Protein–RNA interactions for Protein: Q8TDD1

DDX54, ATP-dependent RNA helicase DDX54, humanhuman

Known RBP Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54Q8TDD1 RNU7-185P-201ENST00000459215 60 ntBASIC1.86□□□□□ -2.11
DDX54Q8TDD1 SNORA31.2-201ENST00000516019 134 ntBASIC1.86□□□□□ -2.11
DDX54Q8TDD1 MIR6078-201ENST00000611069 100 ntBASIC1.86□□□□□ -2.11
DDX54Q8TDD1 MIR6734-201ENST00000621166 68 ntBASIC1.86□□□□□ -2.11
DDX54Q8TDD1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
DDX54Q8TDD1 Y_RNA.607-201ENST00000410597 98 ntBASIC1.85□□□□□ -2.11
DDX54Q8TDD1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.85□□□□□ -2.11
DDX54Q8TDD1 RNU6-857P-201ENST00000515893 110 ntBASIC1.85□□□□□ -2.11
DDX54Q8TDD1 AC036111.3-201ENST00000526389 112 ntBASIC1.85□□□□□ -2.11
DDX54Q8TDD1 Y_RNA.13-201ENST00000362403 112 ntBASIC1.84□□□□□ -2.11
DDX54Q8TDD1 SNORD33-201ENST00000362761 85 ntBASIC1.84□□□□□ -2.11
DDX54Q8TDD1 SNORD36A-201ENST00000362874 73 ntBASIC1.84□□□□□ -2.11
DDX54Q8TDD1 RNU4-58P-201ENST00000363192 141 ntBASIC1.84□□□□□ -2.11
DDX54Q8TDD1 RNU6-279P-201ENST00000391297 101 ntBASIC1.84□□□□□ -2.11
DDX54Q8TDD1 AC093729.1-201ENST00000513074 128 ntBASIC1.84□□□□□ -2.11
DDX54Q8TDD1 RNA5SP220-201ENST00000516298 104 ntBASIC1.84□□□□□ -2.11
DDX54Q8TDD1 RNU6-934P-201ENST00000365154 107 ntBASIC1.83□□□□□ -2.12
DDX54Q8TDD1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.83□□□□□ -2.12
DDX54Q8TDD1 MIR3122-201ENST00000577243 73 ntBASIC1.83□□□□□ -2.12
DDX54Q8TDD1 MIR4771-2-201ENST00000577758 74 ntBASIC1.83□□□□□ -2.12
DDX54Q8TDD1 MIR4771-1-201ENST00000582617 74 ntBASIC1.83□□□□□ -2.12
DDX54Q8TDD1 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
DDX54Q8TDD1 MIR1257-201ENST00000408490 117 ntBASIC1.82□□□□□ -2.12
DDX54Q8TDD1 SNORD100-201ENST00000408573 76 ntBASIC1.82□□□□□ -2.12
DDX54Q8TDD1 SNORD63B-201ENST00000411005 70 ntBASIC1.82□□□□□ -2.12
DDX54Q8TDD1 Y_RNA.648-201ENST00000459455 110 ntBASIC1.82□□□□□ -2.12
DDX54Q8TDD1 Y_RNA.221-201ENST00000364248 96 ntBASIC1.81□□□□□ -2.12
DDX54Q8TDD1 SNORD113.3-201ENST00000364630 78 ntBASIC1.81□□□□□ -2.12
DDX54Q8TDD1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
DDX54Q8TDD1 RNU1-78P-201ENST00000391248 165 ntBASIC1.81□□□□□ -2.12
DDX54Q8TDD1 RNU6-1254P-201ENST00000391266 104 ntBASIC1.81□□□□□ -2.12
DDX54Q8TDD1 TRAJ51-201ENST00000504127 63 ntBASIC1.81□□□□□ -2.12
DDX54Q8TDD1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
DDX54Q8TDD1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
DDX54Q8TDD1 Y_RNA.94-201ENST00000363068 106 ntBASIC1.8□□□□□ -2.12
DDX54Q8TDD1 MIR320A-201ENST00000385302 82 ntBASIC1.8□□□□□ -2.12
DDX54Q8TDD1 RNU6-243P-201ENST00000391140 107 ntBASIC1.8□□□□□ -2.12
DDX54Q8TDD1 RNU7-40P-201ENST00000516397 64 ntBASIC1.8□□□□□ -2.12
DDX54Q8TDD1 AC140658.3-201ENST00000567603 271 ntBASIC1.8□□□□□ -2.12
DDX54Q8TDD1 MIR3198-2-201ENST00000577868 80 ntBASIC1.8□□□□□ -2.12
DDX54Q8TDD1 MIR6082-201ENST00000613604 109 ntBASIC1.8□□□□□ -2.12
DDX54Q8TDD1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.79□□□□□ -2.12
DDX54Q8TDD1 SNORD115-37-201ENST00000363768 82 ntBASIC1.79□□□□□ -2.12
DDX54Q8TDD1 RNU6-910P-201ENST00000390844 107 ntBASIC1.79□□□□□ -2.12
DDX54Q8TDD1 RNA5SP292-201ENST00000390974 118 ntBASIC1.79□□□□□ -2.12
DDX54Q8TDD1 RNU7-195P-201ENST00000458793 62 ntBASIC1.79□□□□□ -2.12
DDX54Q8TDD1 MIR101-2-201ENST00000362195 79 ntBASIC1.78□□□□□ -2.12
DDX54Q8TDD1 RNU6-957P-201ENST00000363652 99 ntBASIC1.78□□□□□ -2.12
DDX54Q8TDD1 SNORD114-27-201ENST00000363766 70 ntBASIC1.78□□□□□ -2.12
DDX54Q8TDD1 RNU6-132P-201ENST00000383863 107 ntBASIC1.78□□□□□ -2.12
DDX54Q8TDD1 Y_RNA.536-201ENST00000384621 113 ntBASIC1.78□□□□□ -2.12
DDX54Q8TDD1 MIR1236-201ENST00000408340 102 ntBASIC1.78□□□□□ -2.12
DDX54Q8TDD1 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.78□□□□□ -2.12
DDX54Q8TDD1 AC008834.1-201ENST00000511612 175 ntBASIC1.78□□□□□ -2.12
DDX54Q8TDD1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.78□□□□□ -2.12
DDX54Q8TDD1 SNORA25.13-201ENST00000516395 103 ntBASIC1.78□□□□□ -2.12
DDX54Q8TDD1 MIR4536-1-201ENST00000583537 88 ntBASIC1.78□□□□□ -2.12
DDX54Q8TDD1 RNU6-75P-201ENST00000515944 104 ntBASIC1.77□□□□□ -2.13
DDX54Q8TDD1 RNU6-1194P-201ENST00000516208 104 ntBASIC1.77□□□□□ -2.13
DDX54Q8TDD1 Y_RNA.283-201ENST00000364798 112 ntBASIC1.76□□□□□ -2.13
DDX54Q8TDD1 RNU6-24P-201ENST00000384440 107 ntBASIC1.76□□□□□ -2.13
DDX54Q8TDD1 MIR125B2-201ENST00000385128 89 ntBASIC1.76□□□□□ -2.13
DDX54Q8TDD1 MIR889-201ENST00000401280 79 ntBASIC1.76□□□□□ -2.13
DDX54Q8TDD1 AL606490.4-201ENST00000423117 127 ntBASIC1.76□□□□□ -2.13
DDX54Q8TDD1 AL450471.1-201ENST00000447509 127 ntBASIC1.76□□□□□ -2.13
DDX54Q8TDD1 AC004223.1-201ENST00000479840 271 ntBASIC1.76□□□□□ -2.13
DDX54Q8TDD1 RNU6-65P-201ENST00000516332 98 ntBASIC1.76□□□□□ -2.13
DDX54Q8TDD1 RNA5SP61-201ENST00000516453 100 ntBASIC1.76□□□□□ -2.13
DDX54Q8TDD1 MIRLET7F1-201ENST00000362202 87 ntBASIC1.75□□□□□ -2.13
DDX54Q8TDD1 MIR635-201ENST00000384830 98 ntBASIC1.75□□□□□ -2.13
DDX54Q8TDD1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.75□□□□□ -2.13
DDX54Q8TDD1 RNU7-21P-201ENST00000459430 62 ntBASIC1.75□□□□□ -2.13
DDX54Q8TDD1 RNU6-902P-201ENST00000517212 91 ntBASIC1.75□□□□□ -2.13
DDX54Q8TDD1 RNU7-156P-201ENST00000517214 74 ntBASIC1.75□□□□□ -2.13
DDX54Q8TDD1 MIR4422-201ENST00000581938 83 ntBASIC1.75□□□□□ -2.13
DDX54Q8TDD1 MIR4712-201ENST00000583750 82 ntBASIC1.75□□□□□ -2.13
DDX54Q8TDD1 AC106800.4-201ENST00000614905 153 ntBASIC1.75□□□□□ -2.13
DDX54Q8TDD1 RNU1-93P-201ENST00000364704 169 ntBASIC1.74□□□□□ -2.13
DDX54Q8TDD1 Y_RNA.540-201ENST00000384638 111 ntBASIC1.74□□□□□ -2.13
DDX54Q8TDD1 MIR520E-201ENST00000384867 87 ntBASIC1.74□□□□□ -2.13
DDX54Q8TDD1 RPS26P5-201ENST00000418544 335 ntBASIC1.74□□□□□ -2.13
DDX54Q8TDD1 AC092628.1-201ENST00000436250 252 ntBASIC1.74□□□□□ -2.13
DDX54Q8TDD1 MIR4676-201ENST00000583078 72 ntBASIC1.74□□□□□ -2.13
DDX54Q8TDD1 Y_RNA.42-201ENST00000362660 108 ntBASIC1.73□□□□□ -2.13
DDX54Q8TDD1 RNU6-478P-201ENST00000363904 110 ntBASIC1.73□□□□□ -2.13
DDX54Q8TDD1 RNU6-811P-201ENST00000384069 107 ntBASIC1.73□□□□□ -2.13
DDX54Q8TDD1 AL591704.2-201ENST00000421658 181 ntBASIC1.73□□□□□ -2.13
DDX54Q8TDD1 SNORA18.5-201ENST00000516616 101 ntBASIC1.73□□□□□ -2.13
DDX54Q8TDD1 Y_RNA.697-201ENST00000516776 113 ntBASIC1.73□□□□□ -2.13
DDX54Q8TDD1 MIR4796-201ENST00000580742 81 ntBASIC1.73□□□□□ -2.13
DDX54Q8TDD1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
DDX54Q8TDD1 RNU6-369P-201ENST00000362515 102 ntBASIC1.72□□□□□ -2.13
DDX54Q8TDD1 RNA5SP245-201ENST00000364239 121 ntBASIC1.72□□□□□ -2.13
DDX54Q8TDD1 SNORA40.6-201ENST00000391153 128 ntBASIC1.72□□□□□ -2.13
DDX54Q8TDD1 RNU6-466P-201ENST00000391224 103 ntBASIC1.72□□□□□ -2.13
DDX54Q8TDD1 SNORD111-201ENST00000408139 94 ntBASIC1.72□□□□□ -2.13
DDX54Q8TDD1 MIR3660-201ENST00000584845 100 ntBASIC1.72□□□□□ -2.13
DDX54Q8TDD1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.72□□□□□ -2.13
DDX54Q8TDD1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
DDX54Q8TDD1 SNORD90-201ENST00000391145 111 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms