Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 AC145350.1-201ENST00000567426 208 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 AC108081.1-201ENST00000604358 221 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 RNU6-647P-201ENST00000364243 107 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 SNORA63.6-201ENST00000364921 119 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 MIR539-201ENST00000365690 78 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 SNORD116-11-201ENST00000383882 92 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 RNU6-144P-201ENST00000383951 107 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 MT-TI-201ENST00000387365 69 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 RNU6-519P-201ENST00000410590 108 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.36□□□□□ -2.47
COL7A1Q02388 AC009161.1-201ENST00000417306 376 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.36□□□□□ -2.47
COL7A1Q02388 MIR2113-201ENST00000459007 91 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.36□□□□□ -2.47
COL7A1Q02388 AC019235.1-201ENST00000503847 207 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 FGF7P4-201ENST00000509595 295 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.36□□□□□ -2.47
COL7A1Q02388 MIR4744-201ENST00000581563 82 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 AL132765.2-201ENST00000610812 351 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 AC093783.1-201ENST00000612976 329 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 AL050303.3-201ENST00000613704 284 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.36□□□□□ -2.47
COL7A1Q02388 RNU6-451P-201ENST00000362921 107 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 RNU6-103P-201ENST00000363686 107 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 SNORD38.2-201ENST00000384470 69 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 SNORD115-46-201ENST00000390982 71 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 RNU6-493P-201ENST00000391321 108 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 MIR548E-201ENST00000408287 88 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 AC099799.1-201ENST00000439809 192 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 RNU6-408P-201ENST00000515910 100 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 RNU6-566P-201ENST00000516790 107 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
COL7A1Q02388 AC006362.1-201ENST00000567392 174 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 AC119751.7-201ENST00000600494 245 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 AL359880.1-201ENST00000621879 266 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
COL7A1Q02388 AL512310.12-203ENST00000640543 90 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 RNU4-24P-201ENST00000364565 139 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 RNU6-164P-201ENST00000364604 103 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 SNORA79-201ENST00000408376 140 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 RNU4-61P-201ENST00000411243 107 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 AC107399.1-201ENST00000451226 265 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 MTND4LP30-201ENST00000454092 297 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 RNU6-807P-201ENST00000516805 107 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 U7.5-201ENST00000517224 61 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.37□□□□□ -2.47
COL7A1Q02388 AC005899.2-201ENST00000584353 90 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 MIR6509-201ENST00000614603 85 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 AP001362.1-201ENST00000625165 124 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 RNU6-230P-201ENST00000362457 104 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 RNU6-1128P-201ENST00000362825 109 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 MIR514A2-201ENST00000385131 88 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 MIR514A3-201ENST00000385132 88 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 RNU6-121P-201ENST00000410525 99 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 SNORA19.1-201ENST00000410656 129 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 AC138393.2-201ENST00000414742 246 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 AC096644.2-201ENST00000429278 159 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 AL353691.2-201ENST00000443795 59 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 MTND1P1-201ENST00000445453 368 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 RNU7-152P-201ENST00000458982 64 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 RN7SKP298-201ENST00000515950 94 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 RN7SKP295-201ENST00000517264 153 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 AC120024.2-201ENST00000576526 175 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 MIR4756-201ENST00000577874 78 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 U4.4-201ENST00000620626 117 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 snoU18.1-201ENST00000629629 71 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 AC021753.1-201ENST00000635724 168 ntBASIC-0.37□□□□□ -2.47
COL7A1Q02388 SNORA63.2-201ENST00000362603 126 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 SNORD113-6-201ENST00000363345 75 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 RNU6-957P-201ENST00000363652 99 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 Y_RNA.296-201ENST00000364930 108 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 214.8 ms