Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC025166.1-201ENST00000612411 163 ntBASIC0.46□□□□□ -2.34
USP38Q8NB14 MIR376B-201ENST00000614515 100 ntBASIC0.46□□□□□ -2.34
USP38Q8NB14 AP001362.1-201ENST00000625165 124 ntBASIC0.46□□□□□ -2.34
USP38Q8NB14 MTND5P18-201ENST00000445624 1801 ntBASIC0.45□□□□□ -2.34
USP38Q8NB14 Y_RNA.56-201ENST00000362798 112 ntBASIC0.45□□□□□ -2.34
USP38Q8NB14 Y_RNA.127-201ENST00000363386 109 ntBASIC0.45□□□□□ -2.34
USP38Q8NB14 SNORA2A-201ENST00000383885 135 ntBASIC0.45□□□□□ -2.34
USP38Q8NB14 BX276092.1-201ENST00000427368 251 ntBASIC0.45□□□□□ -2.34
USP38Q8NB14 RNU6-772P-201ENST00000516042 105 ntBASIC0.45□□□□□ -2.34
USP38Q8NB14 RNA5SP227-201ENST00000516184 113 ntBASIC0.45□□□□□ -2.34
USP38Q8NB14 Y_RNA.703-201ENST00000516846 111 ntBASIC0.45□□□□□ -2.34
USP38Q8NB14 MIR548H5-201ENST00000580314 60 ntBASIC0.45□□□□□ -2.34
USP38Q8NB14 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.45□□□□□ -2.34
USP38Q8NB14 Y_RNA.344-201ENST00000365381 112 ntBASIC0.44□□□□□ -2.34
USP38Q8NB14 RNU6-746P-201ENST00000384112 109 ntBASIC0.44□□□□□ -2.34
USP38Q8NB14 MIR34C-201ENST00000384831 77 ntBASIC0.44□□□□□ -2.34
USP38Q8NB14 AC244669.1-204ENST00000621564 178 ntBASIC0.44□□□□□ -2.34
USP38Q8NB14 MIRLET7D-201ENST00000362263 87 ntBASIC0.43□□□□□ -2.34
USP38Q8NB14 Y_RNA.218-201ENST00000364218 104 ntBASIC0.43□□□□□ -2.34
USP38Q8NB14 SNORD28-201ENST00000384706 75 ntBASIC0.43□□□□□ -2.34
USP38Q8NB14 MIR548D2-201ENST00000384955 97 ntBASIC0.43□□□□□ -2.34
USP38Q8NB14 MIR4639-201ENST00000584938 69 ntBASIC0.43□□□□□ -2.34
USP38Q8NB14 SNORD115-24-201ENST00000363528 82 ntBASIC0.42□□□□□ -2.34
USP38Q8NB14 MIR635-201ENST00000384830 98 ntBASIC0.42□□□□□ -2.34
USP38Q8NB14 RNA5SP299-201ENST00000391203 116 ntBASIC0.42□□□□□ -2.34
USP38Q8NB14 RNA5SP47-201ENST00000517230 109 ntBASIC0.42□□□□□ -2.34
USP38Q8NB14 AC138869.1-201ENST00000568623 124 ntBASIC0.42□□□□□ -2.34
USP38Q8NB14 RNU7-10P-201ENST00000607194 63 ntBASIC0.42□□□□□ -2.34
USP38Q8NB14 MIR103A1-201ENST00000362165 78 ntBASIC0.41□□□□□ -2.34
USP38Q8NB14 SNORD118-201ENST00000363593 134 ntBASIC0.41□□□□□ -2.34
USP38Q8NB14 RNU6-704P-201ENST00000364162 103 ntBASIC0.41□□□□□ -2.34
USP38Q8NB14 Y_RNA.360-201ENST00000365512 102 ntBASIC0.41□□□□□ -2.34
USP38Q8NB14 MIR539-201ENST00000365690 78 ntBASIC0.41□□□□□ -2.34
USP38Q8NB14 SNORA7.5-201ENST00000410672 110 ntBASIC0.41□□□□□ -2.34
USP38Q8NB14 TRAJ51-201ENST00000504127 63 ntBASIC0.41□□□□□ -2.34
USP38Q8NB14 SCARNA16.5-201ENST00000517114 183 ntBASIC0.41□□□□□ -2.34
USP38Q8NB14 MIR5190-201ENST00000581537 80 ntBASIC0.41□□□□□ -2.34
USP38Q8NB14 AL157777.2-201ENST00000258070 137 ntBASIC0.4□□□□□ -2.35
USP38Q8NB14 Y_RNA.71-201ENST00000362892 104 ntBASIC0.4□□□□□ -2.35
USP38Q8NB14 SNORD50.2-201ENST00000365465 70 ntBASIC0.4□□□□□ -2.35
USP38Q8NB14 MIR548L-201ENST00000408303 86 ntBASIC0.4□□□□□ -2.35
USP38Q8NB14 AL353813.1-201ENST00000440700 253 ntBASIC0.4□□□□□ -2.35
USP38Q8NB14 AC091304.10-201ENST00000641554 121 ntBASIC0.4□□□□□ -2.35
USP38Q8NB14 SNORD44.1-201ENST00000363202 61 ntBASIC0.39□□□□□ -2.35
USP38Q8NB14 RNU6-30P-201ENST00000384561 107 ntBASIC0.39□□□□□ -2.35
USP38Q8NB14 MIR7107-201ENST00000611489 80 ntBASIC0.39□□□□□ -2.35
USP38Q8NB14 MIR6828-201ENST00000636181 60 ntBASIC0.39□□□□□ -2.35
USP38Q8NB14 RNU6-363P-201ENST00000362895 105 ntBASIC0.38□□□□□ -2.35
USP38Q8NB14 RNU6-80P-201ENST00000384195 107 ntBASIC0.38□□□□□ -2.35
USP38Q8NB14 Z95118.1-201ENST00000421372 247 ntBASIC0.38□□□□□ -2.35
USP38Q8NB14 SNRPGP12-201ENST00000449481 213 ntBASIC0.38□□□□□ -2.35
USP38Q8NB14 AC244505.6-201ENST00000452829 130 ntBASIC0.38□□□□□ -2.35
USP38Q8NB14 AL512310.12-203ENST00000640543 90 ntBASIC0.38□□□□□ -2.35
USP38Q8NB14 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.38□□□□□ -2.35
USP38Q8NB14 RNY4P6-201ENST00000363667 96 ntBASIC0.37□□□□□ -2.35
USP38Q8NB14 Y_RNA.247-201ENST00000364500 92 ntBASIC0.37□□□□□ -2.35
USP38Q8NB14 Y_RNA.346-201ENST00000365385 112 ntBASIC0.37□□□□□ -2.35
USP38Q8NB14 AC069271.1-201ENST00000445577 156 ntBASIC0.37□□□□□ -2.35
USP38Q8NB14 RNU6-659P-201ENST00000516454 104 ntBASIC0.37□□□□□ -2.35
USP38Q8NB14 MTND5P40-201ENST00000559945 246 ntBASIC0.37□□□□□ -2.35
USP38Q8NB14 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.37□□□□□ -2.35
USP38Q8NB14 Y_RNA.221-201ENST00000364248 96 ntBASIC0.36□□□□□ -2.35
USP38Q8NB14 Y_RNA.362-201ENST00000365518 110 ntBASIC0.36□□□□□ -2.35
USP38Q8NB14 RNU7-104P-201ENST00000459398 79 ntBASIC0.36□□□□□ -2.35
USP38Q8NB14 RNU6-1006P-201ENST00000516998 103 ntBASIC0.36□□□□□ -2.35
USP38Q8NB14 RNU7-161P-201ENST00000517289 62 ntBASIC0.36□□□□□ -2.35
USP38Q8NB14 MIR3914-2-201ENST00000637339 95 ntBASIC0.36□□□□□ -2.35
USP38Q8NB14 Y_RNA.155-201ENST00000363632 101 ntBASIC0.35□□□□□ -2.35
USP38Q8NB14 SNORD38.2-201ENST00000384470 69 ntBASIC0.35□□□□□ -2.35
USP38Q8NB14 MIR599-201ENST00000385069 95 ntBASIC0.35□□□□□ -2.35
USP38Q8NB14 MIR548M-201ENST00000408260 86 ntBASIC0.35□□□□□ -2.35
USP38Q8NB14 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.35□□□□□ -2.35
USP38Q8NB14 RNU2-59P-201ENST00000410482 191 ntBASIC0.35□□□□□ -2.35
USP38Q8NB14 RNU7-106P-201ENST00000459514 67 ntBASIC0.35□□□□□ -2.35
USP38Q8NB14 Y_RNA.712-201ENST00000517011 92 ntBASIC0.35□□□□□ -2.35
USP38Q8NB14 AL035470.1-201ENST00000622571 220 ntBASIC0.35□□□□□ -2.35
USP38Q8NB14 AC090625.1-201ENST00000357130 210 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 MIR409-201ENST00000362237 79 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 RNU6-1099P-201ENST00000363533 107 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 Y_RNA.423-201ENST00000384057 113 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 RNU6-816P-201ENST00000390914 107 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 RNU6-1268P-201ENST00000391214 107 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 RNU6-1239P-201ENST00000391310 107 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 MIR548I2-201ENST00000408348 149 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 SNORD63B-201ENST00000411005 70 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 AC073261.1-201ENST00000429409 121 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 RNU7-195P-201ENST00000458793 62 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 SNORD33.1-201ENST00000516213 88 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 RNU6-850P-201ENST00000516934 103 ntBASIC0.34□□□□□ -2.36
USP38Q8NB14 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.34□□□□□ -2.36
USP38Q8NB14 RNU6-1313P-201ENST00000362622 102 ntBASIC0.33□□□□□ -2.36
USP38Q8NB14 RNU6-409P-201ENST00000384114 104 ntBASIC0.33□□□□□ -2.36
USP38Q8NB14 Y_RNA.507-201ENST00000384500 99 ntBASIC0.33□□□□□ -2.36
USP38Q8NB14 MIR548A1-201ENST00000385041 97 ntBASIC0.33□□□□□ -2.36
USP38Q8NB14 RNU6-758P-201ENST00000516292 89 ntBASIC0.33□□□□□ -2.36
USP38Q8NB14 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.33□□□□□ -2.36
USP38Q8NB14 AL162726.3-218ENST00000636401 95 ntBASIC0.33□□□□□ -2.36
USP38Q8NB14 RNA5SP403-201ENST00000363598 108 ntBASIC0.32□□□□□ -2.36
USP38Q8NB14 RNU6-726P-201ENST00000364680 107 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms