CQ96CF2 SNORA25.18-201ENST00000607153 114 ntBASIC0.61□□□□□ -2.31
CHMP4CQ96CF2 AL365222.1-201ENST00000614661 98 ntBASIC0.61□□□□□ -2.31
CHMP4CQ96CF2 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.61□□□□□ -2.31
CHMP4CQ96CF2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.61□□□□□ -2.31
CHMP4CQ96CF2 SNORA36.1-201ENST00000363424 132 ntBASIC0.6□□□□□ -2.31
CHMP4CQ96CF2 Y_RNA.549-201ENST00000384657 102 ntBASIC0.6□□□□□ -2.31
CHMP4CQ96CF2 Y_RNA.563-201ENST00000384707 108 ntBASIC0.6□□□□□ -2.31
CHMP4CQ96CF2 MIR518A1-201ENST00000385068 85 ntBASIC0.6□□□□□ -2.31
CHMP4CQ96CF2 AC097635.1-201ENST00000450678 155 ntBASIC0.6□□□□□ -2.31
CHMP4CQ96CF2 RNU6-850P-201ENST00000516934 103 ntBASIC0.6□□□□□ -2.31
CHMP4CQ96CF2 AC010487.4-201ENST00000637027 61 ntBASIC0.6□□□□□ -2.31
CHMP4CQ96CF2 AC091304.10-201ENST00000641554 121 ntBASIC0.6□□□□□ -2.31
CHMP4CQ96CF2 SNORD114-23-201ENST00000363536 72 ntBASIC0.59□□□□□ -2.31
CHMP4CQ96CF2 RNU6-880P-201ENST00000384526 107 ntBASIC0.59□□□□□ -2.31
CHMP4CQ96CF2 MIR599-201ENST00000385069 95 ntBASIC0.59□□□□□ -2.31
CHMP4CQ96CF2 SNORD63B-201ENST00000411005 70 ntBASIC0.59□□□□□ -2.31
CHMP4CQ96CF2 AC096720.1-201ENST00000604441 183 ntBASIC0.59□□□□□ -2.31
CHMP4CQ96CF2 AL442128.1-201ENST00000615151 90 ntBASIC0.59□□□□□ -2.31
CHMP4CQ96CF2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
CHMP4CQ96CF2 Y_RNA.205-201ENST00000364128 113 ntBASIC0.58□□□□□ -2.32
CHMP4CQ96CF2 RNU6-1201P-201ENST00000384227 107 ntBASIC0.58□□□□□ -2.32
CHMP4CQ96CF2 SNORD116-21-201ENST00000384507 92 ntBASIC0.58□□□□□ -2.32
CHMP4CQ96CF2 MIR193B-201ENST00000384907 83 ntBASIC0.58□□□□□ -2.32
CHMP4CQ96CF2 AL353813.1-201ENST00000440700 253 ntBASIC0.58□□□□□ -2.32
CHMP4CQ96CF2 AC068339.1-201ENST00000526965 141 ntBASIC0.58□□□□□ -2.32
CHMP4CQ96CF2 MIR4711-201ENST00000578274 70 ntBASIC0.58□□□□□ -2.32
CHMP4CQ96CF2 RNU6-90P-201ENST00000606352 106 ntBASIC0.58□□□□□ -2.32
CHMP4CQ96CF2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
CHMP4CQ96CF2 Y_RNA.342-201ENST00000365352 113 ntBASIC0.57□□□□□ -2.32
CHMP4CQ96CF2 RNU6-22P-201ENST00000384355 107 ntBASIC0.57□□□□□ -2.32
CHMP4CQ96CF2 MIR548L-201ENST00000408303 86 ntBASIC0.57□□□□□ -2.32
CHMP4CQ96CF2 MIR548G-201ENST00000408442 89 ntBASIC0.57□□□□□ -2.32
CHMP4CQ96CF2 RNU6-1006P-201ENST00000516998 103 ntBASIC0.57□□□□□ -2.32
CHMP4CQ96CF2 MIR6828-201ENST00000636181 60 ntBASIC0.57□□□□□ -2.32
CHMP4CQ96CF2 SNORD118-201ENST00000363593 134 ntBASIC0.56□□□□□ -2.32
CHMP4CQ96CF2 SNORA68.3-201ENST00000515906 83 ntBASIC0.56□□□□□ -2.32
CHMP4CQ96CF2 Y_RNA.809-201ENST00000516058 95 ntBASIC0.56□□□□□ -2.32
CHMP4CQ96CF2 RNU6-412P-201ENST00000516434 106 ntBASIC0.56□□□□□ -2.32
CHMP4CQ96CF2 MIR1273G-201ENST00000577677 100 ntBASIC0.56□□□□□ -2.32
CHMP4CQ96CF2 RNU6-1099P-201ENST00000363533 107 ntBASIC0.55□□□□□ -2.32
CHMP4CQ96CF2 MIR519A1-201ENST00000385257 85 ntBASIC0.55□□□□□ -2.32
CHMP4CQ96CF2 AC114737.2-201ENST00000421583 173 ntBASIC0.55□□□□□ -2.32
CHMP4CQ96CF2 RNU7-195P-201ENST00000458793 62 ntBASIC0.55□□□□□ -2.32
CHMP4CQ96CF2 RNU7-104P-201ENST00000459398 79 ntBASIC0.55□□□□□ -2.32
CHMP4CQ96CF2 MIR4694-201ENST00000578534 80 ntBASIC0.55□□□□□ -2.32
CHMP4CQ96CF2 Y_RNA.221-201ENST00000364248 96 ntBASIC0.54□□□□□ -2.32
CHMP4CQ96CF2 Y_RNA.247-201ENST00000364500 92 ntBASIC0.54□□□□□ -2.32
CHMP4CQ96CF2 U8.6-201ENST00000364939 135 ntBASIC0.54□□□□□ -2.32
CHMP4CQ96CF2 RNU6-1168P-201ENST00000390831 104 ntBASIC0.54□□□□□ -2.32
CHMP4CQ96CF2 RNU6-1154P-201ENST00000391001 104 ntBASIC0.54□□□□□ -2.32
CHMP4CQ96CF2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.54□□□□□ -2.32
CHMP4CQ96CF2 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.54□□□□□ -2.32
CHMP4CQ96CF2 RNU6-313P-201ENST00000516317 112 ntBASIC0.54□□□□□ -2.32
CHMP4CQ96CF2 RNU6-789P-201ENST00000517105 102 ntBASIC0.54□□□□□ -2.32
CHMP4CQ96CF2 MIR5009-201ENST00000578736 100 ntBASIC0.54□□□□□ -2.32
CHMP4CQ96CF2 RNU6-716P-201ENST00000365621 103 ntBASIC0.53□□□□□ -2.32
CHMP4CQ96CF2 Y_RNA.377-201ENST00000365644 108 ntBASIC0.53□□□□□ -2.32
CHMP4CQ96CF2 RNU4-61P-201ENST00000411243 107 ntBASIC0.53□□□□□ -2.32
CHMP4CQ96CF2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.53□□□□□ -2.32
CHMP4CQ96CF2 RNU6-479P-201ENST00000516348 105 ntBASIC0.53□□□□□ -2.32
CHMP4CQ96CF2 MIR7107-201ENST00000611489 80 ntBASIC0.53□□□□□ -2.32
CHMP4CQ96CF2 MIR5087-201ENST00000635826 76 ntBASIC0.53□□□□□ -2.32
CHMP4CQ96CF2 Y_RNA.35-201ENST00000362601 101 ntBASIC0.52□□□□□ -2.33
CHMP4CQ96CF2 Y_RNA.57-201ENST00000362806 113 ntBASIC0.52□□□□□ -2.33
CHMP4CQ96CF2 Y_RNA.281-201ENST00000364774 94 ntBASIC0.52□□□□□ -2.33
CHMP4CQ96CF2 SNORA50A-201ENST00000384225 134 ntBASIC0.52□□□□□ -2.33
CHMP4CQ96CF2 RNU6-476P-201ENST00000384726 107 ntBASIC0.52□□□□□ -2.33
CHMP4CQ96CF2 MIR577-201ENST00000385196 96 ntBASIC0.52□□□□□ -2.33
CHMP4CQ96CF2 RNU6-1064P-201ENST00000410626 104 ntBASIC0.52□□□□□ -2.33
CHMP4CQ96CF2 AC067863.3-201ENST00000624172 122 ntBASIC0.52□□□□□ -2.33
CHMP4CQ96CF2 MIRLET7D-201ENST00000362263 87 ntBASIC0.51□□□□□ -2.33
CHMP4CQ96CF2 RNY3P2-201ENST00000362918 102 ntBASIC0.51□□□□□ -2.33
CHMP4CQ96CF2 RNA5SP205-201ENST00000364653 136 ntBASIC0.51□□□□□ -2.33
CHMP4CQ96CF2 RNU6-1144P-201ENST00000384247 104 ntBASIC0.51□□□□□ -2.33
CHMP4CQ96CF2 MIR516A2-201ENST00000384888 90 ntBASIC0.51□□□□□ -2.33
CHMP4CQ96CF2 MIR516A1-201ENST00000385033 90 ntBASIC0.51□□□□□ -2.33
CHMP4CQ96CF2 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.51□□□□□ -2.33
CHMP4CQ96CF2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.51□□□□□ -2.33
CHMP4CQ96CF2 RNU7-161P-201ENST00000517289 62 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 211.5 ms