Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 MIR3920-201ENST00000581751 86 ntBASIC-0.15□□□□□ -2.43
LIM2P55344 MIR4677-201ENST00000584153 80 ntBASIC-0.15□□□□□ -2.43
LIM2P55344 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.15□□□□□ -2.43
LIM2P55344 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.16□□□□□ -2.44
LIM2P55344 RNU7-195P-201ENST00000458793 62 ntBASIC-0.16□□□□□ -2.44
LIM2P55344 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.16□□□□□ -2.44
LIM2P55344 RNU7-6P-201ENST00000516845 62 ntBASIC-0.16□□□□□ -2.44
LIM2P55344 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.16□□□□□ -2.44
LIM2P55344 MIR3163-201ENST00000581592 73 ntBASIC-0.16□□□□□ -2.44
LIM2P55344 AL353621.2-201ENST00000605340 133 ntBASIC-0.16□□□□□ -2.44
LIM2P55344 SNORD38.2-201ENST00000384470 69 ntBASIC-0.17□□□□□ -2.44
LIM2P55344 SNORA75.1-201ENST00000391130 148 ntBASIC-0.17□□□□□ -2.44
LIM2P55344 SNORD110-201ENST00000408189 75 ntBASIC-0.17□□□□□ -2.44
LIM2P55344 RNU7-13P-201ENST00000516413 62 ntBASIC-0.17□□□□□ -2.44
LIM2P55344 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.17□□□□□ -2.44
LIM2P55344 RNU6-388P-201ENST00000517012 105 ntBASIC-0.17□□□□□ -2.44
LIM2P55344 RNU6-389P-201ENST00000517048 105 ntBASIC-0.17□□□□□ -2.44
LIM2P55344 AC004792.1-201ENST00000614523 137 ntBASIC-0.17□□□□□ -2.44
LIM2P55344 AP001340.1-201ENST00000624405 217 ntBASIC-0.17□□□□□ -2.44
LIM2P55344 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.18□□□□□ -2.44
LIM2P55344 RNU6-151P-201ENST00000364158 107 ntBASIC-0.18□□□□□ -2.44
LIM2P55344 RNU6-915P-201ENST00000364943 103 ntBASIC-0.18□□□□□ -2.44
LIM2P55344 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.18□□□□□ -2.44
LIM2P55344 RNU6-756P-201ENST00000383997 107 ntBASIC-0.18□□□□□ -2.44
LIM2P55344 MIR34C-201ENST00000384831 77 ntBASIC-0.18□□□□□ -2.44
LIM2P55344 RNA5SP136-201ENST00000410906 107 ntBASIC-0.18□□□□□ -2.44
LIM2P55344 AC006210.1-201ENST00000424882 111 ntBASIC-0.18□□□□□ -2.44
LIM2P55344 RNA5SP285-201ENST00000516619 119 ntBASIC-0.18□□□□□ -2.44
LIM2P55344 RNU6-180P-201ENST00000516697 61 ntBASIC-0.18□□□□□ -2.44
LIM2P55344 MIR3925-201ENST00000584674 77 ntBASIC-0.18□□□□□ -2.44
LIM2P55344 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.19□□□□□ -2.44
LIM2P55344 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.19□□□□□ -2.44
LIM2P55344 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.19□□□□□ -2.44
LIM2P55344 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.19□□□□□ -2.44
LIM2P55344 RNU6-647P-201ENST00000364243 107 ntBASIC-0.19□□□□□ -2.44
LIM2P55344 RNU6V-201ENST00000384105 107 ntBASIC-0.19□□□□□ -2.44
LIM2P55344 RNU6-929P-201ENST00000384429 107 ntBASIC-0.19□□□□□ -2.44
LIM2P55344 MT-TI-201ENST00000387365 69 ntBASIC-0.19□□□□□ -2.44
LIM2P55344 RNU6-460P-201ENST00000391158 108 ntBASIC-0.19□□□□□ -2.44
LIM2P55344 RNU6-394P-201ENST00000410735 107 ntBASIC-0.19□□□□□ -2.44
LIM2P55344 RNU7-106P-201ENST00000459514 67 ntBASIC-0.19□□□□□ -2.44
LIM2P55344 RNU6-521P-201ENST00000516663 105 ntBASIC-0.19□□□□□ -2.44
LIM2P55344 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.19□□□□□ -2.44
LIM2P55344 RNU6-850P-201ENST00000516934 103 ntBASIC-0.19□□□□□ -2.44
LIM2P55344 IGKV1-22-201ENST00000524313 326 ntBASIC-0.19□□□□□ -2.44
LIM2P55344 MTND5P40-201ENST00000559945 246 ntBASIC-0.19□□□□□ -2.44
LIM2P55344 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.2□□□□□ -2.44
LIM2P55344 SNORD115-44-201ENST00000365391 82 ntBASIC-0.2□□□□□ -2.44
LIM2P55344 RNU6-524P-201ENST00000384270 107 ntBASIC-0.2□□□□□ -2.44
LIM2P55344 MIR759-201ENST00000390224 91 ntBASIC-0.2□□□□□ -2.44
LIM2P55344 MIR513C-201ENST00000401352 84 ntBASIC-0.2□□□□□ -2.44
LIM2P55344 HMGN2P22-201ENST00000427588 175 ntBASIC-0.2□□□□□ -2.44
LIM2P55344 RNA5SP484-201ENST00000458857 111 ntBASIC-0.2□□□□□ -2.44
LIM2P55344 RN7SKP19-201ENST00000516016 252 ntBASIC-0.2□□□□□ -2.44
LIM2P55344 NAMPTP3-201ENST00000569273 224 ntBASIC-0.2□□□□□ -2.44
LIM2P55344 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.2□□□□□ -2.44
LIM2P55344 AC021753.1-201ENST00000635724 168 ntBASIC-0.2□□□□□ -2.44
LIM2P55344 RNU6-46P-201ENST00000383860 107 ntBASIC-0.21□□□□□ -2.44
LIM2P55344 MIR876-201ENST00000401147 81 ntBASIC-0.21□□□□□ -2.44
LIM2P55344 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.21□□□□□ -2.44
LIM2P55344 RNA5SP163-201ENST00000410304 99 ntBASIC-0.21□□□□□ -2.44
LIM2P55344 AC074198.2-201ENST00000508153 258 ntBASIC-0.21□□□□□ -2.44
LIM2P55344 SNORA25.13-201ENST00000516395 103 ntBASIC-0.21□□□□□ -2.44
LIM2P55344 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.21□□□□□ -2.44
LIM2P55344 AP001328.1-201ENST00000528550 176 ntBASIC-0.21□□□□□ -2.44
LIM2P55344 MIR148A-201ENST00000362215 68 ntBASIC-0.22□□□□□ -2.44
LIM2P55344 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.22□□□□□ -2.44
LIM2P55344 RNU1-141P-201ENST00000364623 158 ntBASIC-0.22□□□□□ -2.44
LIM2P55344 RNU6-302P-201ENST00000365249 107 ntBASIC-0.22□□□□□ -2.44
LIM2P55344 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.22□□□□□ -2.44
LIM2P55344 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.22□□□□□ -2.44
LIM2P55344 SNORA18.1-201ENST00000363418 128 ntBASIC-0.23□□□□□ -2.45
LIM2P55344 SNORA32.1-201ENST00000364514 115 ntBASIC-0.23□□□□□ -2.45
LIM2P55344 MIR617-201ENST00000385030 97 ntBASIC-0.23□□□□□ -2.45
LIM2P55344 CR383656.4-201ENST00000546909 122 ntBASIC-0.23□□□□□ -2.45
LIM2P55344 MIR548X2-201ENST00000579776 100 ntBASIC-0.23□□□□□ -2.45
LIM2P55344 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.24□□□□□ -2.45
LIM2P55344 SNORD116-18-201ENST00000383961 92 ntBASIC-0.24□□□□□ -2.45
LIM2P55344 MIR516A2-201ENST00000384888 90 ntBASIC-0.24□□□□□ -2.45
LIM2P55344 MIR516A1-201ENST00000385033 90 ntBASIC-0.24□□□□□ -2.45
LIM2P55344 AC109327.2-201ENST00000448339 378 ntBASIC-0.24□□□□□ -2.45
LIM2P55344 AC084368.1-201ENST00000620935 65 ntBASIC-0.24□□□□□ -2.45
LIM2P55344 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.25□□□□□ -2.45
LIM2P55344 AC093423.1-201ENST00000440817 142 ntBASIC-0.25□□□□□ -2.45
LIM2P55344 AL158147.1-201ENST00000443970 75 ntBASIC-0.25□□□□□ -2.45
LIM2P55344 RNU6-182P-201ENST00000516970 105 ntBASIC-0.25□□□□□ -2.45
LIM2P55344 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.25□□□□□ -2.45
LIM2P55344 IGLVI-20-201ENST00000519296 130 ntBASIC-0.25□□□□□ -2.45
LIM2P55344 MIR1255B1-201ENST00000636325 63 ntBASIC-0.25□□□□□ -2.45
LIM2P55344 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.26□□□□□ -2.45
LIM2P55344 RNU6-363P-201ENST00000362895 105 ntBASIC-0.26□□□□□ -2.45
LIM2P55344 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.26□□□□□ -2.45
LIM2P55344 MIR548D2-201ENST00000384955 97 ntBASIC-0.26□□□□□ -2.45
LIM2P55344 MIR519E-201ENST00000385075 84 ntBASIC-0.26□□□□□ -2.45
LIM2P55344 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.26□□□□□ -2.45
LIM2P55344 MIR3144-201ENST00000579460 79 ntBASIC-0.26□□□□□ -2.45
LIM2P55344 MIR548AG2-201ENST00000581228 64 ntBASIC-0.26□□□□□ -2.45
LIM2P55344 U7.2-201ENST00000607576 63 ntBASIC-0.26□□□□□ -2.45
LIM2P55344 AC069503.3-201ENST00000618674 145 ntBASIC-0.26□□□□□ -2.45
LIM2P55344 MIR6514-201ENST00000622549 70 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 196.1 ms