Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 RPS29P28-201ENST00000446439 141 ntBASIC1.1□□□□□ -2.23
E2F1Q01094 RNA5SP404-201ENST00000517118 132 ntBASIC1.1□□□□□ -2.23
E2F1Q01094 AC138749.4-201ENST00000563970 127 ntBASIC1.1□□□□□ -2.23
E2F1Q01094 Y_RNA.95-201ENST00000363079 95 ntBASIC1.09□□□□□ -2.23
E2F1Q01094 Y_RNA.98-201ENST00000363109 102 ntBASIC1.09□□□□□ -2.23
E2F1Q01094 Y_RNA.220-201ENST00000364244 109 ntBASIC1.09□□□□□ -2.23
E2F1Q01094 MIR125B2-201ENST00000385128 89 ntBASIC1.09□□□□□ -2.23
E2F1Q01094 MIR1827-201ENST00000408549 66 ntBASIC1.09□□□□□ -2.23
E2F1Q01094 MIR548J-201ENST00000408833 112 ntBASIC1.09□□□□□ -2.23
E2F1Q01094 MIR4491-201ENST00000581087 68 ntBASIC1.09□□□□□ -2.23
E2F1Q01094 MIR4676-201ENST00000583078 72 ntBASIC1.09□□□□□ -2.23
E2F1Q01094 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
E2F1Q01094 Y_RNA.221-201ENST00000364248 96 ntBASIC1.08□□□□□ -2.24
E2F1Q01094 RNU6-1113P-201ENST00000384348 107 ntBASIC1.08□□□□□ -2.24
E2F1Q01094 MIR200A-201ENST00000384875 90 ntBASIC1.08□□□□□ -2.24
E2F1Q01094 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.08□□□□□ -2.24
E2F1Q01094 Y_RNA.620-201ENST00000411009 88 ntBASIC1.08□□□□□ -2.24
E2F1Q01094 AC067940.1-201ENST00000458411 300 ntBASIC1.08□□□□□ -2.24
E2F1Q01094 MIR5588-201ENST00000581890 63 ntBASIC1.08□□□□□ -2.24
E2F1Q01094 AP001362.1-201ENST00000625165 124 ntBASIC1.08□□□□□ -2.24
E2F1Q01094 U6.109-201ENST00000636749 87 ntBASIC1.08□□□□□ -2.24
E2F1Q01094 AC006160.2-201ENST00000637708 154 ntBASIC1.08□□□□□ -2.24
E2F1Q01094 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
E2F1Q01094 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
E2F1Q01094 MIR1-1-201ENST00000362147 71 ntBASIC1.07□□□□□ -2.24
E2F1Q01094 RNA5SP133-201ENST00000363368 119 ntBASIC1.07□□□□□ -2.24
E2F1Q01094 SNORD114-26-201ENST00000363543 72 ntBASIC1.07□□□□□ -2.24
E2F1Q01094 Y_RNA.219-201ENST00000364232 113 ntBASIC1.07□□□□□ -2.24
E2F1Q01094 Y_RNA.377-201ENST00000365644 108 ntBASIC1.07□□□□□ -2.24
E2F1Q01094 MIR598-201ENST00000384868 97 ntBASIC1.07□□□□□ -2.24
E2F1Q01094 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
E2F1Q01094 RNU4-83P-201ENST00000410863 133 ntBASIC1.07□□□□□ -2.24
E2F1Q01094 SNORD124-201ENST00000459577 104 ntBASIC1.07□□□□□ -2.24
E2F1Q01094 Y_RNA.685-201ENST00000516532 108 ntBASIC1.07□□□□□ -2.24
E2F1Q01094 RNU6-86P-201ENST00000606534 107 ntBASIC1.07□□□□□ -2.24
E2F1Q01094 AC103810.7-201ENST00000607821 91 ntBASIC1.07□□□□□ -2.24
E2F1Q01094 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.07□□□□□ -2.24
E2F1Q01094 AL512310.12-203ENST00000640543 90 ntBASIC1.07□□□□□ -2.24
E2F1Q01094 RNU6-1276P-201ENST00000365372 104 ntBASIC1.06□□□□□ -2.24
E2F1Q01094 SNORD58A-201ENST00000383875 65 ntBASIC1.06□□□□□ -2.24
E2F1Q01094 RNU6-820P-201ENST00000384273 107 ntBASIC1.06□□□□□ -2.24
E2F1Q01094 MIR100-201ENST00000385259 80 ntBASIC1.06□□□□□ -2.24
E2F1Q01094 FABP5P4-201ENST00000437203 171 ntBASIC1.06□□□□□ -2.24
E2F1Q01094 MIR4804-201ENST00000581683 73 ntBASIC1.06□□□□□ -2.24
E2F1Q01094 MIR6767-201ENST00000637302 66 ntBASIC1.06□□□□□ -2.24
E2F1Q01094 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
E2F1Q01094 Y_RNA.94-201ENST00000363068 106 ntBASIC1.05□□□□□ -2.24
E2F1Q01094 RNU6-403P-201ENST00000363163 104 ntBASIC1.05□□□□□ -2.24
E2F1Q01094 RNU6-1244P-201ENST00000363614 108 ntBASIC1.05□□□□□ -2.24
E2F1Q01094 RNY1P4-201ENST00000384595 115 ntBASIC1.05□□□□□ -2.24
E2F1Q01094 RNU6-65P-201ENST00000516332 98 ntBASIC1.05□□□□□ -2.24
E2F1Q01094 MIR4668-201ENST00000582284 70 ntBASIC1.05□□□□□ -2.24
E2F1Q01094 SNORD92-201ENST00000585078 85 ntBASIC1.05□□□□□ -2.24
E2F1Q01094 MIR8066-201ENST00000617280 78 ntBASIC1.05□□□□□ -2.24
E2F1Q01094 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
E2F1Q01094 Y_RNA.42-201ENST00000362660 108 ntBASIC1.04□□□□□ -2.24
E2F1Q01094 Y_RNA.119-201ENST00000363301 96 ntBASIC1.04□□□□□ -2.24
E2F1Q01094 RNU4-36P-201ENST00000364294 144 ntBASIC1.04□□□□□ -2.24
E2F1Q01094 Y_RNA.244-201ENST00000364484 109 ntBASIC1.04□□□□□ -2.24
E2F1Q01094 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
E2F1Q01094 MIR942-201ENST00000401111 86 ntBASIC1.04□□□□□ -2.24
E2F1Q01094 MIR938-201ENST00000401216 83 ntBASIC1.04□□□□□ -2.24
E2F1Q01094 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
E2F1Q01094 Y_RNA.659-201ENST00000515994 113 ntBASIC1.04□□□□□ -2.24
E2F1Q01094 RNU6-977P-201ENST00000516411 103 ntBASIC1.04□□□□□ -2.24
E2F1Q01094 RNU6-1110P-201ENST00000516462 101 ntBASIC1.04□□□□□ -2.24
E2F1Q01094 SNORA25.16-201ENST00000516741 121 ntBASIC1.04□□□□□ -2.24
E2F1Q01094 RNU7-156P-201ENST00000517214 74 ntBASIC1.04□□□□□ -2.24
E2F1Q01094 MIR4666B-201ENST00000578142 81 ntBASIC1.04□□□□□ -2.24
E2F1Q01094 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.04□□□□□ -2.24
E2F1Q01094 AC025521.1-201ENST00000621624 286 ntBASIC1.04□□□□□ -2.24
E2F1Q01094 Y_RNA.788-201ENST00000622394 112 ntBASIC1.04□□□□□ -2.24
E2F1Q01094 MIR548BB-201ENST00000626714 66 ntBASIC1.04□□□□□ -2.24
E2F1Q01094 Y_RNA.10-201ENST00000362371 110 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 Y_RNA.13-201ENST00000362403 112 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 SNORD38.1-201ENST00000363863 68 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 RNY1P1-201ENST00000364372 112 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 SNORD114-24-201ENST00000365029 72 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 RNU6-524P-201ENST00000384270 107 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 SNORA72.6-201ENST00000384520 129 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 RNU6-813P-201ENST00000384691 107 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 MIR889-201ENST00000401280 79 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 RNU6-887P-201ENST00000410660 100 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 RNU7-56P-201ENST00000458744 62 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 U7.7-201ENST00000459276 60 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 RNU7-171P-201ENST00000459581 62 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 RNU6-857P-201ENST00000515893 110 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 RNU6-1194P-201ENST00000516208 104 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 RNU7-153P-201ENST00000516455 62 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 RNU6-765P-201ENST00000516916 99 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 AC090897.1-201ENST00000580909 226 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 MIR6857-201ENST00000613267 93 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 MIR6082-201ENST00000613604 109 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 PVT1_3.1-201ENST00000620853 95 ntBASIC1.03□□□□□ -2.24
E2F1Q01094 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
E2F1Q01094 HSBP1P2-201ENST00000299671 229 ntBASIC1.02□□□□□ -2.25
E2F1Q01094 Y_RNA.36-201ENST00000362602 112 ntBASIC1.02□□□□□ -2.25
E2F1Q01094 RNU4-58P-201ENST00000363192 141 ntBASIC1.02□□□□□ -2.25
E2F1Q01094 Y_RNA.173-201ENST00000363776 113 ntBASIC1.02□□□□□ -2.25
E2F1Q01094 RNU6-364P-201ENST00000384387 107 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms