Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 AL035461.1-201ENST00000421490 332 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 AL593851.1-201ENST00000426171 157 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 Z69908.1-201ENST00000622603 247 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 MIR3662-201ENST00000637030 95 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 RNU6-510P-201ENST00000391239 108 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 RNU6-648P-201ENST00000410190 107 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 AL731563.1-201ENST00000442202 214 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.92□□□□□ -2.56
HSPG2P98160 AP002392.1-201ENST00000537692 208 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 RNU4-69P-201ENST00000410677 143 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 RNU6-383P-201ENST00000410864 94 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 MTATP6P21-201ENST00000440681 189 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 RNU7-164P-201ENST00000459221 62 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 MTND2P31-201ENST00000512602 616 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 RNU6-807P-201ENST00000516805 107 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 AP002795.1-201ENST00000534879 84 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 RNU6-306P-201ENST00000384617 107 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-0.92□□□□□ -2.56
HSPG2P98160 HSPE1P25-201ENST00000455484 251 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 RNU7-66P-201ENST00000459469 62 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 RNU6-764P-201ENST00000516396 105 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 MIR4536-1-201ENST00000583537 88 ntBASIC-0.92□□□□□ -2.56
HSPG2P98160 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.93□□□□□ -2.56
HSPG2P98160 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.93□□□□□ -2.56
HSPG2P98160 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.93□□□□□ -2.56
HSPG2P98160 MIR4509-3-201ENST00000578671 94 ntBASIC-0.93□□□□□ -2.56
HSPG2P98160 MIR4509-2-201ENST00000583920 94 ntBASIC-0.93□□□□□ -2.56
HSPG2P98160 MIR4509-1-201ENST00000618224 94 ntBASIC-0.93□□□□□ -2.56
HSPG2P98160 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.93□□□□□ -2.56
HSPG2P98160 SNRPGP8-201ENST00000454064 226 ntBASIC-0.93□□□□□ -2.56
HSPG2P98160 MTND2P14-201ENST00000482139 351 ntBASIC-0.93□□□□□ -2.56
HSPG2P98160 CYP3A54P-201ENST00000566950 75 ntBASIC-0.93□□□□□ -2.56
HSPG2P98160 AC138907.4-201ENST00000570107 226 ntBASIC-0.93□□□□□ -2.56
HSPG2P98160 RNU6-248P-201ENST00000410720 107 ntBASIC-0.93□□□□□ -2.56
HSPG2P98160 RBMX2P4-201ENST00000441256 376 ntBASIC-0.93□□□□□ -2.56
HSPG2P98160 MTND3P22-201ENST00000510932 243 ntBASIC-0.93□□□□□ -2.56
HSPG2P98160 SCARNA15-202ENST00000516881 127 ntBASIC-0.93□□□□□ -2.56
HSPG2P98160 UBE2WP1-201ENST00000362030 340 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 RNU6-978P-201ENST00000364371 103 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.94□□□□□ -2.56
HSPG2P98160 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 AC138393.2-201ENST00000414742 246 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 MTATP6P29-201ENST00000415057 132 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 RNU6-256P-201ENST00000516747 97 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 RNU6-264P-201ENST00000517134 104 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 SNORA33.1-201ENST00000364957 130 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 MIR203A-201ENST00000384836 110 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 MT-TH-201ENST00000387441 69 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 SNORA79-201ENST00000408376 140 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 MIR23C-201ENST00000579846 100 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 AC037487.3-201ENST00000606668 112 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 AC048344.4-201ENST00000619744 527 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.94□□□□□ -2.56
HSPG2P98160 snoU13.17-201ENST00000458802 104 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.94□□□□□ -2.56
HSPG2P98160 MRPS35P2-201ENST00000508242 191 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 RNU6-75P-201ENST00000515944 104 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 MIR1244-1-201ENST00000612829 85 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 MIR1244-3-201ENST00000635744 85 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 MIR1244-2-201ENST00000636449 85 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 MIR1244-4-202ENST00000636813 85 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 AC073869.6-201ENST00000640656 341 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 Y_RNA.59-201ENST00000362828 102 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 SNORD81.1-201ENST00000363064 77 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 RNU6-696P-201ENST00000390834 107 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 RNU6-358P-201ENST00000516564 75 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 NBR2-204ENST00000587322 63 ntBASIC-0.94□□□□□ -2.56
HSPG2P98160 RNU6-690P-201ENST00000365242 106 ntBASIC-0.95□□□□□ -2.56
HSPG2P98160 RNU2-72P-201ENST00000411175 163 ntBASIC-0.95□□□□□ -2.56
HSPG2P98160 RNU6-453P-201ENST00000516819 85 ntBASIC-0.95□□□□□ -2.56
HSPG2P98160 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.95□□□□□ -2.56
HSPG2P98160 RPL35AP4-201ENST00000412007 102 ntBASIC-0.95□□□□□ -2.56
HSPG2P98160 AC097484.2-201ENST00000509147 251 ntBASIC-0.95□□□□□ -2.56
HSPG2P98160 SNORA20.3-201ENST00000516880 132 ntBASIC-0.95□□□□□ -2.56
HSPG2P98160 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.95□□□□□ -2.56
HSPG2P98160 MIR6739-201ENST00000622461 75 ntBASIC-0.95□□□□□ -2.56
HSPG2P98160 RNU6-957P-201ENST00000363652 99 ntBASIC-0.95□□□□□ -2.56
HSPG2P98160 RNU6-990P-201ENST00000364385 104 ntBASIC-0.95□□□□□ -2.56
HSPG2P98160 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.95□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms