Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 RNU6-521P-201ENST00000516663 105 ntBASIC0.2□□□□□ -2.38
CSTF1Q05048 RNU6-1006P-201ENST00000516998 103 ntBASIC0.2□□□□□ -2.38
CSTF1Q05048 SCARNA16.5-201ENST00000517114 183 ntBASIC0.2□□□□□ -2.38
CSTF1Q05048 MIR5589-201ENST00000579442 60 ntBASIC0.2□□□□□ -2.38
CSTF1Q05048 MIR4802-201ENST00000581881 80 ntBASIC0.2□□□□□ -2.38
CSTF1Q05048 AL035470.1-201ENST00000622571 220 ntBASIC0.2□□□□□ -2.38
CSTF1Q05048 Y_RNA.49-201ENST00000362714 112 ntBASIC0.19□□□□□ -2.38
CSTF1Q05048 SNORD115-24-201ENST00000363528 82 ntBASIC0.19□□□□□ -2.38
CSTF1Q05048 Y_RNA.174-201ENST00000363781 105 ntBASIC0.19□□□□□ -2.38
CSTF1Q05048 Y_RNA.198-201ENST00000364013 98 ntBASIC0.19□□□□□ -2.38
CSTF1Q05048 Y_RNA.328-201ENST00000365208 113 ntBASIC0.19□□□□□ -2.38
CSTF1Q05048 RNU6-1327P-201ENST00000365302 105 ntBASIC0.19□□□□□ -2.38
CSTF1Q05048 RNU6-209P-201ENST00000384118 107 ntBASIC0.19□□□□□ -2.38
CSTF1Q05048 RNU6-429P-201ENST00000384582 108 ntBASIC0.19□□□□□ -2.38
CSTF1Q05048 Y_RNA.586-201ENST00000391146 98 ntBASIC0.19□□□□□ -2.38
CSTF1Q05048 SNORA70.25-201ENST00000612741 95 ntBASIC0.19□□□□□ -2.38
CSTF1Q05048 MIR101-2-201ENST00000362195 79 ntBASIC0.18□□□□□ -2.38
CSTF1Q05048 Y_RNA.221-201ENST00000364248 96 ntBASIC0.18□□□□□ -2.38
CSTF1Q05048 RNU6-726P-201ENST00000364680 107 ntBASIC0.18□□□□□ -2.38
CSTF1Q05048 Y_RNA.360-201ENST00000365512 102 ntBASIC0.18□□□□□ -2.38
CSTF1Q05048 RNY1P5-201ENST00000383890 115 ntBASIC0.18□□□□□ -2.38
CSTF1Q05048 AC073261.1-201ENST00000429409 121 ntBASIC0.18□□□□□ -2.38
CSTF1Q05048 RNU7-195P-201ENST00000458793 62 ntBASIC0.18□□□□□ -2.38
CSTF1Q05048 RNA5SP227-201ENST00000516184 113 ntBASIC0.18□□□□□ -2.38
CSTF1Q05048 RNU6-469P-201ENST00000516253 101 ntBASIC0.18□□□□□ -2.38
CSTF1Q05048 MIR3133-201ENST00000583157 78 ntBASIC0.18□□□□□ -2.38
CSTF1Q05048 MIR4639-201ENST00000584938 69 ntBASIC0.18□□□□□ -2.38
CSTF1Q05048 AP001362.1-201ENST00000625165 124 ntBASIC0.18□□□□□ -2.38
CSTF1Q05048 MTND5P18-201ENST00000445624 1801 ntBASIC0.17□□□□□ -2.38
CSTF1Q05048 Y_RNA.56-201ENST00000362798 112 ntBASIC0.17□□□□□ -2.38
CSTF1Q05048 RNA5SP403-201ENST00000363598 108 ntBASIC0.17□□□□□ -2.38
CSTF1Q05048 RNU6-647P-201ENST00000364243 107 ntBASIC0.17□□□□□ -2.38
CSTF1Q05048 Y_RNA.299-201ENST00000364973 94 ntBASIC0.17□□□□□ -2.38
CSTF1Q05048 Y_RNA.549-201ENST00000384657 102 ntBASIC0.17□□□□□ -2.38
CSTF1Q05048 MIR548D2-201ENST00000384955 97 ntBASIC0.17□□□□□ -2.38
CSTF1Q05048 SNORA7.5-201ENST00000410672 110 ntBASIC0.17□□□□□ -2.38
CSTF1Q05048 RNU6-1211P-201ENST00000459179 105 ntBASIC0.17□□□□□ -2.38
CSTF1Q05048 Y_RNA.423-201ENST00000384057 113 ntBASIC0.16□□□□□ -2.38
CSTF1Q05048 MIR516A2-201ENST00000384888 90 ntBASIC0.16□□□□□ -2.38
CSTF1Q05048 MIR516A1-201ENST00000385033 90 ntBASIC0.16□□□□□ -2.38
CSTF1Q05048 SNORD77B-201ENST00000391112 67 ntBASIC0.16□□□□□ -2.38
CSTF1Q05048 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
CSTF1Q05048 SNORD63B-201ENST00000411005 70 ntBASIC0.16□□□□□ -2.38
CSTF1Q05048 AL161932.1-201ENST00000437408 146 ntBASIC0.16□□□□□ -2.38
CSTF1Q05048 RNU7-104P-201ENST00000459398 79 ntBASIC0.16□□□□□ -2.38
CSTF1Q05048 RNU6-1061P-201ENST00000516530 99 ntBASIC0.16□□□□□ -2.38
CSTF1Q05048 MIR3163-201ENST00000581592 73 ntBASIC0.16□□□□□ -2.38
CSTF1Q05048 AC025166.1-201ENST00000612411 163 ntBASIC0.16□□□□□ -2.38
CSTF1Q05048 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.16□□□□□ -2.38
CSTF1Q05048 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.16□□□□□ -2.38
CSTF1Q05048 Y_RNA.98-201ENST00000363109 102 ntBASIC0.15□□□□□ -2.39
CSTF1Q05048 RNU6-865P-201ENST00000364772 107 ntBASIC0.15□□□□□ -2.39
CSTF1Q05048 RNU6-1126P-201ENST00000384002 107 ntBASIC0.15□□□□□ -2.39
CSTF1Q05048 MIR599-201ENST00000385069 95 ntBASIC0.15□□□□□ -2.39
CSTF1Q05048 MIR759-201ENST00000390224 91 ntBASIC0.15□□□□□ -2.39
CSTF1Q05048 MIR548H2-201ENST00000408874 88 ntBASIC0.15□□□□□ -2.39
CSTF1Q05048 SNORD33.1-201ENST00000516213 88 ntBASIC0.15□□□□□ -2.39
CSTF1Q05048 RNU6-850P-201ENST00000516934 103 ntBASIC0.15□□□□□ -2.39
CSTF1Q05048 MIR3613-201ENST00000579844 87 ntBASIC0.15□□□□□ -2.39
CSTF1Q05048 MIR548AG2-201ENST00000581228 64 ntBASIC0.15□□□□□ -2.39
CSTF1Q05048 MIR3668-201ENST00000582138 75 ntBASIC0.15□□□□□ -2.39
CSTF1Q05048 Y_RNA.35-201ENST00000362601 101 ntBASIC0.14□□□□□ -2.39
CSTF1Q05048 Y_RNA.362-201ENST00000365518 110 ntBASIC0.14□□□□□ -2.39
CSTF1Q05048 SNORA40-201ENST00000388090 126 ntBASIC0.14□□□□□ -2.39
CSTF1Q05048 RNU6-269P-201ENST00000391077 97 ntBASIC0.14□□□□□ -2.39
CSTF1Q05048 RNU2-59P-201ENST00000410482 191 ntBASIC0.14□□□□□ -2.39
CSTF1Q05048 RNA5SP136-201ENST00000410906 107 ntBASIC0.14□□□□□ -2.39
CSTF1Q05048 AC069113.3-201ENST00000521019 150 ntBASIC0.14□□□□□ -2.39
CSTF1Q05048 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.14□□□□□ -2.39
CSTF1Q05048 AC091304.10-201ENST00000641554 121 ntBASIC0.14□□□□□ -2.39
CSTF1Q05048 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.14□□□□□ -2.39
CSTF1Q05048 RNU6-363P-201ENST00000362895 105 ntBASIC0.13□□□□□ -2.39
CSTF1Q05048 RNU6-1229P-201ENST00000364295 107 ntBASIC0.13□□□□□ -2.39
CSTF1Q05048 MIR635-201ENST00000384830 98 ntBASIC0.13□□□□□ -2.39
CSTF1Q05048 AC138869.1-201ENST00000568623 124 ntBASIC0.13□□□□□ -2.39
CSTF1Q05048 MIR548H5-201ENST00000580314 60 ntBASIC0.13□□□□□ -2.39
CSTF1Q05048 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.13□□□□□ -2.39
CSTF1Q05048 AL162376.1-201ENST00000624117 175 ntBASIC0.13□□□□□ -2.39
CSTF1Q05048 MIR499B-201ENST00000636498 73 ntBASIC0.13□□□□□ -2.39
CSTF1Q05048 RNU6-1313P-201ENST00000362622 102 ntBASIC0.12□□□□□ -2.39
CSTF1Q05048 RNU6-170P-201ENST00000362832 104 ntBASIC0.12□□□□□ -2.39
CSTF1Q05048 Y_RNA.71-201ENST00000362892 104 ntBASIC0.12□□□□□ -2.39
CSTF1Q05048 Y_RNA.213-201ENST00000364178 111 ntBASIC0.12□□□□□ -2.39
CSTF1Q05048 RNU6-1201P-201ENST00000384227 107 ntBASIC0.12□□□□□ -2.39
CSTF1Q05048 MIR501-201ENST00000390204 84 ntBASIC0.12□□□□□ -2.39
CSTF1Q05048 RNU6-127P-201ENST00000390897 107 ntBASIC0.12□□□□□ -2.39
CSTF1Q05048 SNORD41.1-201ENST00000391000 69 ntBASIC0.12□□□□□ -2.39
CSTF1Q05048 AC097635.1-201ENST00000450678 155 ntBASIC0.12□□□□□ -2.39
CSTF1Q05048 Y_RNA.809-201ENST00000516058 95 ntBASIC0.12□□□□□ -2.39
CSTF1Q05048 RNU6-1265P-201ENST00000516342 103 ntBASIC0.12□□□□□ -2.39
CSTF1Q05048 RNU6-659P-201ENST00000516454 104 ntBASIC0.12□□□□□ -2.39
CSTF1Q05048 MIR3920-201ENST00000581751 86 ntBASIC0.12□□□□□ -2.39
CSTF1Q05048 MIR4768-201ENST00000585270 74 ntBASIC0.12□□□□□ -2.39
CSTF1Q05048 MIR3914-2-201ENST00000637339 95 ntBASIC0.12□□□□□ -2.39
CSTF1Q05048 AL157777.2-201ENST00000258070 137 ntBASIC0.11□□□□□ -2.39
CSTF1Q05048 Y_RNA.323-201ENST00000365157 109 ntBASIC0.11□□□□□ -2.39
CSTF1Q05048 Y_RNA.343-201ENST00000365354 112 ntBASIC0.11□□□□□ -2.39
CSTF1Q05048 RNU6-524P-201ENST00000384270 107 ntBASIC0.11□□□□□ -2.39
CSTF1Q05048 MIR548A1-201ENST00000385041 97 ntBASIC0.11□□□□□ -2.39
CSTF1Q05048 MIR577-201ENST00000385196 96 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms