Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.41□□□□□ -2.34
CDH11P55287 Y_RNA.549-201ENST00000384657 102 ntBASIC0.41□□□□□ -2.34
CDH11P55287 MIR635-201ENST00000384830 98 ntBASIC0.41□□□□□ -2.34
CDH11P55287 RNA5SP193-201ENST00000410353 107 ntBASIC0.41□□□□□ -2.34
CDH11P55287 Y_RNA.649-201ENST00000459077 103 ntBASIC0.41□□□□□ -2.34
CDH11P55287 RNA5SP268-201ENST00000516828 124 ntBASIC0.41□□□□□ -2.34
CDH11P55287 AC007012.1-201ENST00000567192 175 ntBASIC0.41□□□□□ -2.34
CDH11P55287 MIR3910-1-201ENST00000580936 111 ntBASIC0.41□□□□□ -2.34
CDH11P55287 SNORA25.18-201ENST00000607153 114 ntBASIC0.41□□□□□ -2.34
CDH11P55287 RNU7-10P-201ENST00000607194 63 ntBASIC0.41□□□□□ -2.34
CDH11P55287 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
CDH11P55287 SNORD44.1-201ENST00000363202 61 ntBASIC0.4□□□□□ -2.35
CDH11P55287 Y_RNA.205-201ENST00000364128 113 ntBASIC0.4□□□□□ -2.35
CDH11P55287 Y_RNA.247-201ENST00000364500 92 ntBASIC0.4□□□□□ -2.35
CDH11P55287 RNU6-409P-201ENST00000384114 104 ntBASIC0.4□□□□□ -2.35
CDH11P55287 AL603908.1-201ENST00000406098 201 ntBASIC0.4□□□□□ -2.35
CDH11P55287 RNU6-1333P-201ENST00000516162 93 ntBASIC0.4□□□□□ -2.35
CDH11P55287 MIR7107-201ENST00000611489 80 ntBASIC0.4□□□□□ -2.35
CDH11P55287 AC243829.6-201ENST00000612652 106 ntBASIC0.4□□□□□ -2.35
CDH11P55287 AC010487.4-201ENST00000637027 61 ntBASIC0.4□□□□□ -2.35
CDH11P55287 MIRLET7D-201ENST00000362263 87 ntBASIC0.39□□□□□ -2.35
CDH11P55287 Y_RNA.35-201ENST00000362601 101 ntBASIC0.39□□□□□ -2.35
CDH11P55287 RNA5SP403-201ENST00000363598 108 ntBASIC0.39□□□□□ -2.35
CDH11P55287 Y_RNA.261-201ENST00000364631 102 ntBASIC0.39□□□□□ -2.35
CDH11P55287 RNU6-1201P-201ENST00000384227 107 ntBASIC0.39□□□□□ -2.35
CDH11P55287 Y_RNA.507-201ENST00000384500 99 ntBASIC0.39□□□□□ -2.35
CDH11P55287 RNU6-816P-201ENST00000390914 107 ntBASIC0.39□□□□□ -2.35
CDH11P55287 RNU6-1268P-201ENST00000391214 107 ntBASIC0.39□□□□□ -2.35
CDH11P55287 RNU6-1239P-201ENST00000391310 107 ntBASIC0.39□□□□□ -2.35
CDH11P55287 MIR1912-201ENST00000410389 80 ntBASIC0.39□□□□□ -2.35
CDH11P55287 SNORD63B-201ENST00000411005 70 ntBASIC0.39□□□□□ -2.35
CDH11P55287 RNU6-850P-201ENST00000516934 103 ntBASIC0.39□□□□□ -2.35
CDH11P55287 RNU7-161P-201ENST00000517289 62 ntBASIC0.39□□□□□ -2.35
CDH11P55287 RNU6-170P-201ENST00000362832 104 ntBASIC0.38□□□□□ -2.35
CDH11P55287 SNORD115-24-201ENST00000363528 82 ntBASIC0.38□□□□□ -2.35
CDH11P55287 SNORD113-1-201ENST00000365321 69 ntBASIC0.38□□□□□ -2.35
CDH11P55287 MIR548A1-201ENST00000385041 97 ntBASIC0.38□□□□□ -2.35
CDH11P55287 AC097635.1-201ENST00000450678 155 ntBASIC0.38□□□□□ -2.35
CDH11P55287 RNU7-106P-201ENST00000459514 67 ntBASIC0.38□□□□□ -2.35
CDH11P55287 Y_RNA.155-201ENST00000363632 101 ntBASIC0.37□□□□□ -2.35
CDH11P55287 Y_RNA.173-201ENST00000363776 113 ntBASIC0.37□□□□□ -2.35
CDH11P55287 RNU6-1229P-201ENST00000364295 107 ntBASIC0.37□□□□□ -2.35
CDH11P55287 MIR1273G-201ENST00000577677 100 ntBASIC0.37□□□□□ -2.35
CDH11P55287 AL670379.3-201ENST00000605040 251 ntBASIC0.37□□□□□ -2.35
CDH11P55287 AL365222.1-201ENST00000614661 98 ntBASIC0.37□□□□□ -2.35
CDH11P55287 AL512310.12-203ENST00000640543 90 ntBASIC0.37□□□□□ -2.35
CDH11P55287 AC091304.10-201ENST00000641554 121 ntBASIC0.37□□□□□ -2.35
CDH11P55287 Y_RNA.49-201ENST00000362714 112 ntBASIC0.36□□□□□ -2.35
CDH11P55287 SNORD38.1-201ENST00000363863 68 ntBASIC0.36□□□□□ -2.35
CDH11P55287 RNU6-726P-201ENST00000364680 107 ntBASIC0.36□□□□□ -2.35
CDH11P55287 Y_RNA.309-201ENST00000365046 111 ntBASIC0.36□□□□□ -2.35
CDH11P55287 Y_RNA.342-201ENST00000365352 113 ntBASIC0.36□□□□□ -2.35
CDH11P55287 Y_RNA.377-201ENST00000365644 108 ntBASIC0.36□□□□□ -2.35
CDH11P55287 VTRNA1-3-201ENST00000365645 89 ntBASIC0.36□□□□□ -2.35
CDH11P55287 SNORD38.2-201ENST00000384470 69 ntBASIC0.36□□□□□ -2.35
CDH11P55287 MIR599-201ENST00000385069 95 ntBASIC0.36□□□□□ -2.35
CDH11P55287 MIR577-201ENST00000385196 96 ntBASIC0.36□□□□□ -2.35
CDH11P55287 MIR548A3-201ENST00000385297 97 ntBASIC0.36□□□□□ -2.35
CDH11P55287 AC008267.6-201ENST00000441664 139 ntBASIC0.36□□□□□ -2.35
CDH11P55287 RNU7-195P-201ENST00000458793 62 ntBASIC0.36□□□□□ -2.35
CDH11P55287 AL442128.1-201ENST00000615151 90 ntBASIC0.36□□□□□ -2.35
CDH11P55287 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.36□□□□□ -2.35
CDH11P55287 MIR103A1-201ENST00000362165 78 ntBASIC0.35□□□□□ -2.35
CDH11P55287 Y_RNA.281-201ENST00000364774 94 ntBASIC0.35□□□□□ -2.35
CDH11P55287 RNU6-1126P-201ENST00000384002 107 ntBASIC0.35□□□□□ -2.35
CDH11P55287 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
CDH11P55287 SNORD71-201ENST00000411292 86 ntBASIC0.35□□□□□ -2.35
CDH11P55287 AC068339.1-201ENST00000526965 141 ntBASIC0.35□□□□□ -2.35
CDH11P55287 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.35□□□□□ -2.35
CDH11P55287 RNU6-1260P-201ENST00000362944 107 ntBASIC0.34□□□□□ -2.36
CDH11P55287 U8.6-201ENST00000364939 135 ntBASIC0.34□□□□□ -2.36
CDH11P55287 MIR548G-201ENST00000408442 89 ntBASIC0.34□□□□□ -2.36
CDH11P55287 RNU2-59P-201ENST00000410482 191 ntBASIC0.34□□□□□ -2.36
CDH11P55287 AC069271.1-201ENST00000445577 156 ntBASIC0.34□□□□□ -2.36
CDH11P55287 RNU6-863P-201ENST00000515989 104 ntBASIC0.34□□□□□ -2.36
CDH11P55287 RNA5SP227-201ENST00000516184 113 ntBASIC0.34□□□□□ -2.36
CDH11P55287 MIR4694-201ENST00000578534 80 ntBASIC0.34□□□□□ -2.36
CDH11P55287 AC132825.6-201ENST00000638861 357 ntBASIC0.34□□□□□ -2.36
CDH11P55287 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
CDH11P55287 RNA5SP205-201ENST00000364653 136 ntBASIC0.33□□□□□ -2.36
CDH11P55287 RNU6-22P-201ENST00000384355 107 ntBASIC0.33□□□□□ -2.36
CDH11P55287 MIR516A2-201ENST00000384888 90 ntBASIC0.33□□□□□ -2.36
CDH11P55287 MIR516A1-201ENST00000385033 90 ntBASIC0.33□□□□□ -2.36
CDH11P55287 RNU6-1168P-201ENST00000390831 104 ntBASIC0.33□□□□□ -2.36
CDH11P55287 SNORD41.1-201ENST00000391000 69 ntBASIC0.33□□□□□ -2.36
CDH11P55287 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.33□□□□□ -2.36
CDH11P55287 Y_RNA.809-201ENST00000516058 95 ntBASIC0.33□□□□□ -2.36
CDH11P55287 MTND5P40-201ENST00000559945 246 ntBASIC0.33□□□□□ -2.36
CDH11P55287 MIR5009-201ENST00000578736 100 ntBASIC0.33□□□□□ -2.36
CDH11P55287 RNU6-90P-201ENST00000606352 106 ntBASIC0.33□□□□□ -2.36
CDH11P55287 RNU1-29P-201ENST00000606574 126 ntBASIC0.33□□□□□ -2.36
CDH11P55287 MIR6755-201ENST00000619993 66 ntBASIC0.33□□□□□ -2.36
CDH11P55287 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.33□□□□□ -2.36
CDH11P55287 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.33□□□□□ -2.36
CDH11P55287 AC090625.1-201ENST00000357130 210 ntBASIC0.32□□□□□ -2.36
CDH11P55287 Y_RNA.221-201ENST00000364248 96 ntBASIC0.32□□□□□ -2.36
CDH11P55287 AC108740.1-201ENST00000498629 225 ntBASIC0.32□□□□□ -2.36
CDH11P55287 RNU6-1265P-201ENST00000516342 103 ntBASIC0.32□□□□□ -2.36
CDH11P55287 MIR3613-201ENST00000579844 87 ntBASIC0.32□□□□□ -2.36
CDH11P55287 SNORD36A-201ENST00000362874 73 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms