Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 SNORA25.5-201ENST00000363782 126 ntBASIC2.61□□□□□ -1.99
NKX2-3Q8TAU0 RNU6-382P-201ENST00000365181 106 ntBASIC2.61□□□□□ -1.99
NKX2-3Q8TAU0 Y_RNA.697-201ENST00000516776 113 ntBASIC2.61□□□□□ -1.99
NKX2-3Q8TAU0 RNU6-765P-201ENST00000516916 99 ntBASIC2.61□□□□□ -1.99
NKX2-3Q8TAU0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.61□□□□□ -1.99
NKX2-3Q8TAU0 RNU6-668P-201ENST00000364180 107 ntBASIC2.6□□□□□ -1.99
NKX2-3Q8TAU0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.6□□□□□ -1.99
NKX2-3Q8TAU0 AC138907.6-201ENST00000568401 126 ntBASIC2.6□□□□□ -1.99
NKX2-3Q8TAU0 AC138869.1-201ENST00000568623 124 ntBASIC2.6□□□□□ -1.99
NKX2-3Q8TAU0 MIR466-201ENST00000580653 84 ntBASIC2.6□□□□□ -1.99
NKX2-3Q8TAU0 MIR6082-201ENST00000613604 109 ntBASIC2.6□□□□□ -1.99
NKX2-3Q8TAU0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NKX2-3Q8TAU0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.59□□□□□ -1.99
NKX2-3Q8TAU0 RNU6-1335P-201ENST00000365426 107 ntBASIC2.59□□□□□ -1.99
NKX2-3Q8TAU0 AC055731.1-201ENST00000474387 401 ntBASIC2.59□□□□□ -1.99
NKX2-3Q8TAU0 AL133373.1-201ENST00000497098 94 ntBASIC2.59□□□□□ -1.99
NKX2-3Q8TAU0 RNU6-982P-201ENST00000516216 102 ntBASIC2.59□□□□□ -1.99
NKX2-3Q8TAU0 SNORA31.11-201ENST00000516528 139 ntBASIC2.59□□□□□ -1.99
NKX2-3Q8TAU0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
NKX2-3Q8TAU0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
NKX2-3Q8TAU0 RNU1-17P-201ENST00000363022 152 ntBASIC2.58□□□□□ -2
NKX2-3Q8TAU0 Y_RNA.258-201ENST00000364613 105 ntBASIC2.58□□□□□ -2
NKX2-3Q8TAU0 RNA5SP259-201ENST00000365541 109 ntBASIC2.58□□□□□ -2
NKX2-3Q8TAU0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NKX2-3Q8TAU0 MIR513A1-201ENST00000385138 129 ntBASIC2.58□□□□□ -2
NKX2-3Q8TAU0 SNORD23.1-201ENST00000408212 104 ntBASIC2.58□□□□□ -2
NKX2-3Q8TAU0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.58□□□□□ -2
NKX2-3Q8TAU0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.58□□□□□ -2
NKX2-3Q8TAU0 RNU6-250P-201ENST00000516958 103 ntBASIC2.58□□□□□ -2
NKX2-3Q8TAU0 RNU6-1057P-201ENST00000517162 102 ntBASIC2.58□□□□□ -2
NKX2-3Q8TAU0 GHRLOS.1-201ENST00000610995 70 ntBASIC2.58□□□□□ -2
NKX2-3Q8TAU0 AC131280.1-202ENST00000624067 4211 ntBASIC2.57□□□□□ -2
NKX2-3Q8TAU0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
NKX2-3Q8TAU0 SNORA67.1-201ENST00000364749 141 ntBASIC2.57□□□□□ -2
NKX2-3Q8TAU0 MIR599-201ENST00000385069 95 ntBASIC2.57□□□□□ -2
NKX2-3Q8TAU0 RNU7-24P-201ENST00000458867 62 ntBASIC2.57□□□□□ -2
NKX2-3Q8TAU0 snoU13.25-201ENST00000458945 104 ntBASIC2.57□□□□□ -2
NKX2-3Q8TAU0 RNU6-922P-201ENST00000516753 99 ntBASIC2.57□□□□□ -2
NKX2-3Q8TAU0 AL078603.1-201ENST00000603824 313 ntBASIC2.57□□□□□ -2
NKX2-3Q8TAU0 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.57□□□□□ -2
NKX2-3Q8TAU0 MIR7978-201ENST00000636158 59 ntBASIC2.57□□□□□ -2
NKX2-3Q8TAU0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
NKX2-3Q8TAU0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NKX2-3Q8TAU0 RNU6-446P-201ENST00000362827 106 ntBASIC2.56□□□□□ -2
NKX2-3Q8TAU0 RNA5SP212-201ENST00000391223 107 ntBASIC2.56□□□□□ -2
NKX2-3Q8TAU0 RNU7-185P-201ENST00000459215 60 ntBASIC2.56□□□□□ -2
NKX2-3Q8TAU0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.56□□□□□ -2
NKX2-3Q8TAU0 MIR4446-201ENST00000578505 67 ntBASIC2.56□□□□□ -2
NKX2-3Q8TAU0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NKX2-3Q8TAU0 Y_RNA.13-201ENST00000362403 112 ntBASIC2.55□□□□□ -2
NKX2-3Q8TAU0 RNA5SP192-201ENST00000364404 120 ntBASIC2.55□□□□□ -2
NKX2-3Q8TAU0 MIR1185-1-201ENST00000408598 86 ntBASIC2.55□□□□□ -2
NKX2-3Q8TAU0 snoU13.31-201ENST00000607291 104 ntBASIC2.55□□□□□ -2
NKX2-3Q8TAU0 AC103810.8-201ENST00000607347 118 ntBASIC2.55□□□□□ -2
NKX2-3Q8TAU0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
NKX2-3Q8TAU0 Y_RNA.355-201ENST00000365462 98 ntBASIC2.54□□□□□ -2
NKX2-3Q8TAU0 SNORD75.2-201ENST00000408784 58 ntBASIC2.54□□□□□ -2
NKX2-3Q8TAU0 MIR5194-201ENST00000582634 120 ntBASIC2.54□□□□□ -2
NKX2-3Q8TAU0 MIR6132-201ENST00000622083 109 ntBASIC2.54□□□□□ -2
NKX2-3Q8TAU0 AC073869.9-201ENST00000641610 120 ntBASIC2.54□□□□□ -2
NKX2-3Q8TAU0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NKX2-3Q8TAU0 RNA5SP393-201ENST00000363423 117 ntBASIC2.53□□□□□ -2
NKX2-3Q8TAU0 RNA5SP117-201ENST00000365294 118 ntBASIC2.53□□□□□ -2
NKX2-3Q8TAU0 AC104435.1-201ENST00000483483 166 ntBASIC2.53□□□□□ -2
NKX2-3Q8TAU0 SCARNA21.1-201ENST00000515996 128 ntBASIC2.53□□□□□ -2
NKX2-3Q8TAU0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.53□□□□□ -2
NKX2-3Q8TAU0 ZNF355P-201ENST00000427301 3216 ntBASIC2.52□□□□□ -2.01
NKX2-3Q8TAU0 SNORD115-44-201ENST00000365391 82 ntBASIC2.52□□□□□ -2.01
NKX2-3Q8TAU0 MIR1257-201ENST00000408490 117 ntBASIC2.52□□□□□ -2.01
NKX2-3Q8TAU0 JTBP1-201ENST00000441314 247 ntBASIC2.52□□□□□ -2.01
NKX2-3Q8TAU0 AC023934.1-201ENST00000574529 2389 ntBASIC2.52□□□□□ -2.01
NKX2-3Q8TAU0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NKX2-3Q8TAU0 AL596028.1-201ENST00000326971 197 ntBASIC2.51□□□□□ -2.01
NKX2-3Q8TAU0 RNA5SP264-201ENST00000363115 107 ntBASIC2.51□□□□□ -2.01
NKX2-3Q8TAU0 RNU6-1184P-201ENST00000384588 108 ntBASIC2.51□□□□□ -2.01
NKX2-3Q8TAU0 MIR499A-201ENST00000384903 122 ntBASIC2.51□□□□□ -2.01
NKX2-3Q8TAU0 RNA5SP200-201ENST00000516360 103 ntBASIC2.51□□□□□ -2.01
NKX2-3Q8TAU0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.51□□□□□ -2.01
NKX2-3Q8TAU0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.51□□□□□ -2.01
NKX2-3Q8TAU0 MIR583-201ENST00000384846 75 ntBASIC2.5□□□□□ -2.01
NKX2-3Q8TAU0 AC108667.1-201ENST00000428618 249 ntBASIC2.5□□□□□ -2.01
NKX2-3Q8TAU0 RNU6-287P-201ENST00000516230 98 ntBASIC2.5□□□□□ -2.01
NKX2-3Q8TAU0 MIR6845-201ENST00000613182 61 ntBASIC2.5□□□□□ -2.01
NKX2-3Q8TAU0 MIR103A2-201ENST00000362154 78 ntBASIC2.49□□□□□ -2.01
NKX2-3Q8TAU0 RNU6-495P-201ENST00000362995 107 ntBASIC2.49□□□□□ -2.01
NKX2-3Q8TAU0 RNU6-1039P-201ENST00000383931 107 ntBASIC2.49□□□□□ -2.01
NKX2-3Q8TAU0 RNU6-936P-201ENST00000384005 107 ntBASIC2.49□□□□□ -2.01
NKX2-3Q8TAU0 MIR216B-201ENST00000390186 82 ntBASIC2.49□□□□□ -2.01
NKX2-3Q8TAU0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.49□□□□□ -2.01
NKX2-3Q8TAU0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
NKX2-3Q8TAU0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
NKX2-3Q8TAU0 MIR3938-201ENST00000582157 103 ntBASIC2.48□□□□□ -2.01
NKX2-3Q8TAU0 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.48□□□□□ -2.01
NKX2-3Q8TAU0 Y_RNA.783-201ENST00000613546 102 ntBASIC2.48□□□□□ -2.01
NKX2-3Q8TAU0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NKX2-3Q8TAU0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NKX2-3Q8TAU0 RNU6-369P-201ENST00000362515 102 ntBASIC2.47□□□□□ -2.01
NKX2-3Q8TAU0 RNA5SP95-201ENST00000410319 137 ntBASIC2.47□□□□□ -2.01
NKX2-3Q8TAU0 RNA5SP182-201ENST00000516064 82 ntBASIC2.47□□□□□ -2.01
NKX2-3Q8TAU0 RNA5SP82-201ENST00000516707 92 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 274.2 ms