Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 SNORD38.2-201ENST00000384470 69 ntBASIC0.62□□□□□ -2.31
VPS52Q8N1B4 AC244505.6-201ENST00000452829 130 ntBASIC0.62□□□□□ -2.31
VPS52Q8N1B4 RNU6-469P-201ENST00000516253 101 ntBASIC0.62□□□□□ -2.31
VPS52Q8N1B4 RNU6-834P-201ENST00000362367 110 ntBASIC0.61□□□□□ -2.31
VPS52Q8N1B4 RNU6-1201P-201ENST00000384227 107 ntBASIC0.61□□□□□ -2.31
VPS52Q8N1B4 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
VPS52Q8N1B4 BX276092.1-201ENST00000427368 251 ntBASIC0.61□□□□□ -2.31
VPS52Q8N1B4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.61□□□□□ -2.31
VPS52Q8N1B4 RNU6-229P-201ENST00000516614 102 ntBASIC0.61□□□□□ -2.31
VPS52Q8N1B4 AC018659.1-201ENST00000551083 169 ntBASIC0.61□□□□□ -2.31
VPS52Q8N1B4 AC138869.1-201ENST00000568623 124 ntBASIC0.61□□□□□ -2.31
VPS52Q8N1B4 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
VPS52Q8N1B4 SNORA63.5-201ENST00000363548 123 ntBASIC0.6□□□□□ -2.31
VPS52Q8N1B4 SNORD38.1-201ENST00000363863 68 ntBASIC0.6□□□□□ -2.31
VPS52Q8N1B4 Y_RNA.377-201ENST00000365644 108 ntBASIC0.6□□□□□ -2.31
VPS52Q8N1B4 RNU6-880P-201ENST00000384526 107 ntBASIC0.6□□□□□ -2.31
VPS52Q8N1B4 MIR519A1-201ENST00000385257 85 ntBASIC0.6□□□□□ -2.31
VPS52Q8N1B4 AC068339.1-201ENST00000526965 141 ntBASIC0.6□□□□□ -2.31
VPS52Q8N1B4 MIR4639-201ENST00000584938 69 ntBASIC0.6□□□□□ -2.31
VPS52Q8N1B4 AL512310.12-203ENST00000640543 90 ntBASIC0.6□□□□□ -2.31
VPS52Q8N1B4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.59□□□□□ -2.31
VPS52Q8N1B4 RNU6-1144P-201ENST00000384247 104 ntBASIC0.59□□□□□ -2.31
VPS52Q8N1B4 MIR635-201ENST00000384830 98 ntBASIC0.59□□□□□ -2.31
VPS52Q8N1B4 RNU6-1154P-201ENST00000391001 104 ntBASIC0.59□□□□□ -2.31
VPS52Q8N1B4 TRAJ51-201ENST00000504127 63 ntBASIC0.59□□□□□ -2.31
VPS52Q8N1B4 RNU6-313P-201ENST00000516317 112 ntBASIC0.59□□□□□ -2.31
VPS52Q8N1B4 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.59□□□□□ -2.31
VPS52Q8N1B4 MIR6828-201ENST00000636181 60 ntBASIC0.59□□□□□ -2.31
VPS52Q8N1B4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.59□□□□□ -2.31
VPS52Q8N1B4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
VPS52Q8N1B4 U8.6-201ENST00000364939 135 ntBASIC0.58□□□□□ -2.32
VPS52Q8N1B4 RNU6-945P-201ENST00000383947 107 ntBASIC0.58□□□□□ -2.32
VPS52Q8N1B4 SNORD116-21-201ENST00000384507 92 ntBASIC0.58□□□□□ -2.32
VPS52Q8N1B4 SNORD28-201ENST00000384706 75 ntBASIC0.58□□□□□ -2.32
VPS52Q8N1B4 RNU6-476P-201ENST00000384726 107 ntBASIC0.58□□□□□ -2.32
VPS52Q8N1B4 RNU2-51P-201ENST00000410708 197 ntBASIC0.58□□□□□ -2.32
VPS52Q8N1B4 RN7SKP12-201ENST00000516275 143 ntBASIC0.58□□□□□ -2.32
VPS52Q8N1B4 RNA5SP47-201ENST00000517230 109 ntBASIC0.58□□□□□ -2.32
VPS52Q8N1B4 MIR4694-201ENST00000578534 80 ntBASIC0.58□□□□□ -2.32
VPS52Q8N1B4 AL442128.1-201ENST00000615151 90 ntBASIC0.58□□□□□ -2.32
VPS52Q8N1B4 MIR5087-201ENST00000635826 76 ntBASIC0.58□□□□□ -2.32
VPS52Q8N1B4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
VPS52Q8N1B4 Y_RNA.49-201ENST00000362714 112 ntBASIC0.57□□□□□ -2.32
VPS52Q8N1B4 SNORA36.1-201ENST00000363424 132 ntBASIC0.57□□□□□ -2.32
VPS52Q8N1B4 Y_RNA.247-201ENST00000364500 92 ntBASIC0.57□□□□□ -2.32
VPS52Q8N1B4 RNA5SP517-201ENST00000364724 117 ntBASIC0.57□□□□□ -2.32
VPS52Q8N1B4 Y_RNA.323-201ENST00000365157 109 ntBASIC0.57□□□□□ -2.32
VPS52Q8N1B4 Y_RNA.567-201ENST00000384736 106 ntBASIC0.57□□□□□ -2.32
VPS52Q8N1B4 MIR577-201ENST00000385196 96 ntBASIC0.57□□□□□ -2.32
VPS52Q8N1B4 RNU6-1064P-201ENST00000410626 104 ntBASIC0.57□□□□□ -2.32
VPS52Q8N1B4 AC097635.1-201ENST00000450678 155 ntBASIC0.57□□□□□ -2.32
VPS52Q8N1B4 RNU6-850P-201ENST00000516934 103 ntBASIC0.57□□□□□ -2.32
VPS52Q8N1B4 SCARNA16.5-201ENST00000517114 183 ntBASIC0.57□□□□□ -2.32
VPS52Q8N1B4 MIR5009-201ENST00000578736 100 ntBASIC0.57□□□□□ -2.32
VPS52Q8N1B4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.57□□□□□ -2.32
VPS52Q8N1B4 MIR924-201ENST00000638017 53 ntBASIC0.57□□□□□ -2.32
VPS52Q8N1B4 Y_RNA.35-201ENST00000362601 101 ntBASIC0.56□□□□□ -2.32
VPS52Q8N1B4 RNU6-170P-201ENST00000362832 104 ntBASIC0.56□□□□□ -2.32
VPS52Q8N1B4 AL606753.1-201ENST00000427435 87 ntBASIC0.56□□□□□ -2.32
VPS52Q8N1B4 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
VPS52Q8N1B4 AC092634.7-201ENST00000621022 103 ntBASIC0.56□□□□□ -2.32
VPS52Q8N1B4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.56□□□□□ -2.32
VPS52Q8N1B4 Y_RNA.173-201ENST00000363776 113 ntBASIC0.55□□□□□ -2.32
VPS52Q8N1B4 Y_RNA.342-201ENST00000365352 113 ntBASIC0.55□□□□□ -2.32
VPS52Q8N1B4 SNORA8.2-201ENST00000384372 139 ntBASIC0.55□□□□□ -2.32
VPS52Q8N1B4 MIR548G-201ENST00000408442 89 ntBASIC0.55□□□□□ -2.32
VPS52Q8N1B4 SNORD63B-201ENST00000411005 70 ntBASIC0.55□□□□□ -2.32
VPS52Q8N1B4 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
VPS52Q8N1B4 RNU6-412P-201ENST00000516434 106 ntBASIC0.55□□□□□ -2.32
VPS52Q8N1B4 RNY3P2-201ENST00000362918 102 ntBASIC0.54□□□□□ -2.32
VPS52Q8N1B4 RNU6-1229P-201ENST00000364295 107 ntBASIC0.54□□□□□ -2.32
VPS52Q8N1B4 Y_RNA.258-201ENST00000364613 105 ntBASIC0.54□□□□□ -2.32
VPS52Q8N1B4 SNORA40.8-201ENST00000411034 126 ntBASIC0.54□□□□□ -2.32
VPS52Q8N1B4 RNA5SP330-201ENST00000517096 96 ntBASIC0.54□□□□□ -2.32
VPS52Q8N1B4 MTND5P40-201ENST00000559945 246 ntBASIC0.54□□□□□ -2.32
VPS52Q8N1B4 RNU6-90P-201ENST00000606352 106 ntBASIC0.54□□□□□ -2.32
VPS52Q8N1B4 AC244669.1-204ENST00000621564 178 ntBASIC0.54□□□□□ -2.32
VPS52Q8N1B4 Y_RNA.30-201ENST00000362572 97 ntBASIC0.53□□□□□ -2.32
VPS52Q8N1B4 Y_RNA.115-201ENST00000363272 98 ntBASIC0.53□□□□□ -2.32
VPS52Q8N1B4 RNU6-832P-201ENST00000363319 107 ntBASIC0.53□□□□□ -2.32
VPS52Q8N1B4 RNU6-1099P-201ENST00000363533 107 ntBASIC0.53□□□□□ -2.32
VPS52Q8N1B4 RNA5SP457-201ENST00000363657 124 ntBASIC0.53□□□□□ -2.32
VPS52Q8N1B4 AC114737.2-201ENST00000421583 173 ntBASIC0.53□□□□□ -2.32
VPS52Q8N1B4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.53□□□□□ -2.32
VPS52Q8N1B4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.53□□□□□ -2.32
VPS52Q8N1B4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.53□□□□□ -2.32
VPS52Q8N1B4 SNORD118-201ENST00000363593 134 ntBASIC0.52□□□□□ -2.33
VPS52Q8N1B4 RNA5SP403-201ENST00000363598 108 ntBASIC0.52□□□□□ -2.33
VPS52Q8N1B4 RNU6-1107P-201ENST00000364817 104 ntBASIC0.52□□□□□ -2.33
VPS52Q8N1B4 Y_RNA.374-201ENST00000365606 101 ntBASIC0.52□□□□□ -2.33
VPS52Q8N1B4 RNU6-1056P-201ENST00000383996 107 ntBASIC0.52□□□□□ -2.33
VPS52Q8N1B4 MIR518A1-201ENST00000385068 85 ntBASIC0.52□□□□□ -2.33
VPS52Q8N1B4 MIR599-201ENST00000385069 95 ntBASIC0.52□□□□□ -2.33
VPS52Q8N1B4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.52□□□□□ -2.33
VPS52Q8N1B4 SPINT5P-201ENST00000448174 155 ntBASIC0.52□□□□□ -2.33
VPS52Q8N1B4 RNA5SP268-201ENST00000516828 124 ntBASIC0.52□□□□□ -2.33
VPS52Q8N1B4 MIR8087-201ENST00000612745 78 ntBASIC0.52□□□□□ -2.33
VPS52Q8N1B4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
VPS52Q8N1B4 RNU6-1260P-201ENST00000362944 107 ntBASIC0.51□□□□□ -2.33
VPS52Q8N1B4 SNORD115-24-201ENST00000363528 82 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms