Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SNORD63B-201ENST00000411005 70 ntBASIC1.09□□□□□ -2.23
CLRN1P58418 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.09□□□□□ -2.23
CLRN1P58418 TRAJ51-201ENST00000504127 63 ntBASIC1.09□□□□□ -2.23
CLRN1P58418 RNU6-448P-201ENST00000517052 107 ntBASIC1.09□□□□□ -2.23
CLRN1P58418 AP003327.1-201ENST00000529684 127 ntBASIC1.09□□□□□ -2.23
CLRN1P58418 AL513043.2-201ENST00000573941 143 ntBASIC1.09□□□□□ -2.23
CLRN1P58418 MIR548H5-201ENST00000580314 60 ntBASIC1.09□□□□□ -2.23
CLRN1P58418 MIR3660-201ENST00000584845 100 ntBASIC1.09□□□□□ -2.23
CLRN1P58418 AL353770.2-201ENST00000620024 78 ntBASIC1.09□□□□□ -2.23
CLRN1P58418 AC025521.1-201ENST00000621624 286 ntBASIC1.09□□□□□ -2.23
CLRN1P58418 RNU6-535P-201ENST00000384722 107 ntBASIC1.08□□□□□ -2.24
CLRN1P58418 SNORD105-201ENST00000386910 85 ntBASIC1.08□□□□□ -2.24
CLRN1P58418 RNU7-106P-201ENST00000459514 67 ntBASIC1.08□□□□□ -2.24
CLRN1P58418 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
CLRN1P58418 RNU6-1335P-201ENST00000365426 107 ntBASIC1.07□□□□□ -2.24
CLRN1P58418 RNU6-939P-201ENST00000384634 107 ntBASIC1.07□□□□□ -2.24
CLRN1P58418 RNU6-321P-201ENST00000410912 106 ntBASIC1.07□□□□□ -2.24
CLRN1P58418 AC092628.1-201ENST00000436250 252 ntBASIC1.07□□□□□ -2.24
CLRN1P58418 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.07□□□□□ -2.24
CLRN1P58418 RNU7-10P-201ENST00000607194 63 ntBASIC1.07□□□□□ -2.24
CLRN1P58418 MIR6078-201ENST00000611069 100 ntBASIC1.07□□□□□ -2.24
CLRN1P58418 SNORD116-10-201ENST00000363791 102 ntBASIC1.06□□□□□ -2.24
CLRN1P58418 Y_RNA.327-201ENST00000365201 102 ntBASIC1.06□□□□□ -2.24
CLRN1P58418 RNU6-844P-201ENST00000517175 102 ntBASIC1.06□□□□□ -2.24
CLRN1P58418 RNA5SP245-201ENST00000364239 121 ntBASIC1.05□□□□□ -2.24
CLRN1P58418 RNU6-1254P-201ENST00000391266 104 ntBASIC1.05□□□□□ -2.24
CLRN1P58418 RNU7-195P-201ENST00000458793 62 ntBASIC1.05□□□□□ -2.24
CLRN1P58418 RNA5SP255-201ENST00000516370 107 ntBASIC1.05□□□□□ -2.24
CLRN1P58418 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
CLRN1P58418 SNORD36A-201ENST00000362874 73 ntBASIC1.04□□□□□ -2.24
CLRN1P58418 RNU6-294P-201ENST00000364999 102 ntBASIC1.04□□□□□ -2.24
CLRN1P58418 RNU6-243P-201ENST00000391140 107 ntBASIC1.04□□□□□ -2.24
CLRN1P58418 RNA5SP247-201ENST00000411181 105 ntBASIC1.04□□□□□ -2.24
CLRN1P58418 AC006254.2-201ENST00000603259 279 ntBASIC1.04□□□□□ -2.24
CLRN1P58418 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.24
CLRN1P58418 Y_RNA.32-201ENST00000362589 110 ntBASIC1.03□□□□□ -2.24
CLRN1P58418 AC026421.1-201ENST00000519101 163 ntBASIC1.03□□□□□ -2.24
CLRN1P58418 AC138907.6-201ENST00000568401 126 ntBASIC1.03□□□□□ -2.24
CLRN1P58418 AC138869.1-201ENST00000568623 124 ntBASIC1.03□□□□□ -2.24
CLRN1P58418 AC025627.3-201ENST00000582078 182 ntBASIC1.03□□□□□ -2.24
CLRN1P58418 uc_338.16-201ENST00000621804 95 ntBASIC1.03□□□□□ -2.24
CLRN1P58418 SNORA25.9-201ENST00000365087 128 ntBASIC1.02□□□□□ -2.25
CLRN1P58418 MIR1285-1-201ENST00000408593 84 ntBASIC1.02□□□□□ -2.25
CLRN1P58418 AC002350.1-201ENST00000490759 375 ntBASIC1.02□□□□□ -2.25
CLRN1P58418 Y_RNA.809-201ENST00000516058 95 ntBASIC1.02□□□□□ -2.25
CLRN1P58418 SNORA31.14-201ENST00000516728 116 ntBASIC1.02□□□□□ -2.25
CLRN1P58418 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CLRN1P58418 MIR519A1-201ENST00000385257 85 ntBASIC1.01□□□□□ -2.25
CLRN1P58418 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.01□□□□□ -2.25
CLRN1P58418 Y_RNA.174-201ENST00000363781 105 ntBASIC1□□□□□ -2.25
CLRN1P58418 RNU6-1134P-201ENST00000365156 101 ntBASIC1□□□□□ -2.25
CLRN1P58418 RNA5SP117-201ENST00000365294 118 ntBASIC1□□□□□ -2.25
CLRN1P58418 OR2A41P-201ENST00000473586 105 ntBASIC1□□□□□ -2.25
CLRN1P58418 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1□□□□□ -2.25
CLRN1P58418 RNU6-392P-201ENST00000364926 101 ntBASIC0.99□□□□□ -2.25
CLRN1P58418 MIR573-201ENST00000384964 99 ntBASIC0.99□□□□□ -2.25
CLRN1P58418 MIR599-201ENST00000385069 95 ntBASIC0.99□□□□□ -2.25
CLRN1P58418 SNORD99-201ENST00000408612 74 ntBASIC0.99□□□□□ -2.25
CLRN1P58418 Y_RNA.609-201ENST00000410669 89 ntBASIC0.99□□□□□ -2.25
CLRN1P58418 AC097635.1-201ENST00000450678 155 ntBASIC0.99□□□□□ -2.25
CLRN1P58418 snoU13.11-201ENST00000459219 104 ntBASIC0.99□□□□□ -2.25
CLRN1P58418 Y_RNA.648-201ENST00000459455 110 ntBASIC0.99□□□□□ -2.25
CLRN1P58418 RNU6-1260P-201ENST00000362944 107 ntBASIC0.98□□□□□ -2.25
CLRN1P58418 MIR499A-201ENST00000384903 122 ntBASIC0.98□□□□□ -2.25
CLRN1P58418 AC244505.6-201ENST00000452829 130 ntBASIC0.98□□□□□ -2.25
CLRN1P58418 MIR4679-1-201ENST00000637619 75 ntBASIC0.98□□□□□ -2.25
CLRN1P58418 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.98□□□□□ -2.25
CLRN1P58418 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
CLRN1P58418 RNU6-524P-201ENST00000384270 107 ntBASIC0.97□□□□□ -2.25
CLRN1P58418 SNORD116-22-201ENST00000384430 92 ntBASIC0.97□□□□□ -2.25
CLRN1P58418 Y_RNA.558-201ENST00000384685 113 ntBASIC0.97□□□□□ -2.25
CLRN1P58418 MIR644A-201ENST00000385262 94 ntBASIC0.97□□□□□ -2.25
CLRN1P58418 MIR1287-201ENST00000408492 90 ntBASIC0.97□□□□□ -2.25
CLRN1P58418 RNU6-519P-201ENST00000410590 108 ntBASIC0.97□□□□□ -2.25
CLRN1P58418 RNU7-85P-201ENST00000458851 63 ntBASIC0.97□□□□□ -2.25
CLRN1P58418 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.97□□□□□ -2.25
CLRN1P58418 AC011195.1-201ENST00000578177 177 ntBASIC0.97□□□□□ -2.25
CLRN1P58418 MIR3612-201ENST00000579753 87 ntBASIC0.97□□□□□ -2.25
CLRN1P58418 MIR4295-201ENST00000585286 85 ntBASIC0.97□□□□□ -2.25
CLRN1P58418 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.97□□□□□ -2.25
CLRN1P58418 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.97□□□□□ -2.25
CLRN1P58418 RNU6-957P-201ENST00000363652 99 ntBASIC0.96□□□□□ -2.26
CLRN1P58418 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CLRN1P58418 RNY1P4-201ENST00000384595 115 ntBASIC0.96□□□□□ -2.26
CLRN1P58418 AL161932.1-201ENST00000437408 146 ntBASIC0.96□□□□□ -2.26
CLRN1P58418 AC087343.1-201ENST00000477341 475 ntBASIC0.96□□□□□ -2.26
CLRN1P58418 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CLRN1P58418 Y_RNA.17-201ENST00000362433 111 ntBASIC0.95□□□□□ -2.26
CLRN1P58418 Y_RNA.221-201ENST00000364248 96 ntBASIC0.95□□□□□ -2.26
CLRN1P58418 Y_RNA.226-201ENST00000364337 114 ntBASIC0.95□□□□□ -2.26
CLRN1P58418 Y_RNA.283-201ENST00000364798 112 ntBASIC0.95□□□□□ -2.26
CLRN1P58418 RNU6-466P-201ENST00000391224 103 ntBASIC0.95□□□□□ -2.26
CLRN1P58418 RNU6-402P-201ENST00000410678 103 ntBASIC0.95□□□□□ -2.26
CLRN1P58418 AC244098.3-201ENST00000424803 96 ntBASIC0.95□□□□□ -2.26
CLRN1P58418 MIR4668-201ENST00000582284 70 ntBASIC0.95□□□□□ -2.26
CLRN1P58418 MIR4661-201ENST00000582720 75 ntBASIC0.95□□□□□ -2.26
CLRN1P58418 MIR8070-201ENST00000616510 88 ntBASIC0.95□□□□□ -2.26
CLRN1P58418 Y_RNA.593-201ENST00000410292 98 ntBASIC0.94□□□□□ -2.26
CLRN1P58418 SNORD4B-201ENST00000459083 72 ntBASIC0.94□□□□□ -2.26
CLRN1P58418 AL353765.1-201ENST00000605514 183 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms