Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.18□□□□□ -2.6
CCDC112Q8NEF3 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.18□□□□□ -2.6
CCDC112Q8NEF3 MTND5P18-201ENST00000445624 1801 ntBASIC-1.18□□□□□ -2.6
CCDC112Q8NEF3 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.19□□□□□ -2.6
CCDC112Q8NEF3 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.19□□□□□ -2.6
CCDC112Q8NEF3 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.19□□□□□ -2.6
CCDC112Q8NEF3 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.19□□□□□ -2.6
CCDC112Q8NEF3 AL161932.1-201ENST00000437408 146 ntBASIC-1.19□□□□□ -2.6
CCDC112Q8NEF3 RNU6-875P-201ENST00000516488 106 ntBASIC-1.19□□□□□ -2.6
CCDC112Q8NEF3 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.19□□□□□ -2.6
CCDC112Q8NEF3 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.19□□□□□ -2.6
CCDC112Q8NEF3 MIR3179-1-201ENST00000578940 84 ntBASIC-1.19□□□□□ -2.6
CCDC112Q8NEF3 MIR3179-2-201ENST00000579107 84 ntBASIC-1.19□□□□□ -2.6
CCDC112Q8NEF3 MIR3179-3-201ENST00000579566 84 ntBASIC-1.19□□□□□ -2.6
CCDC112Q8NEF3 MIR3179-4-201ENST00000617599 84 ntBASIC-1.19□□□□□ -2.6
CCDC112Q8NEF3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.19□□□□□ -2.6
CCDC112Q8NEF3 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.2□□□□□ -2.6
CCDC112Q8NEF3 Y_RNA.237-201ENST00000364439 102 ntBASIC-1.2□□□□□ -2.6
CCDC112Q8NEF3 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.2□□□□□ -2.6
CCDC112Q8NEF3 RNU6-973P-201ENST00000364690 107 ntBASIC-1.2□□□□□ -2.6
CCDC112Q8NEF3 MIR587-201ENST00000384845 96 ntBASIC-1.2□□□□□ -2.6
CCDC112Q8NEF3 SNORD83B-201ENST00000386745 93 ntBASIC-1.2□□□□□ -2.6
CCDC112Q8NEF3 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.2□□□□□ -2.6
CCDC112Q8NEF3 RBMX2P4-201ENST00000441256 376 ntBASIC-1.2□□□□□ -2.6
CCDC112Q8NEF3 SPINT5P-201ENST00000448174 155 ntBASIC-1.2□□□□□ -2.6
CCDC112Q8NEF3 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.2□□□□□ -2.6
CCDC112Q8NEF3 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.2□□□□□ -2.6
CCDC112Q8NEF3 AC139792.2-201ENST00000624218 587 ntBASIC-1.2□□□□□ -2.6
CCDC112Q8NEF3 SNORD36A-201ENST00000362874 73 ntBASIC-1.21□□□□□ -2.6
CCDC112Q8NEF3 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.21□□□□□ -2.6
CCDC112Q8NEF3 SNX3P1X-201ENST00000414887 175 ntBASIC-1.21□□□□□ -2.6
CCDC112Q8NEF3 SCARNA17-201ENST00000516183 144 ntBASIC-1.21□□□□□ -2.6
CCDC112Q8NEF3 AC113195.1-201ENST00000579952 141 ntBASIC-1.21□□□□□ -2.6
CCDC112Q8NEF3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.21□□□□□ -2.6
CCDC112Q8NEF3 RNU4-40P-201ENST00000364351 143 ntBASIC-1.22□□□□□ -2.6
CCDC112Q8NEF3 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.22□□□□□ -2.6
CCDC112Q8NEF3 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.22□□□□□ -2.6
CCDC112Q8NEF3 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
CCDC112Q8NEF3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.22□□□□□ -2.6
CCDC112Q8NEF3 SNORD22.1-201ENST00000516331 125 ntBASIC-1.22□□□□□ -2.6
CCDC112Q8NEF3 SNORD27-201ENST00000363981 72 ntBASIC-1.23□□□□□ -2.61
CCDC112Q8NEF3 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.23□□□□□ -2.61
CCDC112Q8NEF3 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.23□□□□□ -2.61
CCDC112Q8NEF3 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.23□□□□□ -2.61
CCDC112Q8NEF3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.23□□□□□ -2.61
CCDC112Q8NEF3 MIR548O2-201ENST00000616090 70 ntBASIC-1.23□□□□□ -2.61
CCDC112Q8NEF3 RNU4-32P-201ENST00000363404 141 ntBASIC-1.24□□□□□ -2.61
CCDC112Q8NEF3 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.24□□□□□ -2.61
CCDC112Q8NEF3 RNU6-476P-201ENST00000384726 107 ntBASIC-1.24□□□□□ -2.61
CCDC112Q8NEF3 RNU6-243P-201ENST00000391140 107 ntBASIC-1.24□□□□□ -2.61
CCDC112Q8NEF3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.24□□□□□ -2.61
CCDC112Q8NEF3 SNORD2-201ENST00000459163 69 ntBASIC-1.24□□□□□ -2.61
CCDC112Q8NEF3 MIR4643-201ENST00000577473 78 ntBASIC-1.24□□□□□ -2.61
CCDC112Q8NEF3 MIR5704-201ENST00000584029 77 ntBASIC-1.24□□□□□ -2.61
CCDC112Q8NEF3 SNORD114-25-201ENST00000363742 72 ntBASIC-1.25□□□□□ -2.61
CCDC112Q8NEF3 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.25□□□□□ -2.61
CCDC112Q8NEF3 MTATP6P21-201ENST00000440681 189 ntBASIC-1.25□□□□□ -2.61
CCDC112Q8NEF3 RNY3P16-201ENST00000516338 101 ntBASIC-1.25□□□□□ -2.61
CCDC112Q8NEF3 MIR4795-201ENST00000584182 89 ntBASIC-1.25□□□□□ -2.61
CCDC112Q8NEF3 MIR335-201ENST00000362173 94 ntBASIC-1.26□□□□□ -2.61
CCDC112Q8NEF3 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.26□□□□□ -2.61
CCDC112Q8NEF3 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.26□□□□□ -2.61
CCDC112Q8NEF3 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.26□□□□□ -2.61
CCDC112Q8NEF3 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.26□□□□□ -2.61
CCDC112Q8NEF3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.26□□□□□ -2.61
CCDC112Q8NEF3 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.27□□□□□ -2.61
CCDC112Q8NEF3 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.27□□□□□ -2.61
CCDC112Q8NEF3 RNU6-957P-201ENST00000363652 99 ntBASIC-1.27□□□□□ -2.61
CCDC112Q8NEF3 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.27□□□□□ -2.61
CCDC112Q8NEF3 SNORD74.6-201ENST00000364796 70 ntBASIC-1.27□□□□□ -2.61
CCDC112Q8NEF3 MIR582-201ENST00000365731 98 ntBASIC-1.27□□□□□ -2.61
CCDC112Q8NEF3 SNORD38.2-201ENST00000384470 69 ntBASIC-1.27□□□□□ -2.61
CCDC112Q8NEF3 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.27□□□□□ -2.61
CCDC112Q8NEF3 AC022137.1-201ENST00000483735 151 ntBASIC-1.27□□□□□ -2.61
CCDC112Q8NEF3 MTND3P22-201ENST00000510932 243 ntBASIC-1.27□□□□□ -2.61
CCDC112Q8NEF3 RNU6-988P-201ENST00000519081 107 ntBASIC-1.27□□□□□ -2.61
CCDC112Q8NEF3 MIR6854-201ENST00000614935 69 ntBASIC-1.27□□□□□ -2.61
CCDC112Q8NEF3 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.28□□□□□ -2.61
CCDC112Q8NEF3 RNU6-474P-201ENST00000384243 107 ntBASIC-1.28□□□□□ -2.61
CCDC112Q8NEF3 RNU6-768P-201ENST00000384683 107 ntBASIC-1.28□□□□□ -2.61
CCDC112Q8NEF3 MIR517B-201ENST00000385102 67 ntBASIC-1.28□□□□□ -2.61
CCDC112Q8NEF3 MIR216B-201ENST00000390186 82 ntBASIC-1.28□□□□□ -2.61
CCDC112Q8NEF3 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.28□□□□□ -2.61
CCDC112Q8NEF3 MIR548E-201ENST00000408287 88 ntBASIC-1.28□□□□□ -2.61
CCDC112Q8NEF3 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.28□□□□□ -2.61
CCDC112Q8NEF3 MIR8068-201ENST00000618032 68 ntBASIC-1.28□□□□□ -2.61
CCDC112Q8NEF3 MIR6738-201ENST00000619620 64 ntBASIC-1.28□□□□□ -2.61
CCDC112Q8NEF3 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.29□□□□□ -2.62
CCDC112Q8NEF3 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.29□□□□□ -2.62
CCDC112Q8NEF3 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.29□□□□□ -2.62
CCDC112Q8NEF3 RNU6-275P-201ENST00000364910 107 ntBASIC-1.29□□□□□ -2.62
CCDC112Q8NEF3 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.29□□□□□ -2.62
CCDC112Q8NEF3 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.29□□□□□ -2.62
CCDC112Q8NEF3 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.29□□□□□ -2.62
CCDC112Q8NEF3 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.29□□□□□ -2.62
CCDC112Q8NEF3 AP000533.3-201ENST00000447704 118 ntBASIC-1.29□□□□□ -2.62
CCDC112Q8NEF3 AC097510.1-201ENST00000510945 133 ntBASIC-1.29□□□□□ -2.62
CCDC112Q8NEF3 RNU6-521P-201ENST00000516663 105 ntBASIC-1.29□□□□□ -2.62
CCDC112Q8NEF3 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.29□□□□□ -2.62
CCDC112Q8NEF3 MIR3149-201ENST00000584629 83 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 592.6 ms