Protein–RNA interactions for Protein: Q5VIR6

VPS53, Vacuolar protein sorting-associated protein 53 homolog, humanhuman

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53Q5VIR6 MIR2052-201ENST00000636055 55 ntBASIC1.01□□□□□ -2.25
VPS53Q5VIR6 MIR101-2-201ENST00000362195 79 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 Y_RNA.56-201ENST00000362798 112 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 Y_RNA.567-201ENST00000384736 106 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 AC109327.2-201ENST00000448339 378 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 RNU6-351P-201ENST00000516097 100 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 MIR4777-201ENST00000583710 86 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 RNU7-10P-201ENST00000607194 63 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 MIR6857-201ENST00000613267 93 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 AC012531.4-201ENST00000616509 177 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 AC091304.10-201ENST00000641554 121 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 MIR520H-201ENST00000385126 88 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 SNORD100-201ENST00000408573 76 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 RNA5SP89-201ENST00000410300 108 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 BX276092.1-201ENST00000427368 251 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 ACA64.5-201ENST00000516207 127 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 RNU6-795P-201ENST00000516323 103 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 SNORA40.13-201ENST00000516379 120 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 Y_RNA.697-201ENST00000516776 113 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 RNU6-850P-201ENST00000516934 103 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 RNU6-448P-201ENST00000517052 107 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 MIR548H5-201ENST00000580314 60 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
VPS53Q5VIR6 RNU6-1244P-201ENST00000363614 108 ntBASIC0.98□□□□□ -2.25
VPS53Q5VIR6 SNORD114-2-201ENST00000363953 78 ntBASIC0.98□□□□□ -2.25
VPS53Q5VIR6 Y_RNA.348-201ENST00000365403 103 ntBASIC0.98□□□□□ -2.25
VPS53Q5VIR6 Y_RNA.536-201ENST00000384621 113 ntBASIC0.98□□□□□ -2.25
VPS53Q5VIR6 RNU6-813P-201ENST00000384691 107 ntBASIC0.98□□□□□ -2.25
VPS53Q5VIR6 MIR608-201ENST00000384820 100 ntBASIC0.98□□□□□ -2.25
VPS53Q5VIR6 MTATP8P2-201ENST00000435212 202 ntBASIC0.98□□□□□ -2.25
VPS53Q5VIR6 Y_RNA.677-201ENST00000516401 85 ntBASIC0.98□□□□□ -2.25
VPS53Q5VIR6 Y_RNA.342-201ENST00000365352 113 ntBASIC0.97□□□□□ -2.25
VPS53Q5VIR6 Y_RNA.705-201ENST00000516862 110 ntBASIC0.97□□□□□ -2.25
VPS53Q5VIR6 RNU6-1125P-201ENST00000363601 107 ntBASIC0.96□□□□□ -2.26
VPS53Q5VIR6 RNU6-480P-201ENST00000384332 107 ntBASIC0.96□□□□□ -2.26
VPS53Q5VIR6 RNU6-291P-201ENST00000384720 107 ntBASIC0.96□□□□□ -2.26
VPS53Q5VIR6 MIR519A1-201ENST00000385257 85 ntBASIC0.96□□□□□ -2.26
VPS53Q5VIR6 MIR548Z-201ENST00000584743 97 ntBASIC0.96□□□□□ -2.26
VPS53Q5VIR6 MIR6734-201ENST00000621166 68 ntBASIC0.96□□□□□ -2.26
VPS53Q5VIR6 Y_RNA.174-201ENST00000363781 105 ntBASIC0.95□□□□□ -2.26
VPS53Q5VIR6 RNU6-1335P-201ENST00000365426 107 ntBASIC0.95□□□□□ -2.26
VPS53Q5VIR6 Y_RNA.467-201ENST00000384297 102 ntBASIC0.95□□□□□ -2.26
VPS53Q5VIR6 RNU6-535P-201ENST00000384722 107 ntBASIC0.95□□□□□ -2.26
VPS53Q5VIR6 MIR635-201ENST00000384830 98 ntBASIC0.95□□□□□ -2.26
VPS53Q5VIR6 RNU6-972P-201ENST00000391208 107 ntBASIC0.95□□□□□ -2.26
VPS53Q5VIR6 RNU6-86P-201ENST00000606534 107 ntBASIC0.95□□□□□ -2.26
VPS53Q5VIR6 Y_RNA.57-201ENST00000362806 113 ntBASIC0.94□□□□□ -2.26
VPS53Q5VIR6 RNU6-640P-201ENST00000363693 105 ntBASIC0.94□□□□□ -2.26
VPS53Q5VIR6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
VPS53Q5VIR6 RNU6-905P-201ENST00000384434 107 ntBASIC0.94□□□□□ -2.26
VPS53Q5VIR6 MIR573-201ENST00000384964 99 ntBASIC0.94□□□□□ -2.26
VPS53Q5VIR6 AC092628.1-201ENST00000436250 252 ntBASIC0.94□□□□□ -2.26
VPS53Q5VIR6 AC002350.1-201ENST00000490759 375 ntBASIC0.94□□□□□ -2.26
VPS53Q5VIR6 PSMC1P5-201ENST00000512850 177 ntBASIC0.94□□□□□ -2.26
VPS53Q5VIR6 RNU6-644P-201ENST00000391155 98 ntBASIC0.93□□□□□ -2.26
VPS53Q5VIR6 RNU6-887P-201ENST00000410660 100 ntBASIC0.93□□□□□ -2.26
VPS53Q5VIR6 SNORD63B-201ENST00000411005 70 ntBASIC0.93□□□□□ -2.26
VPS53Q5VIR6 AC138907.6-201ENST00000568401 126 ntBASIC0.93□□□□□ -2.26
VPS53Q5VIR6 AC138869.1-201ENST00000568623 124 ntBASIC0.93□□□□□ -2.26
VPS53Q5VIR6 MIR4653-201ENST00000585107 83 ntBASIC0.93□□□□□ -2.26
VPS53Q5VIR6 uc_338.16-201ENST00000621804 95 ntBASIC0.93□□□□□ -2.26
VPS53Q5VIR6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.93□□□□□ -2.26
VPS53Q5VIR6 TRAJ51-201ENST00000504127 63 ntBASIC0.92□□□□□ -2.26
VPS53Q5VIR6 RNU7-61P-201ENST00000515897 61 ntBASIC0.92□□□□□ -2.26
VPS53Q5VIR6 RNA5SP220-201ENST00000516298 104 ntBASIC0.92□□□□□ -2.26
VPS53Q5VIR6 Y_RNA.694-201ENST00000516677 117 ntBASIC0.92□□□□□ -2.26
VPS53Q5VIR6 AL353765.1-201ENST00000605514 183 ntBASIC0.92□□□□□ -2.26
VPS53Q5VIR6 MIR6866-201ENST00000638146 69 ntBASIC0.92□□□□□ -2.26
VPS53Q5VIR6 MIR146A-201ENST00000385201 99 ntBASIC0.91□□□□□ -2.26
VPS53Q5VIR6 SNORD99-201ENST00000408612 74 ntBASIC0.91□□□□□ -2.26
VPS53Q5VIR6 MIR548J-201ENST00000408833 112 ntBASIC0.91□□□□□ -2.26
VPS53Q5VIR6 AC097635.1-201ENST00000450678 155 ntBASIC0.91□□□□□ -2.26
VPS53Q5VIR6 AC244505.6-201ENST00000452829 130 ntBASIC0.91□□□□□ -2.26
VPS53Q5VIR6 MIR151B-201ENST00000584249 96 ntBASIC0.91□□□□□ -2.26
VPS53Q5VIR6 AC103810.7-201ENST00000607821 91 ntBASIC0.91□□□□□ -2.26
VPS53Q5VIR6 Y_RNA.32-201ENST00000362589 110 ntBASIC0.9□□□□□ -2.27
VPS53Q5VIR6 RNA5SP117-201ENST00000365294 118 ntBASIC0.9□□□□□ -2.27
VPS53Q5VIR6 MIR181B2-201ENST00000385004 89 ntBASIC0.9□□□□□ -2.27
VPS53Q5VIR6 RNU6-1254P-201ENST00000391266 104 ntBASIC0.9□□□□□ -2.27
VPS53Q5VIR6 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.9□□□□□ -2.27
VPS53Q5VIR6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.9□□□□□ -2.27
VPS53Q5VIR6 RNU6-1260P-201ENST00000362944 107 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 MIR516A2-201ENST00000384888 90 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 MIR516A1-201ENST00000385033 90 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 AC244098.3-201ENST00000424803 96 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 RNU7-106P-201ENST00000459514 67 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 SNORA31.14-201ENST00000516728 116 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 RNU6-135P-201ENST00000516769 101 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.89□□□□□ -2.27
VPS53Q5VIR6 CYP3A137P-201ENST00000562436 69 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 MIR3612-201ENST00000579753 87 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 MIR6788-201ENST00000618842 66 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 SNORD36A-201ENST00000362874 73 ntBASIC0.88□□□□□ -2.27
VPS53Q5VIR6 SNORD116-10-201ENST00000363791 102 ntBASIC0.88□□□□□ -2.27
VPS53Q5VIR6 RNA5SP245-201ENST00000364239 121 ntBASIC0.88□□□□□ -2.27
VPS53Q5VIR6 RNU4-45P-201ENST00000365469 141 ntBASIC0.88□□□□□ -2.27
VPS53Q5VIR6 SNORD58A-201ENST00000383875 65 ntBASIC0.88□□□□□ -2.27
VPS53Q5VIR6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.88□□□□□ -2.27
VPS53Q5VIR6 AL513043.2-201ENST00000573941 143 ntBASIC0.88□□□□□ -2.27
VPS53Q5VIR6 U7.3-201ENST00000616123 62 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 300.7 ms