Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RNU7-106P-201ENST00000459514 67 ntBASIC1.43□□□□□ -2.18
BRF1Q92994 RNU6-977P-201ENST00000516411 103 ntBASIC1.43□□□□□ -2.18
BRF1Q92994 AP003327.1-201ENST00000529684 127 ntBASIC1.43□□□□□ -2.18
BRF1Q92994 MIR378A-201ENST00000362177 66 ntBASIC1.42□□□□□ -2.18
BRF1Q92994 Y_RNA.536-201ENST00000384621 113 ntBASIC1.42□□□□□ -2.18
BRF1Q92994 MIR150-201ENST00000385048 84 ntBASIC1.42□□□□□ -2.18
BRF1Q92994 RNU6-243P-201ENST00000391140 107 ntBASIC1.42□□□□□ -2.18
BRF1Q92994 AC067940.1-201ENST00000458411 300 ntBASIC1.42□□□□□ -2.18
BRF1Q92994 RNU7-102P-201ENST00000458948 62 ntBASIC1.42□□□□□ -2.18
BRF1Q92994 TRAJ51-201ENST00000504127 63 ntBASIC1.42□□□□□ -2.18
BRF1Q92994 RNU6-267P-201ENST00000516714 103 ntBASIC1.42□□□□□ -2.18
BRF1Q92994 AL359821.1-201ENST00000605519 182 ntBASIC1.42□□□□□ -2.18
BRF1Q92994 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.42□□□□□ -2.18
BRF1Q92994 AL353770.2-201ENST00000620024 78 ntBASIC1.42□□□□□ -2.18
BRF1Q92994 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
BRF1Q92994 MIR100-201ENST00000385259 80 ntBASIC1.41□□□□□ -2.18
BRF1Q92994 RNU6-519P-201ENST00000410590 108 ntBASIC1.41□□□□□ -2.18
BRF1Q92994 RNU6-237P-201ENST00000515985 71 ntBASIC1.41□□□□□ -2.18
BRF1Q92994 Y_RNA.697-201ENST00000516776 113 ntBASIC1.41□□□□□ -2.18
BRF1Q92994 RNU6-448P-201ENST00000517052 107 ntBASIC1.41□□□□□ -2.18
BRF1Q92994 MIR4769-201ENST00000584126 77 ntBASIC1.41□□□□□ -2.18
BRF1Q92994 AC092628.1-201ENST00000436250 252 ntBASIC1.4□□□□□ -2.19
BRF1Q92994 SNORD4B-201ENST00000459083 72 ntBASIC1.4□□□□□ -2.19
BRF1Q92994 AL157834.3-201ENST00000615543 103 ntBASIC1.4□□□□□ -2.19
BRF1Q92994 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
BRF1Q92994 RNU6-509P-201ENST00000363519 107 ntBASIC1.39□□□□□ -2.19
BRF1Q92994 RNU1-119P-201ENST00000391122 165 ntBASIC1.39□□□□□ -2.19
BRF1Q92994 FABP5P4-201ENST00000437203 171 ntBASIC1.39□□□□□ -2.19
BRF1Q92994 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
BRF1Q92994 RNA5SP173-201ENST00000364857 136 ntBASIC1.38□□□□□ -2.19
BRF1Q92994 MIR200A-201ENST00000384875 90 ntBASIC1.38□□□□□ -2.19
BRF1Q92994 RNU7-85P-201ENST00000458851 63 ntBASIC1.38□□□□□ -2.19
BRF1Q92994 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.38□□□□□ -2.19
BRF1Q92994 AC022137.1-201ENST00000483735 151 ntBASIC1.38□□□□□ -2.19
BRF1Q92994 RNU6-1110P-201ENST00000516462 101 ntBASIC1.38□□□□□ -2.19
BRF1Q92994 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.38□□□□□ -2.19
BRF1Q92994 AL136317.1-201ENST00000612653 226 ntBASIC1.38□□□□□ -2.19
BRF1Q92994 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.38□□□□□ -2.19
BRF1Q92994 RNU6-1260P-201ENST00000362944 107 ntBASIC1.37□□□□□ -2.19
BRF1Q92994 RNU6-979P-201ENST00000383896 107 ntBASIC1.37□□□□□ -2.19
BRF1Q92994 AC138907.6-201ENST00000568401 126 ntBASIC1.37□□□□□ -2.19
BRF1Q92994 AC138869.1-201ENST00000568623 124 ntBASIC1.37□□□□□ -2.19
BRF1Q92994 MIR5588-201ENST00000581890 63 ntBASIC1.37□□□□□ -2.19
BRF1Q92994 AC008608.1-201ENST00000603910 127 ntBASIC1.37□□□□□ -2.19
BRF1Q92994 RMST_2.1-201ENST00000617263 136 ntBASIC1.37□□□□□ -2.19
BRF1Q92994 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
BRF1Q92994 Y_RNA.4-201ENST00000362333 112 ntBASIC1.36□□□□□ -2.19
BRF1Q92994 Y_RNA.73-201ENST00000362910 113 ntBASIC1.36□□□□□ -2.19
BRF1Q92994 RNU1-124P-201ENST00000363861 145 ntBASIC1.36□□□□□ -2.19
BRF1Q92994 RNU6-291P-201ENST00000384720 107 ntBASIC1.36□□□□□ -2.19
BRF1Q92994 MIR520F-201ENST00000384824 87 ntBASIC1.36□□□□□ -2.19
BRF1Q92994 RNU6-592P-201ENST00000411333 103 ntBASIC1.36□□□□□ -2.19
BRF1Q92994 AC097635.1-201ENST00000450678 155 ntBASIC1.36□□□□□ -2.19
BRF1Q92994 RNU7-195P-201ENST00000458793 62 ntBASIC1.36□□□□□ -2.19
BRF1Q92994 U7.7-201ENST00000459276 60 ntBASIC1.36□□□□□ -2.19
BRF1Q92994 RNU6-535P-201ENST00000384722 107 ntBASIC1.35□□□□□ -2.19
BRF1Q92994 snoU13.11-201ENST00000459219 104 ntBASIC1.35□□□□□ -2.19
BRF1Q92994 Y_RNA.809-201ENST00000516058 95 ntBASIC1.35□□□□□ -2.19
BRF1Q92994 MIR548BB-201ENST00000626714 66 ntBASIC1.35□□□□□ -2.19
BRF1Q92994 Y_RNA.283-201ENST00000364798 112 ntBASIC1.34□□□□□ -2.19
BRF1Q92994 RNU6-242P-201ENST00000384359 107 ntBASIC1.34□□□□□ -2.19
BRF1Q92994 MIR519C-201ENST00000385053 87 ntBASIC1.34□□□□□ -2.19
BRF1Q92994 Y_RNA.191-201ENST00000363972 113 ntBASIC1.33□□□□□ -2.2
BRF1Q92994 SNORD115-27-201ENST00000364430 82 ntBASIC1.33□□□□□ -2.2
BRF1Q92994 RNU6-1276P-201ENST00000365372 104 ntBASIC1.33□□□□□ -2.2
BRF1Q92994 RNU6-573P-201ENST00000383938 106 ntBASIC1.33□□□□□ -2.2
BRF1Q92994 RNU6-466P-201ENST00000391224 103 ntBASIC1.33□□□□□ -2.2
BRF1Q92994 MIR1285-1-201ENST00000408593 84 ntBASIC1.33□□□□□ -2.2
BRF1Q92994 RNU7-171P-201ENST00000459581 62 ntBASIC1.33□□□□□ -2.2
BRF1Q92994 RNA5SP458-201ENST00000516188 119 ntBASIC1.33□□□□□ -2.2
BRF1Q92994 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.33□□□□□ -2.2
BRF1Q92994 AC019288.1-201ENST00000557918 224 ntBASIC1.33□□□□□ -2.2
BRF1Q92994 MIR4536-1-201ENST00000583537 88 ntBASIC1.33□□□□□ -2.2
BRF1Q92994 SNORA25.8-201ENST00000364831 128 ntBASIC1.32□□□□□ -2.2
BRF1Q92994 Y_RNA.426-201ENST00000384068 113 ntBASIC1.32□□□□□ -2.2
BRF1Q92994 AC244505.6-201ENST00000452829 130 ntBASIC1.32□□□□□ -2.2
BRF1Q92994 RNU6-75P-201ENST00000515944 104 ntBASIC1.32□□□□□ -2.2
BRF1Q92994 RNA5SP404-201ENST00000517118 132 ntBASIC1.32□□□□□ -2.2
BRF1Q92994 AC006160.2-201ENST00000637708 154 ntBASIC1.32□□□□□ -2.2
BRF1Q92994 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.32□□□□□ -2.2
BRF1Q92994 RNA5SP432-201ENST00000362480 116 ntBASIC1.31□□□□□ -2.2
BRF1Q92994 Y_RNA.174-201ENST00000363781 105 ntBASIC1.31□□□□□ -2.2
BRF1Q92994 Y_RNA.219-201ENST00000364232 113 ntBASIC1.31□□□□□ -2.2
BRF1Q92994 RNA5SP245-201ENST00000364239 121 ntBASIC1.31□□□□□ -2.2
BRF1Q92994 MIR618-201ENST00000385287 98 ntBASIC1.31□□□□□ -2.2
BRF1Q92994 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
BRF1Q92994 MIR1236-201ENST00000408340 102 ntBASIC1.31□□□□□ -2.2
BRF1Q92994 Y_RNA.611-201ENST00000410682 108 ntBASIC1.31□□□□□ -2.2
BRF1Q92994 RNU6-65P-201ENST00000516332 98 ntBASIC1.31□□□□□ -2.2
BRF1Q92994 uc_338.16-201ENST00000621804 95 ntBASIC1.31□□□□□ -2.2
BRF1Q92994 RNU6-957P-201ENST00000363652 99 ntBASIC1.3□□□□□ -2.2
BRF1Q92994 SNORD114-24-201ENST00000365029 72 ntBASIC1.3□□□□□ -2.2
BRF1Q92994 SNORD89-201ENST00000390981 114 ntBASIC1.3□□□□□ -2.2
BRF1Q92994 SNORD124-201ENST00000459577 104 ntBASIC1.3□□□□□ -2.2
BRF1Q92994 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
BRF1Q92994 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
BRF1Q92994 MIR26B-201ENST00000362251 77 ntBASIC1.29□□□□□ -2.2
BRF1Q92994 MIR599-201ENST00000385069 95 ntBASIC1.29□□□□□ -2.2
BRF1Q92994 MIR520H-201ENST00000385126 88 ntBASIC1.29□□□□□ -2.2
BRF1Q92994 MIR6078-201ENST00000611069 100 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms