Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 Y_RNA.283-201ENST00000364798 112 ntBASIC1.91□□□□□ -2.1
SIX5Q8N196 RNU6-811P-201ENST00000384069 107 ntBASIC1.91□□□□□ -2.1
SIX5Q8N196 MIR222-201ENST00000384992 110 ntBASIC1.91□□□□□ -2.1
SIX5Q8N196 MIR9-3-201ENST00000385084 90 ntBASIC1.91□□□□□ -2.1
SIX5Q8N196 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.91□□□□□ -2.1
SIX5Q8N196 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SIX5Q8N196 SNORA70.22-201ENST00000517160 124 ntBASIC1.91□□□□□ -2.1
SIX5Q8N196 MIR4303-201ENST00000581299 66 ntBASIC1.91□□□□□ -2.1
SIX5Q8N196 BX248123.2-201ENST00000606318 124 ntBASIC1.91□□□□□ -2.1
SIX5Q8N196 Y_RNA.316-201ENST00000365118 111 ntBASIC1.9□□□□□ -2.11
SIX5Q8N196 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SIX5Q8N196 RNU6-279P-201ENST00000391297 101 ntBASIC1.9□□□□□ -2.11
SIX5Q8N196 MIR938-201ENST00000401216 83 ntBASIC1.9□□□□□ -2.11
SIX5Q8N196 AC067940.1-201ENST00000458411 300 ntBASIC1.9□□□□□ -2.11
SIX5Q8N196 RNU7-195P-201ENST00000458793 62 ntBASIC1.9□□□□□ -2.11
SIX5Q8N196 TRAJ51-201ENST00000504127 63 ntBASIC1.9□□□□□ -2.11
SIX5Q8N196 SNORD79.1-201ENST00000516069 84 ntBASIC1.9□□□□□ -2.11
SIX5Q8N196 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
SIX5Q8N196 Y_RNA.42-201ENST00000362660 108 ntBASIC1.89□□□□□ -2.11
SIX5Q8N196 Y_RNA.224-201ENST00000364308 111 ntBASIC1.89□□□□□ -2.11
SIX5Q8N196 MIR100-201ENST00000385259 80 ntBASIC1.89□□□□□ -2.11
SIX5Q8N196 SNORA67.5-201ENST00000391036 107 ntBASIC1.89□□□□□ -2.11
SIX5Q8N196 snoU13.18-201ENST00000459483 104 ntBASIC1.89□□□□□ -2.11
SIX5Q8N196 Y_RNA.809-201ENST00000516058 95 ntBASIC1.89□□□□□ -2.11
SIX5Q8N196 RNU6-977P-201ENST00000516411 103 ntBASIC1.89□□□□□ -2.11
SIX5Q8N196 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.89□□□□□ -2.11
SIX5Q8N196 MIR3122-201ENST00000577243 73 ntBASIC1.89□□□□□ -2.11
SIX5Q8N196 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.89□□□□□ -2.11
SIX5Q8N196 SNORD92-201ENST00000585078 85 ntBASIC1.89□□□□□ -2.11
SIX5Q8N196 MIR548U-201ENST00000390728 81 ntBASIC1.88□□□□□ -2.11
SIX5Q8N196 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.88□□□□□ -2.11
SIX5Q8N196 AC092628.1-201ENST00000436250 252 ntBASIC1.88□□□□□ -2.11
SIX5Q8N196 AC025033.1-201ENST00000463883 194 ntBASIC1.88□□□□□ -2.11
SIX5Q8N196 RNU6-857P-201ENST00000515893 110 ntBASIC1.88□□□□□ -2.11
SIX5Q8N196 RNU7-153P-201ENST00000516455 62 ntBASIC1.88□□□□□ -2.11
SIX5Q8N196 AC027335.2-201ENST00000624030 375 ntBASIC1.88□□□□□ -2.11
SIX5Q8N196 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.88□□□□□ -2.11
SIX5Q8N196 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SIX5Q8N196 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SIX5Q8N196 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.88□□□□□ -2.11
SIX5Q8N196 AC140658.3-201ENST00000567603 271 ntBASIC1.87□□□□□ -2.11
SIX5Q8N196 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SIX5Q8N196 MIR1-1-201ENST00000362147 71 ntBASIC1.86□□□□□ -2.11
SIX5Q8N196 RNA5SP160-201ENST00000364866 120 ntBASIC1.86□□□□□ -2.11
SIX5Q8N196 MIR519A1-201ENST00000385257 85 ntBASIC1.86□□□□□ -2.11
SIX5Q8N196 SUMO2P12-201ENST00000405924 140 ntBASIC1.86□□□□□ -2.11
SIX5Q8N196 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.86□□□□□ -2.11
SIX5Q8N196 SNORA25.13-201ENST00000516395 103 ntBASIC1.86□□□□□ -2.11
SIX5Q8N196 AC138907.6-201ENST00000568401 126 ntBASIC1.86□□□□□ -2.11
SIX5Q8N196 AC138869.1-201ENST00000568623 124 ntBASIC1.86□□□□□ -2.11
SIX5Q8N196 MIR4796-201ENST00000580742 81 ntBASIC1.86□□□□□ -2.11
SIX5Q8N196 RNU6-957P-201ENST00000363652 99 ntBASIC1.85□□□□□ -2.11
SIX5Q8N196 Y_RNA.244-201ENST00000364484 109 ntBASIC1.85□□□□□ -2.11
SIX5Q8N196 RNU6-24P-201ENST00000384440 107 ntBASIC1.85□□□□□ -2.11
SIX5Q8N196 SNORD12-201ENST00000391002 90 ntBASIC1.85□□□□□ -2.11
SIX5Q8N196 RNU7-102P-201ENST00000458948 62 ntBASIC1.85□□□□□ -2.11
SIX5Q8N196 RNU7-95P-201ENST00000459222 64 ntBASIC1.85□□□□□ -2.11
SIX5Q8N196 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.85□□□□□ -2.11
SIX5Q8N196 MIR502-201ENST00000606349 86 ntBASIC1.85□□□□□ -2.11
SIX5Q8N196 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.85□□□□□ -2.11
SIX5Q8N196 RNU6-535P-201ENST00000384722 107 ntBASIC1.84□□□□□ -2.11
SIX5Q8N196 RNU1-119P-201ENST00000391122 165 ntBASIC1.84□□□□□ -2.11
SIX5Q8N196 AC097635.1-201ENST00000450678 155 ntBASIC1.84□□□□□ -2.11
SIX5Q8N196 RNA5SP395-201ENST00000516567 118 ntBASIC1.84□□□□□ -2.11
SIX5Q8N196 RNU6-448P-201ENST00000517052 107 ntBASIC1.84□□□□□ -2.11
SIX5Q8N196 AL645939.4-201ENST00000604495 135 ntBASIC1.84□□□□□ -2.11
SIX5Q8N196 RNU6-1260P-201ENST00000362944 107 ntBASIC1.83□□□□□ -2.12
SIX5Q8N196 AC104996.3-201ENST00000590718 94 ntBASIC1.83□□□□□ -2.12
SIX5Q8N196 Y_RNA.327-201ENST00000365201 102 ntBASIC1.82□□□□□ -2.12
SIX5Q8N196 RNU6-75P-201ENST00000515944 104 ntBASIC1.82□□□□□ -2.12
SIX5Q8N196 MIR4804-201ENST00000581683 73 ntBASIC1.82□□□□□ -2.12
SIX5Q8N196 TRDV1-202ENST00000621643 102 ntBASIC1.82□□□□□ -2.12
SIX5Q8N196 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SIX5Q8N196 Y_RNA.491-201ENST00000384417 107 ntBASIC1.81□□□□□ -2.12
SIX5Q8N196 MIR520F-201ENST00000384824 87 ntBASIC1.81□□□□□ -2.12
SIX5Q8N196 MIR599-201ENST00000385069 95 ntBASIC1.81□□□□□ -2.12
SIX5Q8N196 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SIX5Q8N196 MIR3064-201ENST00000581130 66 ntBASIC1.81□□□□□ -2.12
SIX5Q8N196 AL157834.3-201ENST00000615543 103 ntBASIC1.81□□□□□ -2.12
SIX5Q8N196 MIRLET7F1-201ENST00000362202 87 ntBASIC1.8□□□□□ -2.12
SIX5Q8N196 RNA5SP292-201ENST00000390974 118 ntBASIC1.8□□□□□ -2.12
SIX5Q8N196 RNU6-129P-201ENST00000391022 107 ntBASIC1.8□□□□□ -2.12
SIX5Q8N196 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.8□□□□□ -2.12
SIX5Q8N196 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.8□□□□□ -2.12
SIX5Q8N196 SNORA18.5-201ENST00000516616 101 ntBASIC1.8□□□□□ -2.12
SIX5Q8N196 MIR4712-201ENST00000583750 82 ntBASIC1.8□□□□□ -2.12
SIX5Q8N196 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SIX5Q8N196 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
SIX5Q8N196 RNU6-291P-201ENST00000384720 107 ntBASIC1.79□□□□□ -2.12
SIX5Q8N196 MIR1276-201ENST00000408707 83 ntBASIC1.79□□□□□ -2.12
SIX5Q8N196 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.79□□□□□ -2.12
SIX5Q8N196 RNU6-132P-201ENST00000383863 107 ntBASIC1.78□□□□□ -2.12
SIX5Q8N196 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SIX5Q8N196 AC019288.1-201ENST00000557918 224 ntBASIC1.78□□□□□ -2.12
SIX5Q8N196 MIR4255-201ENST00000579351 72 ntBASIC1.78□□□□□ -2.12
SIX5Q8N196 AC008608.1-201ENST00000603910 127 ntBASIC1.78□□□□□ -2.12
SIX5Q8N196 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.78□□□□□ -2.12
SIX5Q8N196 SNORA25-201ENST00000384384 134 ntBASIC1.77□□□□□ -2.13
SIX5Q8N196 MIR1827-201ENST00000408549 66 ntBASIC1.77□□□□□ -2.13
SIX5Q8N196 RNU6-380P-201ENST00000410207 107 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms