Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MIR548H5-201ENST00000580314 60 ntBASIC0.8□□□□□ -2.28
TRIM43Q96BQ3 RNU7-10P-201ENST00000607194 63 ntBASIC0.8□□□□□ -2.28
TRIM43Q96BQ3 MIR330-201ENST00000362196 94 ntBASIC0.79□□□□□ -2.28
TRIM43Q96BQ3 RNU6-834P-201ENST00000362367 110 ntBASIC0.79□□□□□ -2.28
TRIM43Q96BQ3 RNU6-1313P-201ENST00000362622 102 ntBASIC0.79□□□□□ -2.28
TRIM43Q96BQ3 Y_RNA.56-201ENST00000362798 112 ntBASIC0.79□□□□□ -2.28
TRIM43Q96BQ3 RNU6-1056P-201ENST00000383996 107 ntBASIC0.79□□□□□ -2.28
TRIM43Q96BQ3 Y_RNA.549-201ENST00000384657 102 ntBASIC0.79□□□□□ -2.28
TRIM43Q96BQ3 RNU6-679P-201ENST00000391003 106 ntBASIC0.79□□□□□ -2.28
TRIM43Q96BQ3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.79□□□□□ -2.28
TRIM43Q96BQ3 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
TRIM43Q96BQ3 Y_RNA.32-201ENST00000362589 110 ntBASIC0.78□□□□□ -2.28
TRIM43Q96BQ3 RNU6-716P-201ENST00000365621 103 ntBASIC0.78□□□□□ -2.28
TRIM43Q96BQ3 AC068339.1-201ENST00000526965 141 ntBASIC0.78□□□□□ -2.28
TRIM43Q96BQ3 MTND5P40-201ENST00000559945 246 ntBASIC0.78□□□□□ -2.28
TRIM43Q96BQ3 U2.22-201ENST00000636441 106 ntBASIC0.78□□□□□ -2.28
TRIM43Q96BQ3 RNA5SP347-201ENST00000362445 119 ntBASIC0.77□□□□□ -2.29
TRIM43Q96BQ3 Y_RNA.35-201ENST00000362601 101 ntBASIC0.77□□□□□ -2.29
TRIM43Q96BQ3 MIR1197-201ENST00000408818 88 ntBASIC0.77□□□□□ -2.29
TRIM43Q96BQ3 AC098934.3-201ENST00000430450 190 ntBASIC0.77□□□□□ -2.29
TRIM43Q96BQ3 SNORA31.14-201ENST00000516728 116 ntBASIC0.77□□□□□ -2.29
TRIM43Q96BQ3 RNU6-135P-201ENST00000516769 101 ntBASIC0.77□□□□□ -2.29
TRIM43Q96BQ3 uc_338.16-201ENST00000621804 95 ntBASIC0.77□□□□□ -2.29
TRIM43Q96BQ3 Y_RNA.281-201ENST00000364774 94 ntBASIC0.76□□□□□ -2.29
TRIM43Q96BQ3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.76□□□□□ -2.29
TRIM43Q96BQ3 BX276092.1-201ENST00000427368 251 ntBASIC0.76□□□□□ -2.29
TRIM43Q96BQ3 SNORD38.1-201ENST00000363863 68 ntBASIC0.75□□□□□ -2.29
TRIM43Q96BQ3 U8.6-201ENST00000364939 135 ntBASIC0.75□□□□□ -2.29
TRIM43Q96BQ3 MIR635-201ENST00000384830 98 ntBASIC0.75□□□□□ -2.29
TRIM43Q96BQ3 MIR140-201ENST00000385282 100 ntBASIC0.75□□□□□ -2.29
TRIM43Q96BQ3 MIR548I2-201ENST00000408348 149 ntBASIC0.75□□□□□ -2.29
TRIM43Q96BQ3 AL353813.1-201ENST00000440700 253 ntBASIC0.75□□□□□ -2.29
TRIM43Q96BQ3 MIR3678-201ENST00000578455 94 ntBASIC0.75□□□□□ -2.29
TRIM43Q96BQ3 AC096720.1-201ENST00000604441 183 ntBASIC0.75□□□□□ -2.29
TRIM43Q96BQ3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.75□□□□□ -2.29
TRIM43Q96BQ3 RNA5SP499-201ENST00000363982 119 ntBASIC0.74□□□□□ -2.29
TRIM43Q96BQ3 RNU6-571P-201ENST00000384128 107 ntBASIC0.74□□□□□ -2.29
TRIM43Q96BQ3 RNU6-1201P-201ENST00000384227 107 ntBASIC0.74□□□□□ -2.29
TRIM43Q96BQ3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.74□□□□□ -2.29
TRIM43Q96BQ3 AL606490.4-201ENST00000423117 127 ntBASIC0.74□□□□□ -2.29
TRIM43Q96BQ3 SPINT5P-201ENST00000448174 155 ntBASIC0.74□□□□□ -2.29
TRIM43Q96BQ3 AC138869.1-201ENST00000568623 124 ntBASIC0.74□□□□□ -2.29
TRIM43Q96BQ3 MIR5009-201ENST00000578736 100 ntBASIC0.74□□□□□ -2.29
TRIM43Q96BQ3 AL442128.1-201ENST00000615151 90 ntBASIC0.74□□□□□ -2.29
TRIM43Q96BQ3 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.74□□□□□ -2.29
TRIM43Q96BQ3 AC243829.3-201ENST00000622177 108 ntBASIC0.74□□□□□ -2.29
TRIM43Q96BQ3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.74□□□□□ -2.29
TRIM43Q96BQ3 RNU6-1229P-201ENST00000364295 107 ntBASIC0.73□□□□□ -2.29
TRIM43Q96BQ3 Y_RNA.273-201ENST00000364703 102 ntBASIC0.73□□□□□ -2.29
TRIM43Q96BQ3 MIR644A-201ENST00000385262 94 ntBASIC0.73□□□□□ -2.29
TRIM43Q96BQ3 AC092628.1-201ENST00000436250 252 ntBASIC0.73□□□□□ -2.29
TRIM43Q96BQ3 MIR4694-201ENST00000578534 80 ntBASIC0.73□□□□□ -2.29
TRIM43Q96BQ3 MIR548AI-201ENST00000579940 88 ntBASIC0.73□□□□□ -2.29
TRIM43Q96BQ3 RNU6-1107P-201ENST00000364817 104 ntBASIC0.72□□□□□ -2.29
TRIM43Q96BQ3 RNY1P8-201ENST00000383970 114 ntBASIC0.72□□□□□ -2.29
TRIM43Q96BQ3 SNRPGP12-201ENST00000449481 213 ntBASIC0.72□□□□□ -2.29
TRIM43Q96BQ3 RNU6-90P-201ENST00000606352 106 ntBASIC0.72□□□□□ -2.29
TRIM43Q96BQ3 MIR6129-201ENST00000616087 109 ntBASIC0.72□□□□□ -2.29
TRIM43Q96BQ3 MIR2909-201ENST00000617113 69 ntBASIC0.72□□□□□ -2.29
TRIM43Q96BQ3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
TRIM43Q96BQ3 RNU6-170P-201ENST00000362832 104 ntBASIC0.71□□□□□ -2.3
TRIM43Q96BQ3 Y_RNA.323-201ENST00000365157 109 ntBASIC0.71□□□□□ -2.3
TRIM43Q96BQ3 Y_RNA.377-201ENST00000365644 108 ntBASIC0.71□□□□□ -2.3
TRIM43Q96BQ3 MIR548G-201ENST00000408442 89 ntBASIC0.71□□□□□ -2.3
TRIM43Q96BQ3 RNU6-1006P-201ENST00000516998 103 ntBASIC0.71□□□□□ -2.3
TRIM43Q96BQ3 RNY3P2-201ENST00000362918 102 ntBASIC0.7□□□□□ -2.3
TRIM43Q96BQ3 RNA5SP62-201ENST00000363457 110 ntBASIC0.7□□□□□ -2.3
TRIM43Q96BQ3 RNA5SP245-201ENST00000364239 121 ntBASIC0.7□□□□□ -2.3
TRIM43Q96BQ3 MIR577-201ENST00000385196 96 ntBASIC0.7□□□□□ -2.3
TRIM43Q96BQ3 RNA5SP395-201ENST00000516567 118 ntBASIC0.7□□□□□ -2.3
TRIM43Q96BQ3 RNU6-850P-201ENST00000516934 103 ntBASIC0.7□□□□□ -2.3
TRIM43Q96BQ3 RNU6-1014P-201ENST00000383940 103 ntBASIC0.69□□□□□ -2.3
TRIM43Q96BQ3 Y_RNA.567-201ENST00000384736 106 ntBASIC0.69□□□□□ -2.3
TRIM43Q96BQ3 Y_RNA.629-201ENST00000411368 105 ntBASIC0.69□□□□□ -2.3
TRIM43Q96BQ3 RNA5SP94-201ENST00000516917 108 ntBASIC0.69□□□□□ -2.3
TRIM43Q96BQ3 AC141557.1-201ENST00000540982 400 ntBASIC0.69□□□□□ -2.3
TRIM43Q96BQ3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
TRIM43Q96BQ3 RNU6-832P-201ENST00000363319 107 ntBASIC0.68□□□□□ -2.3
TRIM43Q96BQ3 SNORD18A-201ENST00000363753 72 ntBASIC0.68□□□□□ -2.3
TRIM43Q96BQ3 Y_RNA.247-201ENST00000364500 92 ntBASIC0.68□□□□□ -2.3
TRIM43Q96BQ3 Y_RNA.342-201ENST00000365352 113 ntBASIC0.68□□□□□ -2.3
TRIM43Q96BQ3 AC244505.6-201ENST00000452829 130 ntBASIC0.68□□□□□ -2.3
TRIM43Q96BQ3 TRAJ51-201ENST00000504127 63 ntBASIC0.68□□□□□ -2.3
TRIM43Q96BQ3 RNA5SP476-201ENST00000516613 103 ntBASIC0.68□□□□□ -2.3
TRIM43Q96BQ3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.68□□□□□ -2.3
TRIM43Q96BQ3 MIR4639-201ENST00000584938 69 ntBASIC0.68□□□□□ -2.3
TRIM43Q96BQ3 AC092634.7-201ENST00000621022 103 ntBASIC0.68□□□□□ -2.3
TRIM43Q96BQ3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
TRIM43Q96BQ3 SNORD63B-201ENST00000411005 70 ntBASIC0.67□□□□□ -2.3
TRIM43Q96BQ3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.67□□□□□ -2.3
TRIM43Q96BQ3 Y_RNA.659-201ENST00000515994 113 ntBASIC0.67□□□□□ -2.3
TRIM43Q96BQ3 RNU6-229P-201ENST00000516614 102 ntBASIC0.67□□□□□ -2.3
TRIM43Q96BQ3 Y_RNA.10-201ENST00000362371 110 ntBASIC0.66□□□□□ -2.3
TRIM43Q96BQ3 RNU4-36P-201ENST00000364294 144 ntBASIC0.66□□□□□ -2.3
TRIM43Q96BQ3 Y_RNA.291-201ENST00000364886 113 ntBASIC0.66□□□□□ -2.3
TRIM43Q96BQ3 AC097635.1-201ENST00000450678 155 ntBASIC0.66□□□□□ -2.3
TRIM43Q96BQ3 SNORD115-24-201ENST00000363528 82 ntBASIC0.65□□□□□ -2.31
TRIM43Q96BQ3 RNU6-1099P-201ENST00000363533 107 ntBASIC0.65□□□□□ -2.31
TRIM43Q96BQ3 RNU6-945P-201ENST00000383947 107 ntBASIC0.65□□□□□ -2.31
TRIM43Q96BQ3 MIR599-201ENST00000385069 95 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 304.7 ms