Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CNKSR3Q6P9H4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CNKSR3Q6P9H4 ZNF209P-201ENST00000593450 2304 ntBASIC1.71□□□□□ -2.14
CNKSR3Q6P9H4 Y_RNA.224-201ENST00000364308 111 ntBASIC1.7□□□□□ -2.14
CNKSR3Q6P9H4 RNU6-686P-201ENST00000364839 107 ntBASIC1.7□□□□□ -2.14
CNKSR3Q6P9H4 RNU6-580P-201ENST00000365159 107 ntBASIC1.7□□□□□ -2.14
CNKSR3Q6P9H4 Y_RNA.545-201ENST00000384652 105 ntBASIC1.7□□□□□ -2.14
CNKSR3Q6P9H4 SUMO2P12-201ENST00000405924 140 ntBASIC1.7□□□□□ -2.14
CNKSR3Q6P9H4 RNU6-1108P-201ENST00000516308 104 ntBASIC1.7□□□□□ -2.14
CNKSR3Q6P9H4 RNU1-92P-201ENST00000517017 135 ntBASIC1.7□□□□□ -2.14
CNKSR3Q6P9H4 SNORA31.24-201ENST00000517232 57 ntBASIC1.7□□□□□ -2.14
CNKSR3Q6P9H4 MIR4421-201ENST00000578133 69 ntBASIC1.7□□□□□ -2.14
CNKSR3Q6P9H4 MIR4285-201ENST00000581001 85 ntBASIC1.7□□□□□ -2.14
CNKSR3Q6P9H4 MIR3064-201ENST00000581130 66 ntBASIC1.7□□□□□ -2.14
CNKSR3Q6P9H4 MIR6504-201ENST00000613520 61 ntBASIC1.7□□□□□ -2.14
CNKSR3Q6P9H4 MIR377-201ENST00000362145 69 ntBASIC1.69□□□□□ -2.14
CNKSR3Q6P9H4 RNA5SP264-201ENST00000363115 107 ntBASIC1.69□□□□□ -2.14
CNKSR3Q6P9H4 Y_RNA.532-201ENST00000384590 113 ntBASIC1.69□□□□□ -2.14
CNKSR3Q6P9H4 RNU6-243P-201ENST00000391140 107 ntBASIC1.69□□□□□ -2.14
CNKSR3Q6P9H4 SNORD90-201ENST00000391145 111 ntBASIC1.69□□□□□ -2.14
CNKSR3Q6P9H4 SNORD63B-201ENST00000411005 70 ntBASIC1.69□□□□□ -2.14
CNKSR3Q6P9H4 MIR3134-201ENST00000579433 74 ntBASIC1.69□□□□□ -2.14
CNKSR3Q6P9H4 AC104996.3-201ENST00000590718 94 ntBASIC1.69□□□□□ -2.14
CNKSR3Q6P9H4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
CNKSR3Q6P9H4 MIR103A2-201ENST00000362154 78 ntBASIC1.68□□□□□ -2.14
CNKSR3Q6P9H4 RNU6-957P-201ENST00000363652 99 ntBASIC1.68□□□□□ -2.14
CNKSR3Q6P9H4 RNU1-36P-201ENST00000365130 165 ntBASIC1.68□□□□□ -2.14
CNKSR3Q6P9H4 MIR1323-201ENST00000408090 73 ntBASIC1.68□□□□□ -2.14
CNKSR3Q6P9H4 snoU13.21-201ENST00000459368 105 ntBASIC1.68□□□□□ -2.14
CNKSR3Q6P9H4 RNU11-2P-201ENST00000516898 142 ntBASIC1.68□□□□□ -2.14
CNKSR3Q6P9H4 MIRLET7F1-201ENST00000362202 87 ntBASIC1.67□□□□□ -2.14
CNKSR3Q6P9H4 RNU4-58P-201ENST00000363192 141 ntBASIC1.67□□□□□ -2.14
CNKSR3Q6P9H4 SNORD48-201ENST00000364953 64 ntBASIC1.67□□□□□ -2.14
CNKSR3Q6P9H4 MIR489-201ENST00000384923 84 ntBASIC1.67□□□□□ -2.14
CNKSR3Q6P9H4 MIR520H-201ENST00000385126 88 ntBASIC1.67□□□□□ -2.14
CNKSR3Q6P9H4 SNORD93-201ENST00000408813 74 ntBASIC1.67□□□□□ -2.14
CNKSR3Q6P9H4 snoU13.18-201ENST00000459483 104 ntBASIC1.67□□□□□ -2.14
CNKSR3Q6P9H4 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.67□□□□□ -2.14
CNKSR3Q6P9H4 AL157834.3-201ENST00000615543 103 ntBASIC1.67□□□□□ -2.14
CNKSR3Q6P9H4 Y_RNA.491-201ENST00000384417 107 ntBASIC1.66□□□□□ -2.14
CNKSR3Q6P9H4 TRAJ51-201ENST00000504127 63 ntBASIC1.66□□□□□ -2.14
CNKSR3Q6P9H4 FGF7P7-201ENST00000514120 227 ntBASIC1.66□□□□□ -2.14
CNKSR3Q6P9H4 RNU6-1194P-201ENST00000516208 104 ntBASIC1.66□□□□□ -2.14
CNKSR3Q6P9H4 RNU6-902P-201ENST00000517212 91 ntBASIC1.66□□□□□ -2.14
CNKSR3Q6P9H4 RNU6-403P-201ENST00000363163 104 ntBASIC1.65□□□□□ -2.15
CNKSR3Q6P9H4 SNORD100-201ENST00000408573 76 ntBASIC1.65□□□□□ -2.15
CNKSR3Q6P9H4 MIR18B-201ENST00000454574 71 ntBASIC1.65□□□□□ -2.15
CNKSR3Q6P9H4 SNORD92-201ENST00000585078 85 ntBASIC1.65□□□□□ -2.15
CNKSR3Q6P9H4 AC013244.2-201ENST00000603396 103 ntBASIC1.65□□□□□ -2.15
CNKSR3Q6P9H4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CNKSR3Q6P9H4 MIR635-201ENST00000384830 98 ntBASIC1.64□□□□□ -2.15
CNKSR3Q6P9H4 RNU6-466P-201ENST00000391224 103 ntBASIC1.64□□□□□ -2.15
CNKSR3Q6P9H4 AL606490.4-201ENST00000423117 127 ntBASIC1.64□□□□□ -2.15
CNKSR3Q6P9H4 RNU7-195P-201ENST00000458793 62 ntBASIC1.64□□□□□ -2.15
CNKSR3Q6P9H4 RNU1-123P-201ENST00000458950 160 ntBASIC1.64□□□□□ -2.15
CNKSR3Q6P9H4 AC114801.3-201ENST00000510231 177 ntBASIC1.64□□□□□ -2.15
CNKSR3Q6P9H4 RNU6-165P-201ENST00000517170 99 ntBASIC1.64□□□□□ -2.15
CNKSR3Q6P9H4 RNU6-53P-201ENST00000365367 106 ntBASIC1.63□□□□□ -2.15
CNKSR3Q6P9H4 Y_RNA.660-201ENST00000516002 120 ntBASIC1.63□□□□□ -2.15
CNKSR3Q6P9H4 MIR3122-201ENST00000577243 73 ntBASIC1.63□□□□□ -2.15
CNKSR3Q6P9H4 MIR4484-201ENST00000582855 83 ntBASIC1.63□□□□□ -2.15
CNKSR3Q6P9H4 AL353770.2-201ENST00000620024 78 ntBASIC1.63□□□□□ -2.15
CNKSR3Q6P9H4 Y_RNA.536-201ENST00000384621 113 ntBASIC1.62□□□□□ -2.15
CNKSR3Q6P9H4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.62□□□□□ -2.15
CNKSR3Q6P9H4 MIR548U-201ENST00000390728 81 ntBASIC1.62□□□□□ -2.15
CNKSR3Q6P9H4 SNORD77.2-201ENST00000391045 68 ntBASIC1.62□□□□□ -2.15
CNKSR3Q6P9H4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CNKSR3Q6P9H4 RNU7-185P-201ENST00000459215 60 ntBASIC1.62□□□□□ -2.15
CNKSR3Q6P9H4 AC023934.1-201ENST00000574529 2389 ntBASIC1.61□□□□□ -2.15
CNKSR3Q6P9H4 Y_RNA.13-201ENST00000362403 112 ntBASIC1.61□□□□□ -2.15
CNKSR3Q6P9H4 SNORD83.1-201ENST00000411362 77 ntBASIC1.61□□□□□ -2.15
CNKSR3Q6P9H4 RPS27P16-201ENST00000425758 201 ntBASIC1.61□□□□□ -2.15
CNKSR3Q6P9H4 AL354695.1-201ENST00000427935 228 ntBASIC1.61□□□□□ -2.15
CNKSR3Q6P9H4 AC015818.7-201ENST00000428754 109 ntBASIC1.61□□□□□ -2.15
CNKSR3Q6P9H4 snoU13.17-201ENST00000458802 104 ntBASIC1.61□□□□□ -2.15
CNKSR3Q6P9H4 RNA5SP102-201ENST00000516865 106 ntBASIC1.61□□□□□ -2.15
CNKSR3Q6P9H4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.61□□□□□ -2.15
CNKSR3Q6P9H4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.61□□□□□ -2.15
CNKSR3Q6P9H4 RNU6-208P-201ENST00000362431 107 ntBASIC1.6□□□□□ -2.15
CNKSR3Q6P9H4 RNU6-1015P-201ENST00000517121 99 ntBASIC1.6□□□□□ -2.15
CNKSR3Q6P9H4 AL512310.8-201ENST00000550183 120 ntBASIC1.6□□□□□ -2.15
CNKSR3Q6P9H4 MIR3664-201ENST00000579074 99 ntBASIC1.6□□□□□ -2.15
CNKSR3Q6P9H4 MIR6082-201ENST00000613604 109 ntBASIC1.6□□□□□ -2.15
CNKSR3Q6P9H4 RNU6-411P-201ENST00000384451 107 ntBASIC1.59□□□□□ -2.15
CNKSR3Q6P9H4 MIR519A1-201ENST00000385257 85 ntBASIC1.59□□□□□ -2.15
CNKSR3Q6P9H4 RNU6-380P-201ENST00000410207 107 ntBASIC1.59□□□□□ -2.15
CNKSR3Q6P9H4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.59□□□□□ -2.15
CNKSR3Q6P9H4 AC092628.1-201ENST00000436250 252 ntBASIC1.59□□□□□ -2.15
CNKSR3Q6P9H4 RNU6-448P-201ENST00000517052 107 ntBASIC1.59□□□□□ -2.15
CNKSR3Q6P9H4 MIR4452-201ENST00000583004 71 ntBASIC1.59□□□□□ -2.15
CNKSR3Q6P9H4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.59□□□□□ -2.15
CNKSR3Q6P9H4 MIR664A-201ENST00000626086 82 ntBASIC1.59□□□□□ -2.15
CNKSR3Q6P9H4 MIR101-2-201ENST00000362195 79 ntBASIC1.58□□□□□ -2.16
CNKSR3Q6P9H4 Y_RNA.56-201ENST00000362798 112 ntBASIC1.58□□□□□ -2.16
CNKSR3Q6P9H4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.58□□□□□ -2.16
CNKSR3Q6P9H4 MIR1304-201ENST00000408243 91 ntBASIC1.58□□□□□ -2.16
CNKSR3Q6P9H4 AC074348.1-201ENST00000426503 132 ntBASIC1.58□□□□□ -2.16
CNKSR3Q6P9H4 Y_RNA.809-201ENST00000516058 95 ntBASIC1.58□□□□□ -2.16
CNKSR3Q6P9H4 MIR548H5-201ENST00000580314 60 ntBASIC1.58□□□□□ -2.16
CNKSR3Q6P9H4 TRDV1-202ENST00000621643 102 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms