Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 snoU13.15-201ENST00000459407 104 ntBASIC0.93□□□□□ -2.26
LYSMD2Q8IV50 Y_RNA.648-201ENST00000459455 110 ntBASIC0.93□□□□□ -2.26
LYSMD2Q8IV50 MIR4295-201ENST00000585286 85 ntBASIC0.93□□□□□ -2.26
LYSMD2Q8IV50 AC025521.1-201ENST00000621624 286 ntBASIC0.93□□□□□ -2.26
LYSMD2Q8IV50 RNA5SP245-201ENST00000364239 121 ntBASIC0.92□□□□□ -2.26
LYSMD2Q8IV50 MIR1289-2-201ENST00000408360 111 ntBASIC0.92□□□□□ -2.26
LYSMD2Q8IV50 RNY4P30-201ENST00000410216 95 ntBASIC0.92□□□□□ -2.26
LYSMD2Q8IV50 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.92□□□□□ -2.26
LYSMD2Q8IV50 MIR4421-201ENST00000578133 69 ntBASIC0.92□□□□□ -2.26
LYSMD2Q8IV50 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.92□□□□□ -2.26
LYSMD2Q8IV50 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.92□□□□□ -2.26
LYSMD2Q8IV50 RNU6-110P-201ENST00000384508 104 ntBASIC0.91□□□□□ -2.26
LYSMD2Q8IV50 RNA5SP222-201ENST00000411039 105 ntBASIC0.91□□□□□ -2.26
LYSMD2Q8IV50 RNU6-162P-201ENST00000516228 103 ntBASIC0.91□□□□□ -2.26
LYSMD2Q8IV50 MIR4639-201ENST00000584938 69 ntBASIC0.91□□□□□ -2.26
LYSMD2Q8IV50 AC211469.2-201ENST00000605461 205 ntBASIC0.91□□□□□ -2.26
LYSMD2Q8IV50 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.91□□□□□ -2.26
LYSMD2Q8IV50 MIR18A-201ENST00000362310 71 ntBASIC0.9□□□□□ -2.27
LYSMD2Q8IV50 BTF3P4-201ENST00000418852 495 ntBASIC0.9□□□□□ -2.27
LYSMD2Q8IV50 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.9□□□□□ -2.27
LYSMD2Q8IV50 MIR3678-201ENST00000578455 94 ntBASIC0.9□□□□□ -2.27
LYSMD2Q8IV50 SNORD115-24-201ENST00000363528 82 ntBASIC0.89□□□□□ -2.27
LYSMD2Q8IV50 RNU6-524P-201ENST00000384270 107 ntBASIC0.89□□□□□ -2.27
LYSMD2Q8IV50 MIR644A-201ENST00000385262 94 ntBASIC0.89□□□□□ -2.27
LYSMD2Q8IV50 RNU6-519P-201ENST00000410590 108 ntBASIC0.89□□□□□ -2.27
LYSMD2Q8IV50 RNA5SP170-201ENST00000517150 101 ntBASIC0.89□□□□□ -2.27
LYSMD2Q8IV50 SNORD114-21-201ENST00000606412 72 ntBASIC0.89□□□□□ -2.27
LYSMD2Q8IV50 Y_RNA.290-201ENST00000364879 114 ntBASIC0.88□□□□□ -2.27
LYSMD2Q8IV50 ACA64.5-201ENST00000516207 127 ntBASIC0.88□□□□□ -2.27
LYSMD2Q8IV50 RNU6-65P-201ENST00000516332 98 ntBASIC0.88□□□□□ -2.27
LYSMD2Q8IV50 Y_RNA.221-201ENST00000364248 96 ntBASIC0.87□□□□□ -2.27
LYSMD2Q8IV50 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
LYSMD2Q8IV50 MIR4536-1-201ENST00000583537 88 ntBASIC0.87□□□□□ -2.27
LYSMD2Q8IV50 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.87□□□□□ -2.27
LYSMD2Q8IV50 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
LYSMD2Q8IV50 SNORD28-201ENST00000384706 75 ntBASIC0.86□□□□□ -2.27
LYSMD2Q8IV50 RNA5SP432-201ENST00000362480 116 ntBASIC0.85□□□□□ -2.27
LYSMD2Q8IV50 RNU1-17P-201ENST00000363022 152 ntBASIC0.85□□□□□ -2.27
LYSMD2Q8IV50 SNORA7.1-201ENST00000363750 139 ntBASIC0.85□□□□□ -2.27
LYSMD2Q8IV50 SNORD115-44-201ENST00000365391 82 ntBASIC0.85□□□□□ -2.27
LYSMD2Q8IV50 Y_RNA.369-201ENST00000365568 117 ntBASIC0.85□□□□□ -2.27
LYSMD2Q8IV50 AL161932.1-201ENST00000437408 146 ntBASIC0.85□□□□□ -2.27
LYSMD2Q8IV50 AC067863.3-201ENST00000624172 122 ntBASIC0.85□□□□□ -2.27
LYSMD2Q8IV50 SNORD18A-201ENST00000363753 72 ntBASIC0.84□□□□□ -2.27
LYSMD2Q8IV50 Y_RNA.283-201ENST00000364798 112 ntBASIC0.84□□□□□ -2.27
LYSMD2Q8IV50 RNU6-1131P-201ENST00000364955 107 ntBASIC0.84□□□□□ -2.27
LYSMD2Q8IV50 SNORA36.2-201ENST00000384004 127 ntBASIC0.84□□□□□ -2.27
LYSMD2Q8IV50 SNORA17.3-201ENST00000391159 129 ntBASIC0.84□□□□□ -2.27
LYSMD2Q8IV50 AL353770.2-201ENST00000620024 78 ntBASIC0.84□□□□□ -2.27
LYSMD2Q8IV50 TRDV1-202ENST00000621643 102 ntBASIC0.84□□□□□ -2.27
LYSMD2Q8IV50 Y_RNA.4-201ENST00000362333 112 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 RNA5SP403-201ENST00000363598 108 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 Y_RNA.190-201ENST00000363964 101 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 MIR488-201ENST00000365739 83 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 SNORD116-22-201ENST00000384430 92 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 RNU4-62P-201ENST00000410125 130 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 snoU13.11-201ENST00000459219 104 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 RPL23AP94-201ENST00000512518 302 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 PSMC1P5-201ENST00000512850 177 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 RNU7-13P-201ENST00000516413 62 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 SCARNA16.5-201ENST00000517114 183 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 AC244669.1-204ENST00000621564 178 ntBASIC0.83□□□□□ -2.28
LYSMD2Q8IV50 RNU6-957P-201ENST00000363652 99 ntBASIC0.82□□□□□ -2.28
LYSMD2Q8IV50 RNU4-38P-201ENST00000364472 129 ntBASIC0.82□□□□□ -2.28
LYSMD2Q8IV50 MIR548L-201ENST00000408303 86 ntBASIC0.82□□□□□ -2.28
LYSMD2Q8IV50 Y_RNA.609-201ENST00000410669 89 ntBASIC0.82□□□□□ -2.28
LYSMD2Q8IV50 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.82□□□□□ -2.28
LYSMD2Q8IV50 RNU7-74P-201ENST00000459104 62 ntBASIC0.82□□□□□ -2.28
LYSMD2Q8IV50 RNU6-844P-201ENST00000517175 102 ntBASIC0.82□□□□□ -2.28
LYSMD2Q8IV50 RNA5SP47-201ENST00000517230 109 ntBASIC0.82□□□□□ -2.28
LYSMD2Q8IV50 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
LYSMD2Q8IV50 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
LYSMD2Q8IV50 MIR140-201ENST00000385282 100 ntBASIC0.81□□□□□ -2.28
LYSMD2Q8IV50 MIR548U-201ENST00000390728 81 ntBASIC0.81□□□□□ -2.28
LYSMD2Q8IV50 Y_RNA.596-201ENST00000410462 109 ntBASIC0.81□□□□□ -2.28
LYSMD2Q8IV50 RNU7-95P-201ENST00000459222 64 ntBASIC0.81□□□□□ -2.28
LYSMD2Q8IV50 RNU7-104P-201ENST00000459398 79 ntBASIC0.81□□□□□ -2.28
LYSMD2Q8IV50 AC026421.1-201ENST00000519101 163 ntBASIC0.81□□□□□ -2.28
LYSMD2Q8IV50 MIR5582-201ENST00000579697 68 ntBASIC0.81□□□□□ -2.28
LYSMD2Q8IV50 SNORD4B-201ENST00000459083 72 ntBASIC0.8□□□□□ -2.28
LYSMD2Q8IV50 RNU6-1265P-201ENST00000516342 103 ntBASIC0.8□□□□□ -2.28
LYSMD2Q8IV50 RNU6-548P-201ENST00000517083 115 ntBASIC0.8□□□□□ -2.28
LYSMD2Q8IV50 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
LYSMD2Q8IV50 RNU6-1298P-201ENST00000362456 101 ntBASIC0.79□□□□□ -2.28
LYSMD2Q8IV50 Y_RNA.43-201ENST00000362670 111 ntBASIC0.79□□□□□ -2.28
LYSMD2Q8IV50 RNU6-1134P-201ENST00000365156 101 ntBASIC0.79□□□□□ -2.28
LYSMD2Q8IV50 snoU13.26-201ENST00000459452 105 ntBASIC0.79□□□□□ -2.28
LYSMD2Q8IV50 RNA5SP94-201ENST00000516917 108 ntBASIC0.79□□□□□ -2.28
LYSMD2Q8IV50 RNU7-161P-201ENST00000517289 62 ntBASIC0.79□□□□□ -2.28
LYSMD2Q8IV50 RNU6-294P-201ENST00000364999 102 ntBASIC0.78□□□□□ -2.28
LYSMD2Q8IV50 RNY1P7-201ENST00000384743 110 ntBASIC0.78□□□□□ -2.28
LYSMD2Q8IV50 RNA5SP227-201ENST00000516184 113 ntBASIC0.78□□□□□ -2.28
LYSMD2Q8IV50 RNU6-1057P-201ENST00000517162 102 ntBASIC0.78□□□□□ -2.28
LYSMD2Q8IV50 AC006254.2-201ENST00000603259 279 ntBASIC0.78□□□□□ -2.28
LYSMD2Q8IV50 AL590095.2-201ENST00000604136 117 ntBASIC0.78□□□□□ -2.28
LYSMD2Q8IV50 AC092634.7-201ENST00000621022 103 ntBASIC0.78□□□□□ -2.28
LYSMD2Q8IV50 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
LYSMD2Q8IV50 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 1702.9 ms