Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 Y_RNA.261-201ENST00000364631 102 ntBASIC0.54□□□□□ -2.32
PPP4R4Q6NUP7 Y_RNA.563-201ENST00000384707 108 ntBASIC0.54□□□□□ -2.32
PPP4R4Q6NUP7 MIR519A1-201ENST00000385257 85 ntBASIC0.54□□□□□ -2.32
PPP4R4Q6NUP7 RNU6-816P-201ENST00000390914 107 ntBASIC0.54□□□□□ -2.32
PPP4R4Q6NUP7 RNU6-1268P-201ENST00000391214 107 ntBASIC0.54□□□□□ -2.32
PPP4R4Q6NUP7 RNU6-1239P-201ENST00000391310 107 ntBASIC0.54□□□□□ -2.32
PPP4R4Q6NUP7 RNU7-161P-201ENST00000517289 62 ntBASIC0.54□□□□□ -2.32
PPP4R4Q6NUP7 SNORD115-24-201ENST00000363528 82 ntBASIC0.53□□□□□ -2.32
PPP4R4Q6NUP7 RNU6-1229P-201ENST00000364295 107 ntBASIC0.53□□□□□ -2.32
PPP4R4Q6NUP7 MIR635-201ENST00000384830 98 ntBASIC0.53□□□□□ -2.32
PPP4R4Q6NUP7 RPL39P34-201ENST00000477141 156 ntBASIC0.53□□□□□ -2.32
PPP4R4Q6NUP7 RNU6-1018P-201ENST00000516577 106 ntBASIC0.53□□□□□ -2.32
PPP4R4Q6NUP7 RNU6-850P-201ENST00000516934 103 ntBASIC0.53□□□□□ -2.32
PPP4R4Q6NUP7 RNU7-10P-201ENST00000607194 63 ntBASIC0.53□□□□□ -2.32
PPP4R4Q6NUP7 Y_RNA.49-201ENST00000362714 112 ntBASIC0.52□□□□□ -2.33
PPP4R4Q6NUP7 RNU6-170P-201ENST00000362832 104 ntBASIC0.52□□□□□ -2.33
PPP4R4Q6NUP7 SNORD44.1-201ENST00000363202 61 ntBASIC0.52□□□□□ -2.33
PPP4R4Q6NUP7 RNU6-409P-201ENST00000384114 104 ntBASIC0.52□□□□□ -2.33
PPP4R4Q6NUP7 RNU6-1201P-201ENST00000384227 107 ntBASIC0.52□□□□□ -2.33
PPP4R4Q6NUP7 MIR193B-201ENST00000384907 83 ntBASIC0.52□□□□□ -2.33
PPP4R4Q6NUP7 MIR548A1-201ENST00000385041 97 ntBASIC0.52□□□□□ -2.33
PPP4R4Q6NUP7 MIR936-201ENST00000401264 98 ntBASIC0.52□□□□□ -2.33
PPP4R4Q6NUP7 SNORD63B-201ENST00000411005 70 ntBASIC0.52□□□□□ -2.33
PPP4R4Q6NUP7 AC097635.1-201ENST00000450678 155 ntBASIC0.52□□□□□ -2.33
PPP4R4Q6NUP7 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
PPP4R4Q6NUP7 MIR3910-1-201ENST00000580936 111 ntBASIC0.52□□□□□ -2.33
PPP4R4Q6NUP7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.52□□□□□ -2.33
PPP4R4Q6NUP7 MIR5087-201ENST00000635826 76 ntBASIC0.52□□□□□ -2.33
PPP4R4Q6NUP7 AC010487.4-201ENST00000637027 61 ntBASIC0.52□□□□□ -2.33
PPP4R4Q6NUP7 MIR103A1-201ENST00000362165 78 ntBASIC0.51□□□□□ -2.33
PPP4R4Q6NUP7 RNA5SP403-201ENST00000363598 108 ntBASIC0.51□□□□□ -2.33
PPP4R4Q6NUP7 Y_RNA.155-201ENST00000363632 101 ntBASIC0.51□□□□□ -2.33
PPP4R4Q6NUP7 Y_RNA.507-201ENST00000384500 99 ntBASIC0.51□□□□□ -2.33
PPP4R4Q6NUP7 AL603908.1-201ENST00000406098 201 ntBASIC0.51□□□□□ -2.33
PPP4R4Q6NUP7 RNU7-106P-201ENST00000459514 67 ntBASIC0.51□□□□□ -2.33
PPP4R4Q6NUP7 AL365222.1-201ENST00000614661 98 ntBASIC0.51□□□□□ -2.33
PPP4R4Q6NUP7 AL512310.12-203ENST00000640543 90 ntBASIC0.51□□□□□ -2.33
PPP4R4Q6NUP7 Y_RNA.35-201ENST00000362601 101 ntBASIC0.5□□□□□ -2.33
PPP4R4Q6NUP7 MIR599-201ENST00000385069 95 ntBASIC0.5□□□□□ -2.33
PPP4R4Q6NUP7 SNORD71-201ENST00000411292 86 ntBASIC0.5□□□□□ -2.33
PPP4R4Q6NUP7 RNU7-195P-201ENST00000458793 62 ntBASIC0.5□□□□□ -2.33
PPP4R4Q6NUP7 MIR1273G-201ENST00000577677 100 ntBASIC0.5□□□□□ -2.33
PPP4R4Q6NUP7 AC091304.10-201ENST00000641554 121 ntBASIC0.5□□□□□ -2.33
PPP4R4Q6NUP7 MIR1912-201ENST00000410389 80 ntBASIC0.49□□□□□ -2.33
PPP4R4Q6NUP7 RNA5SP227-201ENST00000516184 113 ntBASIC0.49□□□□□ -2.33
PPP4R4Q6NUP7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.49□□□□□ -2.33
PPP4R4Q6NUP7 AC090625.1-201ENST00000357130 210 ntBASIC0.48□□□□□ -2.33
PPP4R4Q6NUP7 SNORD38.1-201ENST00000363863 68 ntBASIC0.48□□□□□ -2.33
PPP4R4Q6NUP7 MIR577-201ENST00000385196 96 ntBASIC0.48□□□□□ -2.33
PPP4R4Q6NUP7 MIR548A3-201ENST00000385297 97 ntBASIC0.48□□□□□ -2.33
PPP4R4Q6NUP7 AC243829.3-201ENST00000622177 108 ntBASIC0.48□□□□□ -2.33
PPP4R4Q6NUP7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.48□□□□□ -2.33
PPP4R4Q6NUP7 RNU6-726P-201ENST00000364680 107 ntBASIC0.47□□□□□ -2.33
PPP4R4Q6NUP7 Y_RNA.377-201ENST00000365644 108 ntBASIC0.47□□□□□ -2.33
PPP4R4Q6NUP7 AC069271.1-201ENST00000445577 156 ntBASIC0.47□□□□□ -2.33
PPP4R4Q6NUP7 AL670379.3-201ENST00000605040 251 ntBASIC0.47□□□□□ -2.33
PPP4R4Q6NUP7 RNU6-1260P-201ENST00000362944 107 ntBASIC0.46□□□□□ -2.34
PPP4R4Q6NUP7 RNA5SP325-201ENST00000363756 130 ntBASIC0.46□□□□□ -2.34
PPP4R4Q6NUP7 Y_RNA.173-201ENST00000363776 113 ntBASIC0.46□□□□□ -2.34
PPP4R4Q6NUP7 Y_RNA.309-201ENST00000365046 111 ntBASIC0.46□□□□□ -2.34
PPP4R4Q6NUP7 Y_RNA.342-201ENST00000365352 113 ntBASIC0.46□□□□□ -2.34
PPP4R4Q6NUP7 RNU6-1126P-201ENST00000384002 107 ntBASIC0.46□□□□□ -2.34
PPP4R4Q6NUP7 SNORD38.2-201ENST00000384470 69 ntBASIC0.46□□□□□ -2.34
PPP4R4Q6NUP7 MIR548G-201ENST00000408442 89 ntBASIC0.46□□□□□ -2.34
PPP4R4Q6NUP7 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
PPP4R4Q6NUP7 AC008267.6-201ENST00000441664 139 ntBASIC0.46□□□□□ -2.34
PPP4R4Q6NUP7 AC068339.1-201ENST00000526965 141 ntBASIC0.46□□□□□ -2.34
PPP4R4Q6NUP7 MIR4711-201ENST00000578274 70 ntBASIC0.46□□□□□ -2.34
PPP4R4Q6NUP7 RNU1-29P-201ENST00000606574 126 ntBASIC0.46□□□□□ -2.34
PPP4R4Q6NUP7 AL442128.1-201ENST00000615151 90 ntBASIC0.46□□□□□ -2.34
PPP4R4Q6NUP7 Y_RNA.221-201ENST00000364248 96 ntBASIC0.45□□□□□ -2.34
PPP4R4Q6NUP7 U8.6-201ENST00000364939 135 ntBASIC0.45□□□□□ -2.34
PPP4R4Q6NUP7 MIR516A2-201ENST00000384888 90 ntBASIC0.45□□□□□ -2.34
PPP4R4Q6NUP7 MIR516A1-201ENST00000385033 90 ntBASIC0.45□□□□□ -2.34
PPP4R4Q6NUP7 Y_RNA.809-201ENST00000516058 95 ntBASIC0.45□□□□□ -2.34
PPP4R4Q6NUP7 MTND5P40-201ENST00000559945 246 ntBASIC0.45□□□□□ -2.34
PPP4R4Q6NUP7 MIR6755-201ENST00000619993 66 ntBASIC0.45□□□□□ -2.34
PPP4R4Q6NUP7 MIR924-201ENST00000638017 53 ntBASIC0.45□□□□□ -2.34
PPP4R4Q6NUP7 SNORD113-1-201ENST00000365321 69 ntBASIC0.44□□□□□ -2.34
PPP4R4Q6NUP7 RNU6-716P-201ENST00000365621 103 ntBASIC0.44□□□□□ -2.34
PPP4R4Q6NUP7 RNU2-59P-201ENST00000410482 191 ntBASIC0.44□□□□□ -2.34
PPP4R4Q6NUP7 RNU7-104P-201ENST00000459398 79 ntBASIC0.44□□□□□ -2.34
PPP4R4Q6NUP7 RNU6-863P-201ENST00000515989 104 ntBASIC0.44□□□□□ -2.34
PPP4R4Q6NUP7 MIR4694-201ENST00000578534 80 ntBASIC0.44□□□□□ -2.34
PPP4R4Q6NUP7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.44□□□□□ -2.34
PPP4R4Q6NUP7 RNA5SP499-201ENST00000363982 119 ntBASIC0.43□□□□□ -2.34
PPP4R4Q6NUP7 Y_RNA.281-201ENST00000364774 94 ntBASIC0.43□□□□□ -2.34
PPP4R4Q6NUP7 RNA5SP193-201ENST00000410353 107 ntBASIC0.43□□□□□ -2.34
PPP4R4Q6NUP7 SPINT5P-201ENST00000448174 155 ntBASIC0.43□□□□□ -2.34
PPP4R4Q6NUP7 AC108740.1-201ENST00000498629 225 ntBASIC0.43□□□□□ -2.34
PPP4R4Q6NUP7 RNU6-1265P-201ENST00000516342 103 ntBASIC0.43□□□□□ -2.34
PPP4R4Q6NUP7 MIR3613-201ENST00000579844 87 ntBASIC0.43□□□□□ -2.34
PPP4R4Q6NUP7 AC132825.6-201ENST00000638861 357 ntBASIC0.43□□□□□ -2.34
PPP4R4Q6NUP7 RNU6-1327P-201ENST00000365302 105 ntBASIC0.42□□□□□ -2.34
PPP4R4Q6NUP7 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
PPP4R4Q6NUP7 RNU6-22P-201ENST00000384355 107 ntBASIC0.42□□□□□ -2.34
PPP4R4Q6NUP7 SNORD41.1-201ENST00000391000 69 ntBASIC0.42□□□□□ -2.34
PPP4R4Q6NUP7 RNU6-90P-201ENST00000606352 106 ntBASIC0.42□□□□□ -2.34
PPP4R4Q6NUP7 AC243829.6-201ENST00000612652 106 ntBASIC0.42□□□□□ -2.34
PPP4R4Q6NUP7 AL162376.1-201ENST00000624117 175 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 194.4 ms