Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 BX276092.1-201ENST00000427368 251 ntBASIC0.64□□□□□ -2.31
PRPF38AQ8NAV1 RNA5SP47-201ENST00000517230 109 ntBASIC0.64□□□□□ -2.31
PRPF38AQ8NAV1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.64□□□□□ -2.31
PRPF38AQ8NAV1 AC132825.6-201ENST00000638861 357 ntBASIC0.64□□□□□ -2.31
PRPF38AQ8NAV1 RNU6-170P-201ENST00000362832 104 ntBASIC0.63□□□□□ -2.31
PRPF38AQ8NAV1 SNORD38.1-201ENST00000363863 68 ntBASIC0.63□□□□□ -2.31
PRPF38AQ8NAV1 RNA5SP245-201ENST00000364239 121 ntBASIC0.63□□□□□ -2.31
PRPF38AQ8NAV1 Y_RNA.563-201ENST00000384707 108 ntBASIC0.63□□□□□ -2.31
PRPF38AQ8NAV1 AC097635.1-201ENST00000450678 155 ntBASIC0.63□□□□□ -2.31
PRPF38AQ8NAV1 SNORA68.3-201ENST00000515906 83 ntBASIC0.63□□□□□ -2.31
PRPF38AQ8NAV1 SNORD33.1-201ENST00000516213 88 ntBASIC0.63□□□□□ -2.31
PRPF38AQ8NAV1 RNU6-62P-201ENST00000516526 102 ntBASIC0.63□□□□□ -2.31
PRPF38AQ8NAV1 AC091304.10-201ENST00000641554 121 ntBASIC0.63□□□□□ -2.31
PRPF38AQ8NAV1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
PRPF38AQ8NAV1 RNU6-1117P-201ENST00000384525 104 ntBASIC0.62□□□□□ -2.31
PRPF38AQ8NAV1 MIR518A1-201ENST00000385068 85 ntBASIC0.62□□□□□ -2.31
PRPF38AQ8NAV1 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
PRPF38AQ8NAV1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.62□□□□□ -2.31
PRPF38AQ8NAV1 SNRPGP12-201ENST00000449481 213 ntBASIC0.62□□□□□ -2.31
PRPF38AQ8NAV1 RNA5SP268-201ENST00000516828 124 ntBASIC0.62□□□□□ -2.31
PRPF38AQ8NAV1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
PRPF38AQ8NAV1 SNORD115-24-201ENST00000363528 82 ntBASIC0.61□□□□□ -2.31
PRPF38AQ8NAV1 MIR519A1-201ENST00000385257 85 ntBASIC0.61□□□□□ -2.31
PRPF38AQ8NAV1 AL157398.1-201ENST00000452981 186 ntBASIC0.61□□□□□ -2.31
PRPF38AQ8NAV1 AC096720.1-201ENST00000604441 183 ntBASIC0.61□□□□□ -2.31
PRPF38AQ8NAV1 SNORA25.18-201ENST00000607153 114 ntBASIC0.61□□□□□ -2.31
PRPF38AQ8NAV1 AC244669.1-204ENST00000621564 178 ntBASIC0.61□□□□□ -2.31
PRPF38AQ8NAV1 AC243829.3-201ENST00000622177 108 ntBASIC0.61□□□□□ -2.31
PRPF38AQ8NAV1 MIR6828-201ENST00000636181 60 ntBASIC0.61□□□□□ -2.31
PRPF38AQ8NAV1 Y_RNA.49-201ENST00000362714 112 ntBASIC0.6□□□□□ -2.31
PRPF38AQ8NAV1 SNORD114-23-201ENST00000363536 72 ntBASIC0.6□□□□□ -2.31
PRPF38AQ8NAV1 RNU6-863P-201ENST00000515989 104 ntBASIC0.6□□□□□ -2.31
PRPF38AQ8NAV1 RNA5SP227-201ENST00000516184 113 ntBASIC0.6□□□□□ -2.31
PRPF38AQ8NAV1 MIR3910-1-201ENST00000580936 111 ntBASIC0.6□□□□□ -2.31
PRPF38AQ8NAV1 SNORA36.1-201ENST00000363424 132 ntBASIC0.59□□□□□ -2.31
PRPF38AQ8NAV1 SNORD118-201ENST00000363593 134 ntBASIC0.59□□□□□ -2.31
PRPF38AQ8NAV1 Y_RNA.342-201ENST00000365352 113 ntBASIC0.59□□□□□ -2.31
PRPF38AQ8NAV1 MIR548A1-201ENST00000385041 97 ntBASIC0.59□□□□□ -2.31
PRPF38AQ8NAV1 SPINT5P-201ENST00000448174 155 ntBASIC0.59□□□□□ -2.31
PRPF38AQ8NAV1 TRAJ51-201ENST00000504127 63 ntBASIC0.59□□□□□ -2.31
PRPF38AQ8NAV1 RNU6-412P-201ENST00000516434 106 ntBASIC0.59□□□□□ -2.31
PRPF38AQ8NAV1 RNU6-90P-201ENST00000606352 106 ntBASIC0.59□□□□□ -2.31
PRPF38AQ8NAV1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.58□□□□□ -2.32
PRPF38AQ8NAV1 Y_RNA.353-201ENST00000365440 108 ntBASIC0.58□□□□□ -2.32
PRPF38AQ8NAV1 MIR599-201ENST00000385069 95 ntBASIC0.58□□□□□ -2.32
PRPF38AQ8NAV1 SNORD63B-201ENST00000411005 70 ntBASIC0.58□□□□□ -2.32
PRPF38AQ8NAV1 RNU6-850P-201ENST00000516934 103 ntBASIC0.58□□□□□ -2.32
PRPF38AQ8NAV1 AL442128.1-201ENST00000615151 90 ntBASIC0.58□□□□□ -2.32
PRPF38AQ8NAV1 AC010487.4-201ENST00000637027 61 ntBASIC0.58□□□□□ -2.32
PRPF38AQ8NAV1 RNU6-880P-201ENST00000384526 107 ntBASIC0.57□□□□□ -2.32
PRPF38AQ8NAV1 AL035470.1-201ENST00000622571 220 ntBASIC0.57□□□□□ -2.32
PRPF38AQ8NAV1 MIRLET7D-201ENST00000362263 87 ntBASIC0.56□□□□□ -2.32
PRPF38AQ8NAV1 Y_RNA.377-201ENST00000365644 108 ntBASIC0.56□□□□□ -2.32
PRPF38AQ8NAV1 RNU6-1201P-201ENST00000384227 107 ntBASIC0.56□□□□□ -2.32
PRPF38AQ8NAV1 MIR193B-201ENST00000384907 83 ntBASIC0.56□□□□□ -2.32
PRPF38AQ8NAV1 MIR548G-201ENST00000408442 89 ntBASIC0.56□□□□□ -2.32
PRPF38AQ8NAV1 AC114737.2-201ENST00000421583 173 ntBASIC0.56□□□□□ -2.32
PRPF38AQ8NAV1 RNU6-1006P-201ENST00000516998 103 ntBASIC0.56□□□□□ -2.32
PRPF38AQ8NAV1 AC068339.1-201ENST00000526965 141 ntBASIC0.56□□□□□ -2.32
PRPF38AQ8NAV1 MIR5087-201ENST00000635826 76 ntBASIC0.56□□□□□ -2.32
PRPF38AQ8NAV1 AC090625.1-201ENST00000357130 210 ntBASIC0.55□□□□□ -2.32
PRPF38AQ8NAV1 AL353813.1-201ENST00000440700 253 ntBASIC0.55□□□□□ -2.32
PRPF38AQ8NAV1 Y_RNA.809-201ENST00000516058 95 ntBASIC0.55□□□□□ -2.32
PRPF38AQ8NAV1 RNU6-789P-201ENST00000517105 102 ntBASIC0.55□□□□□ -2.32
PRPF38AQ8NAV1 MIR4694-201ENST00000578534 80 ntBASIC0.55□□□□□ -2.32
PRPF38AQ8NAV1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.55□□□□□ -2.32
PRPF38AQ8NAV1 RNU6-22P-201ENST00000384355 107 ntBASIC0.54□□□□□ -2.32
PRPF38AQ8NAV1 SNORD116-21-201ENST00000384507 92 ntBASIC0.54□□□□□ -2.32
PRPF38AQ8NAV1 MIR548L-201ENST00000408303 86 ntBASIC0.54□□□□□ -2.32
PRPF38AQ8NAV1 RNU2-59P-201ENST00000410482 191 ntBASIC0.54□□□□□ -2.32
PRPF38AQ8NAV1 RNU6-1260P-201ENST00000362944 107 ntBASIC0.53□□□□□ -2.32
PRPF38AQ8NAV1 Y_RNA.261-201ENST00000364631 102 ntBASIC0.53□□□□□ -2.32
PRPF38AQ8NAV1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.53□□□□□ -2.32
PRPF38AQ8NAV1 AL365222.1-201ENST00000614661 98 ntBASIC0.53□□□□□ -2.32
PRPF38AQ8NAV1 AC067863.3-201ENST00000624172 122 ntBASIC0.53□□□□□ -2.32
PRPF38AQ8NAV1 Y_RNA.35-201ENST00000362601 101 ntBASIC0.52□□□□□ -2.33
PRPF38AQ8NAV1 Y_RNA.281-201ENST00000364774 94 ntBASIC0.52□□□□□ -2.33
PRPF38AQ8NAV1 Y_RNA.549-201ENST00000384657 102 ntBASIC0.52□□□□□ -2.33
PRPF38AQ8NAV1 RNU6-1168P-201ENST00000390831 104 ntBASIC0.52□□□□□ -2.33
PRPF38AQ8NAV1 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.52□□□□□ -2.33
PRPF38AQ8NAV1 RNU6-479P-201ENST00000516348 105 ntBASIC0.52□□□□□ -2.33
PRPF38AQ8NAV1 MIR1273G-201ENST00000577677 100 ntBASIC0.52□□□□□ -2.33
PRPF38AQ8NAV1 MIR5009-201ENST00000578736 100 ntBASIC0.52□□□□□ -2.33
PRPF38AQ8NAV1 MIR7107-201ENST00000611489 80 ntBASIC0.52□□□□□ -2.33
PRPF38AQ8NAV1 AC243829.6-201ENST00000612652 106 ntBASIC0.52□□□□□ -2.33
PRPF38AQ8NAV1 RNU6-834P-201ENST00000362367 110 ntBASIC0.51□□□□□ -2.33
PRPF38AQ8NAV1 RNA5SP403-201ENST00000363598 108 ntBASIC0.51□□□□□ -2.33
PRPF38AQ8NAV1 RNU7-195P-201ENST00000458793 62 ntBASIC0.51□□□□□ -2.33
PRPF38AQ8NAV1 RNU7-104P-201ENST00000459398 79 ntBASIC0.51□□□□□ -2.33
PRPF38AQ8NAV1 RNU6-313P-201ENST00000516317 112 ntBASIC0.51□□□□□ -2.33
PRPF38AQ8NAV1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.51□□□□□ -2.33
PRPF38AQ8NAV1 RNY3P2-201ENST00000362918 102 ntBASIC0.5□□□□□ -2.33
PRPF38AQ8NAV1 Y_RNA.221-201ENST00000364248 96 ntBASIC0.5□□□□□ -2.33
PRPF38AQ8NAV1 RNA5SP205-201ENST00000364653 136 ntBASIC0.5□□□□□ -2.33
PRPF38AQ8NAV1 U8.6-201ENST00000364939 135 ntBASIC0.5□□□□□ -2.33
PRPF38AQ8NAV1 Y_RNA.57-201ENST00000362806 113 ntBASIC0.49□□□□□ -2.33
PRPF38AQ8NAV1 Y_RNA.173-201ENST00000363776 113 ntBASIC0.49□□□□□ -2.33
PRPF38AQ8NAV1 RNU6-1126P-201ENST00000384002 107 ntBASIC0.49□□□□□ -2.33
PRPF38AQ8NAV1 RNU6-1154P-201ENST00000391001 104 ntBASIC0.49□□□□□ -2.33
PRPF38AQ8NAV1 RNU6-1254P-201ENST00000391266 104 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms