Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.35□□□□□ -2.47
CDH4P55283 MIR516B1-201ENST00000385211 90 ntBASIC-0.35□□□□□ -2.47
CDH4P55283 MT-TI-201ENST00000387365 69 ntBASIC-0.35□□□□□ -2.47
CDH4P55283 AC093423.1-201ENST00000440817 142 ntBASIC-0.35□□□□□ -2.47
CDH4P55283 RNU7-74P-201ENST00000459104 62 ntBASIC-0.35□□□□□ -2.47
CDH4P55283 RNU6-850P-201ENST00000516934 103 ntBASIC-0.35□□□□□ -2.47
CDH4P55283 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.35□□□□□ -2.47
CDH4P55283 MIR4503-201ENST00000582187 83 ntBASIC-0.35□□□□□ -2.47
CDH4P55283 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.36□□□□□ -2.47
CDH4P55283 MIR519E-201ENST00000385075 84 ntBASIC-0.36□□□□□ -2.47
CDH4P55283 SNORD37.2-201ENST00000391075 66 ntBASIC-0.36□□□□□ -2.47
CDH4P55283 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.36□□□□□ -2.47
CDH4P55283 AC141273.2-201ENST00000618989 130 ntBASIC-0.36□□□□□ -2.47
CDH4P55283 SNORD115-19-201ENST00000363098 82 ntBASIC-0.37□□□□□ -2.47
CDH4P55283 SNORD115-18-201ENST00000363293 82 ntBASIC-0.37□□□□□ -2.47
CDH4P55283 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.37□□□□□ -2.47
CDH4P55283 SNORD115-17-201ENST00000364612 82 ntBASIC-0.37□□□□□ -2.47
CDH4P55283 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.37□□□□□ -2.47
CDH4P55283 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.37□□□□□ -2.47
CDH4P55283 IGLVI-20-201ENST00000519296 130 ntBASIC-0.37□□□□□ -2.47
CDH4P55283 IGKV1-22-201ENST00000524313 326 ntBASIC-0.37□□□□□ -2.47
CDH4P55283 MIR4802-201ENST00000581881 80 ntBASIC-0.37□□□□□ -2.47
CDH4P55283 AC072026.1-201ENST00000605023 201 ntBASIC-0.37□□□□□ -2.47
CDH4P55283 RN7SL660P-201ENST00000614852 299 ntBASIC-0.37□□□□□ -2.47
CDH4P55283 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.38□□□□□ -2.47
CDH4P55283 MIR516A2-201ENST00000384888 90 ntBASIC-0.38□□□□□ -2.47
CDH4P55283 MIR617-201ENST00000385030 97 ntBASIC-0.38□□□□□ -2.47
CDH4P55283 MIR516A1-201ENST00000385033 90 ntBASIC-0.38□□□□□ -2.47
CDH4P55283 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.38□□□□□ -2.47
CDH4P55283 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.38□□□□□ -2.47
CDH4P55283 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.38□□□□□ -2.47
CDH4P55283 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.38□□□□□ -2.47
CDH4P55283 RNU6-521P-201ENST00000516663 105 ntBASIC-0.38□□□□□ -2.47
CDH4P55283 RNU7-6P-201ENST00000516845 62 ntBASIC-0.38□□□□□ -2.47
CDH4P55283 MIR3666-201ENST00000607845 111 ntBASIC-0.38□□□□□ -2.47
CDH4P55283 MIR655-201ENST00000362159 97 ntBASIC-0.39□□□□□ -2.47
CDH4P55283 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.39□□□□□ -2.47
CDH4P55283 SNORD49B-201ENST00000365172 72 ntBASIC-0.39□□□□□ -2.47
CDH4P55283 RNA5SP300-201ENST00000391197 107 ntBASIC-0.39□□□□□ -2.47
CDH4P55283 MIR1912-201ENST00000410389 80 ntBASIC-0.39□□□□□ -2.47
CDH4P55283 RNU7-197P-201ENST00000458836 62 ntBASIC-0.39□□□□□ -2.47
CDH4P55283 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.39□□□□□ -2.47
CDH4P55283 RNU6-320P-201ENST00000516511 106 ntBASIC-0.39□□□□□ -2.47
CDH4P55283 MIR3121-201ENST00000579680 77 ntBASIC-0.39□□□□□ -2.47
CDH4P55283 MIR6507-201ENST00000613630 70 ntBASIC-0.39□□□□□ -2.47
CDH4P55283 AC069503.3-201ENST00000618674 145 ntBASIC-0.39□□□□□ -2.47
CDH4P55283 RNU6-694P-201ENST00000364071 147 ntBASIC-0.4□□□□□ -2.47
CDH4P55283 SNORD115-44-201ENST00000365391 82 ntBASIC-0.4□□□□□ -2.47
CDH4P55283 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.4□□□□□ -2.47
CDH4P55283 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.4□□□□□ -2.47
CDH4P55283 RNU6-574P-201ENST00000384265 107 ntBASIC-0.4□□□□□ -2.47
CDH4P55283 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.4□□□□□ -2.47
CDH4P55283 MTND3P2-201ENST00000438452 342 ntBASIC-0.4□□□□□ -2.47
CDH4P55283 MIR4636-201ENST00000582271 80 ntBASIC-0.4□□□□□ -2.47
CDH4P55283 MIR4473-201ENST00000583731 91 ntBASIC-0.4□□□□□ -2.47
CDH4P55283 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.4□□□□□ -2.47
CDH4P55283 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.41□□□□□ -2.48
CDH4P55283 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.41□□□□□ -2.48
CDH4P55283 AC244250.2-201ENST00000418731 148 ntBASIC-0.41□□□□□ -2.48
CDH4P55283 MIR4645-201ENST00000583158 77 ntBASIC-0.41□□□□□ -2.48
CDH4P55283 MIR1255B1-201ENST00000636325 63 ntBASIC-0.41□□□□□ -2.48
CDH4P55283 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.42□□□□□ -2.48
CDH4P55283 U8.6-201ENST00000364939 135 ntBASIC-0.42□□□□□ -2.48
CDH4P55283 RNU6-811P-201ENST00000384069 107 ntBASIC-0.42□□□□□ -2.48
CDH4P55283 RNU6-196P-201ENST00000384315 107 ntBASIC-0.42□□□□□ -2.48
CDH4P55283 MIR181B2-201ENST00000385004 89 ntBASIC-0.42□□□□□ -2.48
CDH4P55283 RNU7-188P-201ENST00000517063 64 ntBASIC-0.42□□□□□ -2.48
CDH4P55283 MIR5589-201ENST00000579442 60 ntBASIC-0.42□□□□□ -2.48
CDH4P55283 YWHAEP2-201ENST00000580066 112 ntBASIC-0.42□□□□□ -2.48
CDH4P55283 MIR3163-201ENST00000581592 73 ntBASIC-0.42□□□□□ -2.48
CDH4P55283 AC021753.1-201ENST00000635724 168 ntBASIC-0.42□□□□□ -2.48
CDH4P55283 SNORD114-28-201ENST00000363610 72 ntBASIC-0.43□□□□□ -2.48
CDH4P55283 RNU4-11P-201ENST00000365287 132 ntBASIC-0.43□□□□□ -2.48
CDH4P55283 MIR2113-201ENST00000459007 91 ntBASIC-0.43□□□□□ -2.48
CDH4P55283 RNU6-287P-201ENST00000516230 98 ntBASIC-0.43□□□□□ -2.48
CDH4P55283 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.43□□□□□ -2.48
CDH4P55283 SNORA81.3-201ENST00000517283 198 ntBASIC-0.43□□□□□ -2.48
CDH4P55283 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.43□□□□□ -2.48
CDH4P55283 AP002392.1-201ENST00000537692 208 ntBASIC-0.43□□□□□ -2.48
CDH4P55283 MIR548AE1-201ENST00000583292 70 ntBASIC-0.43□□□□□ -2.48
CDH4P55283 uc_338.10-201ENST00000621872 182 ntBASIC-0.43□□□□□ -2.48
CDH4P55283 RNU6-682P-201ENST00000363843 106 ntBASIC-0.44□□□□□ -2.48
CDH4P55283 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.44□□□□□ -2.48
CDH4P55283 RNA5SP205-201ENST00000364653 136 ntBASIC-0.44□□□□□ -2.48
CDH4P55283 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.44□□□□□ -2.48
CDH4P55283 SNORD14C-201ENST00000365382 88 ntBASIC-0.44□□□□□ -2.48
CDH4P55283 SNORA51.5-201ENST00000384126 131 ntBASIC-0.44□□□□□ -2.48
CDH4P55283 SNORD38.2-201ENST00000384470 69 ntBASIC-0.44□□□□□ -2.48
CDH4P55283 RNU6-460P-201ENST00000391158 108 ntBASIC-0.44□□□□□ -2.48
CDH4P55283 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.44□□□□□ -2.48
CDH4P55283 RNU6-861P-201ENST00000516745 106 ntBASIC-0.44□□□□□ -2.48
CDH4P55283 AP001180.6-201ENST00000584918 159 ntBASIC-0.44□□□□□ -2.48
CDH4P55283 AL162726.3-218ENST00000636401 95 ntBASIC-0.44□□□□□ -2.48
CDH4P55283 SNORD36A-201ENST00000362874 73 ntBASIC-0.45□□□□□ -2.48
CDH4P55283 RNA5SP275-201ENST00000363936 118 ntBASIC-0.45□□□□□ -2.48
CDH4P55283 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.45□□□□□ -2.48
CDH4P55283 RNU6-735P-201ENST00000410612 107 ntBASIC-0.45□□□□□ -2.48
CDH4P55283 AC096531.1-201ENST00000419107 107 ntBASIC-0.45□□□□□ -2.48
CDH4P55283 AL161932.1-201ENST00000437408 146 ntBASIC-0.45□□□□□ -2.48
CDH4P55283 RNU7-120P-201ENST00000459334 63 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms