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Protein–RNA interactions for Protein: P55283
CDH4, Cadherin-4, human
Predictions only
Length
916 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
CDH4
P55283
RNU6-1011P-201
ENST00000384668
107 nt
BASIC
-0.35
□□□□□ -2.47
CDH4
P55283
MIR516B1-201
ENST00000385211
90 nt
BASIC
-0.35
□□□□□ -2.47
CDH4
P55283
MT-TI-201
ENST00000387365
69 nt
BASIC
-0.35
□□□□□ -2.47
CDH4
P55283
AC093423.1-201
ENST00000440817
142 nt
BASIC
-0.35
□□□□□ -2.47
CDH4
P55283
RNU7-74P-201
ENST00000459104
62 nt
BASIC
-0.35
□□□□□ -2.47
CDH4
P55283
RNU6-850P-201
ENST00000516934
103 nt
BASIC
-0.35
□□□□□ -2.47
CDH4
P55283
AC107958.3-201
ENST00000553410
431 nt
TSL 3
BASIC
-0.35
□□□□□ -2.47
CDH4
P55283
MIR4503-201
ENST00000582187
83 nt
BASIC
-0.35
□□□□□ -2.47
CDH4
P55283
Y_RNA.342-201
ENST00000365352
113 nt
BASIC
-0.36
□□□□□ -2.47
CDH4
P55283
MIR519E-201
ENST00000385075
84 nt
BASIC
-0.36
□□□□□ -2.47
CDH4
P55283
SNORD37.2-201
ENST00000391075
66 nt
BASIC
-0.36
□□□□□ -2.47
CDH4
P55283
Y_RNA.773-201
ENST00000607168
90 nt
BASIC
-0.36
□□□□□ -2.47
CDH4
P55283
AC141273.2-201
ENST00000618989
130 nt
BASIC
-0.36
□□□□□ -2.47
CDH4
P55283
SNORD115-19-201
ENST00000363098
82 nt
BASIC
-0.37
□□□□□ -2.47
CDH4
P55283
SNORD115-18-201
ENST00000363293
82 nt
BASIC
-0.37
□□□□□ -2.47
CDH4
P55283
Y_RNA.193-201
ENST00000363979
102 nt
BASIC
-0.37
□□□□□ -2.47
CDH4
P55283
SNORD115-17-201
ENST00000364612
82 nt
BASIC
-0.37
□□□□□ -2.47
CDH4
P55283
RNU6ATAC41P-201
ENST00000408600
126 nt
BASIC
-0.37
□□□□□ -2.47
CDH4
P55283
AL357793.1-201
ENST00000448412
401 nt
TSL 5
BASIC
-0.37
□□□□□ -2.47
CDH4
P55283
IGLVI-20-201
ENST00000519296
130 nt
BASIC
-0.37
□□□□□ -2.47
CDH4
P55283
IGKV1-22-201
ENST00000524313
326 nt
BASIC
-0.37
□□□□□ -2.47
CDH4
P55283
MIR4802-201
ENST00000581881
80 nt
BASIC
-0.37
□□□□□ -2.47
CDH4
P55283
AC072026.1-201
ENST00000605023
201 nt
BASIC
-0.37
□□□□□ -2.47
CDH4
P55283
RN7SL660P-201
ENST00000614852
299 nt
BASIC
-0.37
□□□□□ -2.47
CDH4
P55283
Y_RNA.185-201
ENST00000363894
100 nt
BASIC
-0.38
□□□□□ -2.47
CDH4
P55283
MIR516A2-201
ENST00000384888
90 nt
BASIC
-0.38
□□□□□ -2.47
CDH4
P55283
MIR617-201
ENST00000385030
97 nt
BASIC
-0.38
□□□□□ -2.47
CDH4
P55283
MIR516A1-201
ENST00000385033
90 nt
BASIC
-0.38
□□□□□ -2.47
CDH4
P55283
Y_RNA.644-201
ENST00000459006
113 nt
BASIC
-0.38
□□□□□ -2.47
CDH4
P55283
RNU6-1045P-201
ENST00000516321
107 nt
BASIC
-0.38
□□□□□ -2.47
CDH4
P55283
Y_RNA.674-201
ENST00000516362
113 nt
BASIC
-0.38
□□□□□ -2.47
CDH4
P55283
SCARNA15.1-201
ENST00000516384
125 nt
BASIC
-0.38
□□□□□ -2.47
CDH4
P55283
RNU6-521P-201
ENST00000516663
105 nt
BASIC
-0.38
□□□□□ -2.47
CDH4
P55283
RNU7-6P-201
ENST00000516845
62 nt
BASIC
-0.38
□□□□□ -2.47
CDH4
P55283
MIR3666-201
ENST00000607845
111 nt
BASIC
-0.38
□□□□□ -2.47
CDH4
P55283
MIR655-201
ENST00000362159
97 nt
BASIC
-0.39
□□□□□ -2.47
CDH4
P55283
Y_RNA.240-201
ENST00000364469
95 nt
BASIC
-0.39
□□□□□ -2.47
CDH4
P55283
SNORD49B-201
ENST00000365172
72 nt
BASIC
-0.39
□□□□□ -2.47
CDH4
P55283
RNA5SP300-201
ENST00000391197
107 nt
BASIC
-0.39
□□□□□ -2.47
CDH4
P55283
MIR1912-201
ENST00000410389
80 nt
BASIC
-0.39
□□□□□ -2.47
CDH4
P55283
RNU7-197P-201
ENST00000458836
62 nt
BASIC
-0.39
□□□□□ -2.47
CDH4
P55283
RNU5E-3P-201
ENST00000515913
68 nt
BASIC
-0.39
□□□□□ -2.47
CDH4
P55283
RNU6-320P-201
ENST00000516511
106 nt
BASIC
-0.39
□□□□□ -2.47
CDH4
P55283
MIR3121-201
ENST00000579680
77 nt
BASIC
-0.39
□□□□□ -2.47
CDH4
P55283
MIR6507-201
ENST00000613630
70 nt
BASIC
-0.39
□□□□□ -2.47
CDH4
P55283
AC069503.3-201
ENST00000618674
145 nt
BASIC
-0.39
□□□□□ -2.47
CDH4
P55283
RNU6-694P-201
ENST00000364071
147 nt
BASIC
-0.4
□□□□□ -2.47
CDH4
P55283
SNORD115-44-201
ENST00000365391
82 nt
BASIC
-0.4
□□□□□ -2.47
CDH4
P55283
Y_RNA.441-201
ENST00000384123
112 nt
BASIC
-0.4
□□□□□ -2.47
CDH4
P55283
Y_RNA.452-201
ENST00000384202
108 nt
BASIC
-0.4
□□□□□ -2.47
CDH4
P55283
RNU6-574P-201
ENST00000384265
107 nt
BASIC
-0.4
□□□□□ -2.47
CDH4
P55283
Y_RNA.549-201
ENST00000384657
102 nt
BASIC
-0.4
□□□□□ -2.47
CDH4
P55283
MTND3P2-201
ENST00000438452
342 nt
BASIC
-0.4
□□□□□ -2.47
CDH4
P55283
MIR4636-201
ENST00000582271
80 nt
BASIC
-0.4
□□□□□ -2.47
CDH4
P55283
MIR4473-201
ENST00000583731
91 nt
BASIC
-0.4
□□□□□ -2.47
CDH4
P55283
ST7-AS2_1.1-201
ENST00000622900
72 nt
BASIC
-0.4
□□□□□ -2.47
CDH4
P55283
Y_RNA.297-201
ENST00000364950
91 nt
BASIC
-0.41
□□□□□ -2.48
CDH4
P55283
RNU6-1135P-201
ENST00000411083
103 nt
BASIC
-0.41
□□□□□ -2.48
CDH4
P55283
AC244250.2-201
ENST00000418731
148 nt
BASIC
-0.41
□□□□□ -2.48
CDH4
P55283
MIR4645-201
ENST00000583158
77 nt
BASIC
-0.41
□□□□□ -2.48
CDH4
P55283
MIR1255B1-201
ENST00000636325
63 nt
BASIC
-0.41
□□□□□ -2.48
CDH4
P55283
Y_RNA.162-201
ENST00000363683
102 nt
BASIC
-0.42
□□□□□ -2.48
CDH4
P55283
U8.6-201
ENST00000364939
135 nt
BASIC
-0.42
□□□□□ -2.48
CDH4
P55283
RNU6-811P-201
ENST00000384069
107 nt
BASIC
-0.42
□□□□□ -2.48
CDH4
P55283
RNU6-196P-201
ENST00000384315
107 nt
BASIC
-0.42
□□□□□ -2.48
CDH4
P55283
MIR181B2-201
ENST00000385004
89 nt
BASIC
-0.42
□□□□□ -2.48
CDH4
P55283
RNU7-188P-201
ENST00000517063
64 nt
BASIC
-0.42
□□□□□ -2.48
CDH4
P55283
MIR5589-201
ENST00000579442
60 nt
BASIC
-0.42
□□□□□ -2.48
CDH4
P55283
YWHAEP2-201
ENST00000580066
112 nt
BASIC
-0.42
□□□□□ -2.48
CDH4
P55283
MIR3163-201
ENST00000581592
73 nt
BASIC
-0.42
□□□□□ -2.48
CDH4
P55283
AC021753.1-201
ENST00000635724
168 nt
BASIC
-0.42
□□□□□ -2.48
CDH4
P55283
SNORD114-28-201
ENST00000363610
72 nt
BASIC
-0.43
□□□□□ -2.48
CDH4
P55283
RNU4-11P-201
ENST00000365287
132 nt
BASIC
-0.43
□□□□□ -2.48
CDH4
P55283
MIR2113-201
ENST00000459007
91 nt
BASIC
-0.43
□□□□□ -2.48
CDH4
P55283
RNU6-287P-201
ENST00000516230
98 nt
BASIC
-0.43
□□□□□ -2.48
CDH4
P55283
RNU6-1006P-201
ENST00000516998
103 nt
BASIC
-0.43
□□□□□ -2.48
CDH4
P55283
SNORA81.3-201
ENST00000517283
198 nt
BASIC
-0.43
□□□□□ -2.48
CDH4
P55283
AC040936.1-201
ENST00000534543
172 nt
TSL 5
BASIC
-0.43
□□□□□ -2.48
CDH4
P55283
AP002392.1-201
ENST00000537692
208 nt
BASIC
-0.43
□□□□□ -2.48
CDH4
P55283
MIR548AE1-201
ENST00000583292
70 nt
BASIC
-0.43
□□□□□ -2.48
CDH4
P55283
uc_338.10-201
ENST00000621872
182 nt
BASIC
-0.43
□□□□□ -2.48
CDH4
P55283
RNU6-682P-201
ENST00000363843
106 nt
BASIC
-0.44
□□□□□ -2.48
CDH4
P55283
RNU6-1163P-201
ENST00000364516
107 nt
BASIC
-0.44
□□□□□ -2.48
CDH4
P55283
RNA5SP205-201
ENST00000364653
136 nt
BASIC
-0.44
□□□□□ -2.48
CDH4
P55283
Y_RNA.272-201
ENST00000364696
102 nt
BASIC
-0.44
□□□□□ -2.48
CDH4
P55283
SNORD14C-201
ENST00000365382
88 nt
BASIC
-0.44
□□□□□ -2.48
CDH4
P55283
SNORA51.5-201
ENST00000384126
131 nt
BASIC
-0.44
□□□□□ -2.48
CDH4
P55283
SNORD38.2-201
ENST00000384470
69 nt
BASIC
-0.44
□□□□□ -2.48
CDH4
P55283
RNU6-460P-201
ENST00000391158
108 nt
BASIC
-0.44
□□□□□ -2.48
CDH4
P55283
RNU6-1254P-201
ENST00000391266
104 nt
BASIC
-0.44
□□□□□ -2.48
CDH4
P55283
RNU6-861P-201
ENST00000516745
106 nt
BASIC
-0.44
□□□□□ -2.48
CDH4
P55283
AP001180.6-201
ENST00000584918
159 nt
BASIC
-0.44
□□□□□ -2.48
CDH4
P55283
AL162726.3-218
ENST00000636401
95 nt
BASIC
-0.44
□□□□□ -2.48
CDH4
P55283
SNORD36A-201
ENST00000362874
73 nt
BASIC
-0.45
□□□□□ -2.48
CDH4
P55283
RNA5SP275-201
ENST00000363936
118 nt
BASIC
-0.45
□□□□□ -2.48
CDH4
P55283
Y_RNA.433-201
ENST00000384089
102 nt
BASIC
-0.45
□□□□□ -2.48
CDH4
P55283
RNU6-735P-201
ENST00000410612
107 nt
BASIC
-0.45
□□□□□ -2.48
CDH4
P55283
AC096531.1-201
ENST00000419107
107 nt
BASIC
-0.45
□□□□□ -2.48
CDH4
P55283
AL161932.1-201
ENST00000437408
146 nt
BASIC
-0.45
□□□□□ -2.48
CDH4
P55283
RNU7-120P-201
ENST00000459334
63 nt
BASIC
-0.45
□□□□□ -2.48
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Retrieved 100 of 98,524 protein–RNA pairs in 166 ms