Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AL031737.1-201ENST00000450125 223 ntBASIC0.94□□□□□ -2.26
LONRF3Q496Y0 RNU6-351P-201ENST00000516097 100 ntBASIC0.94□□□□□ -2.26
LONRF3Q496Y0 RNU6-904P-201ENST00000516206 101 ntBASIC0.94□□□□□ -2.26
LONRF3Q496Y0 RNU6-90P-201ENST00000606352 106 ntBASIC0.94□□□□□ -2.26
LONRF3Q496Y0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
LONRF3Q496Y0 RNU6-756P-201ENST00000383997 107 ntBASIC0.93□□□□□ -2.26
LONRF3Q496Y0 RNU6-1113P-201ENST00000384348 107 ntBASIC0.93□□□□□ -2.26
LONRF3Q496Y0 RNU6-291P-201ENST00000384720 107 ntBASIC0.93□□□□□ -2.26
LONRF3Q496Y0 RNU6-535P-201ENST00000384722 107 ntBASIC0.93□□□□□ -2.26
LONRF3Q496Y0 SNRPGP12-201ENST00000449481 213 ntBASIC0.93□□□□□ -2.26
LONRF3Q496Y0 Y_RNA.659-201ENST00000515994 113 ntBASIC0.93□□□□□ -2.26
LONRF3Q496Y0 MIR5000-201ENST00000577717 103 ntBASIC0.93□□□□□ -2.26
LONRF3Q496Y0 MIR450A1-201ENST00000362262 91 ntBASIC0.92□□□□□ -2.26
LONRF3Q496Y0 Y_RNA.10-201ENST00000362371 110 ntBASIC0.92□□□□□ -2.26
LONRF3Q496Y0 Y_RNA.56-201ENST00000362798 112 ntBASIC0.92□□□□□ -2.26
LONRF3Q496Y0 Y_RNA.81-201ENST00000362997 102 ntBASIC0.92□□□□□ -2.26
LONRF3Q496Y0 SNORD114-2-201ENST00000363953 78 ntBASIC0.92□□□□□ -2.26
LONRF3Q496Y0 RNU6-571P-201ENST00000384128 107 ntBASIC0.92□□□□□ -2.26
LONRF3Q496Y0 MIR146A-201ENST00000385201 99 ntBASIC0.92□□□□□ -2.26
LONRF3Q496Y0 Y_RNA.601-201ENST00000410500 113 ntBASIC0.92□□□□□ -2.26
LONRF3Q496Y0 AC244098.3-201ENST00000424803 96 ntBASIC0.92□□□□□ -2.26
LONRF3Q496Y0 AC002350.1-201ENST00000490759 375 ntBASIC0.92□□□□□ -2.26
LONRF3Q496Y0 PVT1_3.1-201ENST00000620853 95 ntBASIC0.92□□□□□ -2.26
LONRF3Q496Y0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
LONRF3Q496Y0 RNU6-766P-201ENST00000362478 107 ntBASIC0.91□□□□□ -2.26
LONRF3Q496Y0 MIR590-201ENST00000385008 97 ntBASIC0.91□□□□□ -2.26
LONRF3Q496Y0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
LONRF3Q496Y0 RNA5SP222-201ENST00000411039 105 ntBASIC0.91□□□□□ -2.26
LONRF3Q496Y0 RNU6-850P-201ENST00000516934 103 ntBASIC0.91□□□□□ -2.26
LONRF3Q496Y0 MIR548H5-201ENST00000580314 60 ntBASIC0.91□□□□□ -2.26
LONRF3Q496Y0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.91□□□□□ -2.26
LONRF3Q496Y0 Y_RNA.173-201ENST00000363776 113 ntBASIC0.9□□□□□ -2.27
LONRF3Q496Y0 SNORD45B-201ENST00000364617 72 ntBASIC0.9□□□□□ -2.27
LONRF3Q496Y0 AC004941.2-201ENST00000427009 228 ntBASIC0.9□□□□□ -2.27
LONRF3Q496Y0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.9□□□□□ -2.27
LONRF3Q496Y0 SCARNA23-201ENST00000516060 130 ntBASIC0.9□□□□□ -2.27
LONRF3Q496Y0 RNU6-537P-201ENST00000517277 103 ntBASIC0.9□□□□□ -2.27
LONRF3Q496Y0 MIR3612-201ENST00000579753 87 ntBASIC0.9□□□□□ -2.27
LONRF3Q496Y0 uc_338.16-201ENST00000621804 95 ntBASIC0.9□□□□□ -2.27
LONRF3Q496Y0 AC091304.10-201ENST00000641554 121 ntBASIC0.9□□□□□ -2.27
LONRF3Q496Y0 Y_RNA.32-201ENST00000362589 110 ntBASIC0.89□□□□□ -2.27
LONRF3Q496Y0 RNU6-1163P-201ENST00000364516 107 ntBASIC0.89□□□□□ -2.27
LONRF3Q496Y0 RNA5SP117-201ENST00000365294 118 ntBASIC0.89□□□□□ -2.27
LONRF3Q496Y0 MIR635-201ENST00000384830 98 ntBASIC0.89□□□□□ -2.27
LONRF3Q496Y0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.89□□□□□ -2.27
LONRF3Q496Y0 AC109327.2-201ENST00000448339 378 ntBASIC0.89□□□□□ -2.27
LONRF3Q496Y0 SNORA31.14-201ENST00000516728 116 ntBASIC0.89□□□□□ -2.27
LONRF3Q496Y0 MIR4714-201ENST00000580728 77 ntBASIC0.89□□□□□ -2.27
LONRF3Q496Y0 RNU7-10P-201ENST00000607194 63 ntBASIC0.89□□□□□ -2.27
LONRF3Q496Y0 RNU6-170P-201ENST00000362832 104 ntBASIC0.88□□□□□ -2.27
LONRF3Q496Y0 RNA5SP245-201ENST00000364239 121 ntBASIC0.88□□□□□ -2.27
LONRF3Q496Y0 RNU6-147P-201ENST00000383983 107 ntBASIC0.88□□□□□ -2.27
LONRF3Q496Y0 SNORA36.2-201ENST00000384004 127 ntBASIC0.88□□□□□ -2.27
LONRF3Q496Y0 Y_RNA.567-201ENST00000384736 106 ntBASIC0.88□□□□□ -2.27
LONRF3Q496Y0 MIR598-201ENST00000384868 97 ntBASIC0.88□□□□□ -2.27
LONRF3Q496Y0 AC092628.1-201ENST00000436250 252 ntBASIC0.88□□□□□ -2.27
LONRF3Q496Y0 RNU6-795P-201ENST00000516323 103 ntBASIC0.88□□□□□ -2.27
LONRF3Q496Y0 RNU6-109P-201ENST00000516364 107 ntBASIC0.88□□□□□ -2.27
LONRF3Q496Y0 RNU6-184P-201ENST00000516514 107 ntBASIC0.88□□□□□ -2.27
LONRF3Q496Y0 Y_RNA.95-201ENST00000363079 95 ntBASIC0.87□□□□□ -2.27
LONRF3Q496Y0 Y_RNA.174-201ENST00000363781 105 ntBASIC0.87□□□□□ -2.27
LONRF3Q496Y0 Y_RNA.342-201ENST00000365352 113 ntBASIC0.87□□□□□ -2.27
LONRF3Q496Y0 TRAJ51-201ENST00000504127 63 ntBASIC0.87□□□□□ -2.27
LONRF3Q496Y0 AC012531.4-201ENST00000616509 177 ntBASIC0.87□□□□□ -2.27
LONRF3Q496Y0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.86□□□□□ -2.27
LONRF3Q496Y0 SNORD63B-201ENST00000411005 70 ntBASIC0.86□□□□□ -2.27
LONRF3Q496Y0 MIR4439-201ENST00000583746 80 ntBASIC0.86□□□□□ -2.27
LONRF3Q496Y0 MIR548Z-201ENST00000584743 97 ntBASIC0.86□□□□□ -2.27
LONRF3Q496Y0 RNU6-86P-201ENST00000606534 107 ntBASIC0.86□□□□□ -2.27
LONRF3Q496Y0 Y_RNA.818-201ENST00000618813 71 ntBASIC0.86□□□□□ -2.27
LONRF3Q496Y0 RNU6-153P-201ENST00000364422 104 ntBASIC0.85□□□□□ -2.27
LONRF3Q496Y0 Y_RNA.466-201ENST00000384294 113 ntBASIC0.85□□□□□ -2.27
LONRF3Q496Y0 AC138907.6-201ENST00000568401 126 ntBASIC0.85□□□□□ -2.27
LONRF3Q496Y0 AC138869.1-201ENST00000568623 124 ntBASIC0.85□□□□□ -2.27
LONRF3Q496Y0 MIR4777-201ENST00000583710 86 ntBASIC0.85□□□□□ -2.27
LONRF3Q496Y0 MIR18A-201ENST00000362310 71 ntBASIC0.84□□□□□ -2.27
LONRF3Q496Y0 Y_RNA.57-201ENST00000362806 113 ntBASIC0.84□□□□□ -2.27
LONRF3Q496Y0 RNU6-1244P-201ENST00000363614 108 ntBASIC0.84□□□□□ -2.27
LONRF3Q496Y0 Y_RNA.467-201ENST00000384297 102 ntBASIC0.84□□□□□ -2.27
LONRF3Q496Y0 MIR516A2-201ENST00000384888 90 ntBASIC0.84□□□□□ -2.27
LONRF3Q496Y0 MIR516A1-201ENST00000385033 90 ntBASIC0.84□□□□□ -2.27
LONRF3Q496Y0 MIR644A-201ENST00000385262 94 ntBASIC0.84□□□□□ -2.27
LONRF3Q496Y0 RNU7-106P-201ENST00000459514 67 ntBASIC0.84□□□□□ -2.27
LONRF3Q496Y0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.84□□□□□ -2.27
LONRF3Q496Y0 MIR6835-201ENST00000621552 64 ntBASIC0.84□□□□□ -2.27
LONRF3Q496Y0 Y_RNA.544-201ENST00000384650 113 ntBASIC0.83□□□□□ -2.28
LONRF3Q496Y0 MIR508-201ENST00000384857 115 ntBASIC0.83□□□□□ -2.28
LONRF3Q496Y0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
LONRF3Q496Y0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
LONRF3Q496Y0 Y_RNA.107-201ENST00000363190 121 ntBASIC0.82□□□□□ -2.28
LONRF3Q496Y0 RNU6-1125P-201ENST00000363601 107 ntBASIC0.82□□□□□ -2.28
LONRF3Q496Y0 RNU6-32P-201ENST00000383948 107 ntBASIC0.82□□□□□ -2.28
LONRF3Q496Y0 RNU6-13P-201ENST00000384248 107 ntBASIC0.82□□□□□ -2.28
LONRF3Q496Y0 RNU6-480P-201ENST00000384332 107 ntBASIC0.82□□□□□ -2.28
LONRF3Q496Y0 RNU6-12P-201ENST00000384604 107 ntBASIC0.82□□□□□ -2.28
LONRF3Q496Y0 RNU6-813P-201ENST00000384691 107 ntBASIC0.82□□□□□ -2.28
LONRF3Q496Y0 RNU6-41P-201ENST00000384741 107 ntBASIC0.82□□□□□ -2.28
LONRF3Q496Y0 MIR519A1-201ENST00000385257 85 ntBASIC0.82□□□□□ -2.28
LONRF3Q496Y0 RNU7-195P-201ENST00000458793 62 ntBASIC0.82□□□□□ -2.28
LONRF3Q496Y0 RNU6-469P-201ENST00000516253 101 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 821.1 ms