Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AP001318.4-201ENST00000616637 121 ntBASIC0.7□□□□□ -2.3
CLK1P49759 SNORD45B-201ENST00000364617 72 ntBASIC0.69□□□□□ -2.3
CLK1P49759 RNU6-32P-201ENST00000383948 107 ntBASIC0.69□□□□□ -2.3
CLK1P49759 RNU6-13P-201ENST00000384248 107 ntBASIC0.69□□□□□ -2.3
CLK1P49759 RNU6-12P-201ENST00000384604 107 ntBASIC0.69□□□□□ -2.3
CLK1P49759 Y_RNA.536-201ENST00000384621 113 ntBASIC0.69□□□□□ -2.3
CLK1P49759 RNU6-41P-201ENST00000384741 107 ntBASIC0.69□□□□□ -2.3
CLK1P49759 MIR520E-201ENST00000384867 87 ntBASIC0.69□□□□□ -2.3
CLK1P49759 RNU6-448P-201ENST00000517052 107 ntBASIC0.69□□□□□ -2.3
CLK1P49759 MIR4698-201ENST00000577795 80 ntBASIC0.69□□□□□ -2.3
CLK1P49759 MIR4439-201ENST00000583746 80 ntBASIC0.69□□□□□ -2.3
CLK1P49759 AC096720.1-201ENST00000604441 183 ntBASIC0.69□□□□□ -2.3
CLK1P49759 RNU6-90P-201ENST00000606352 106 ntBASIC0.69□□□□□ -2.3
CLK1P49759 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CLK1P49759 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CLK1P49759 RNU6-640P-201ENST00000363693 105 ntBASIC0.68□□□□□ -2.3
CLK1P49759 RNA5SP245-201ENST00000364239 121 ntBASIC0.68□□□□□ -2.3
CLK1P49759 Y_RNA.467-201ENST00000384297 102 ntBASIC0.68□□□□□ -2.3
CLK1P49759 RNU6-905P-201ENST00000384434 107 ntBASIC0.68□□□□□ -2.3
CLK1P49759 Y_RNA.544-201ENST00000384650 113 ntBASIC0.68□□□□□ -2.3
CLK1P49759 Y_RNA.567-201ENST00000384736 106 ntBASIC0.68□□□□□ -2.3
CLK1P49759 MIR573-201ENST00000384964 99 ntBASIC0.68□□□□□ -2.3
CLK1P49759 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.68□□□□□ -2.3
CLK1P49759 RNA5SP89-201ENST00000410300 108 ntBASIC0.68□□□□□ -2.3
CLK1P49759 SPINT5P-201ENST00000448174 155 ntBASIC0.68□□□□□ -2.3
CLK1P49759 RNU6-168P-201ENST00000516189 101 ntBASIC0.68□□□□□ -2.3
CLK1P49759 Y_RNA.697-201ENST00000516776 113 ntBASIC0.68□□□□□ -2.3
CLK1P49759 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.68□□□□□ -2.3
CLK1P49759 Y_RNA.32-201ENST00000362589 110 ntBASIC0.67□□□□□ -2.3
CLK1P49759 Y_RNA.56-201ENST00000362798 112 ntBASIC0.67□□□□□ -2.3
CLK1P49759 Y_RNA.93-201ENST00000363066 109 ntBASIC0.67□□□□□ -2.3
CLK1P49759 Y_RNA.107-201ENST00000363190 121 ntBASIC0.67□□□□□ -2.3
CLK1P49759 MTATP6P29-201ENST00000415057 132 ntBASIC0.67□□□□□ -2.3
CLK1P49759 MTATP8P2-201ENST00000435212 202 ntBASIC0.67□□□□□ -2.3
CLK1P49759 AC002350.1-201ENST00000490759 375 ntBASIC0.67□□□□□ -2.3
CLK1P49759 TRAJ51-201ENST00000504127 63 ntBASIC0.67□□□□□ -2.3
CLK1P49759 RNU4-54P-201ENST00000516428 129 ntBASIC0.67□□□□□ -2.3
CLK1P49759 MTND5P40-201ENST00000559945 246 ntBASIC0.67□□□□□ -2.3
CLK1P49759 uc_338.16-201ENST00000621804 95 ntBASIC0.67□□□□□ -2.3
CLK1P49759 SNORA25.9-201ENST00000365087 128 ntBASIC0.66□□□□□ -2.3
CLK1P49759 RNU6-535P-201ENST00000384722 107 ntBASIC0.66□□□□□ -2.3
CLK1P49759 MIR519A1-201ENST00000385257 85 ntBASIC0.66□□□□□ -2.3
CLK1P49759 RNU6-644P-201ENST00000391155 98 ntBASIC0.66□□□□□ -2.3
CLK1P49759 SNORD99-201ENST00000408612 74 ntBASIC0.66□□□□□ -2.3
CLK1P49759 AC244098.3-201ENST00000424803 96 ntBASIC0.66□□□□□ -2.3
CLK1P49759 AC092628.1-201ENST00000436250 252 ntBASIC0.66□□□□□ -2.3
CLK1P49759 SNORA31.14-201ENST00000516728 116 ntBASIC0.66□□□□□ -2.3
CLK1P49759 AC018659.1-201ENST00000551083 169 ntBASIC0.66□□□□□ -2.3
CLK1P49759 RNU6-86P-201ENST00000606534 107 ntBASIC0.66□□□□□ -2.3
CLK1P49759 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.66□□□□□ -2.3
CLK1P49759 MIR101-2-201ENST00000362195 79 ntBASIC0.65□□□□□ -2.31
CLK1P49759 Y_RNA.191-201ENST00000363972 113 ntBASIC0.65□□□□□ -2.31
CLK1P49759 Y_RNA.342-201ENST00000365352 113 ntBASIC0.65□□□□□ -2.31
CLK1P49759 SNORD114-22-201ENST00000365423 72 ntBASIC0.65□□□□□ -2.31
CLK1P49759 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CLK1P49759 RNU6-813P-201ENST00000384691 107 ntBASIC0.65□□□□□ -2.31
CLK1P49759 SNORD63B-201ENST00000411005 70 ntBASIC0.65□□□□□ -2.31
CLK1P49759 RNU7-106P-201ENST00000459514 67 ntBASIC0.65□□□□□ -2.31
CLK1P49759 MIR548H5-201ENST00000580314 60 ntBASIC0.65□□□□□ -2.31
CLK1P49759 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
CLK1P49759 Y_RNA.164-201ENST00000363709 102 ntBASIC0.64□□□□□ -2.31
CLK1P49759 MIR516A2-201ENST00000384888 90 ntBASIC0.64□□□□□ -2.31
CLK1P49759 MIR516A1-201ENST00000385033 90 ntBASIC0.64□□□□□ -2.31
CLK1P49759 AC244505.6-201ENST00000452829 130 ntBASIC0.64□□□□□ -2.31
CLK1P49759 RNU7-61P-201ENST00000515897 61 ntBASIC0.64□□□□□ -2.31
CLK1P49759 Y_RNA.677-201ENST00000516401 85 ntBASIC0.64□□□□□ -2.31
CLK1P49759 CYP3A137P-201ENST00000562436 69 ntBASIC0.64□□□□□ -2.31
CLK1P49759 MIR3612-201ENST00000579753 87 ntBASIC0.64□□□□□ -2.31
CLK1P49759 AC103810.7-201ENST00000607821 91 ntBASIC0.64□□□□□ -2.31
CLK1P49759 AC025521.1-201ENST00000621624 286 ntBASIC0.64□□□□□ -2.31
CLK1P49759 MIR488-201ENST00000365739 83 ntBASIC0.63□□□□□ -2.31
CLK1P49759 MIR499A-201ENST00000384903 122 ntBASIC0.63□□□□□ -2.31
CLK1P49759 MIR181B2-201ENST00000385004 89 ntBASIC0.63□□□□□ -2.31
CLK1P49759 SNORA40.13-201ENST00000516379 120 ntBASIC0.63□□□□□ -2.31
CLK1P49759 AC011195.1-201ENST00000578177 177 ntBASIC0.63□□□□□ -2.31
CLK1P49759 MIR4452-201ENST00000583004 71 ntBASIC0.63□□□□□ -2.31
CLK1P49759 AL590095.2-201ENST00000604136 117 ntBASIC0.63□□□□□ -2.31
CLK1P49759 RNU7-10P-201ENST00000607194 63 ntBASIC0.63□□□□□ -2.31
CLK1P49759 Y_RNA.57-201ENST00000362806 113 ntBASIC0.62□□□□□ -2.31
CLK1P49759 SNORD36A-201ENST00000362874 73 ntBASIC0.62□□□□□ -2.31
CLK1P49759 Y_RNA.174-201ENST00000363781 105 ntBASIC0.62□□□□□ -2.31
CLK1P49759 MIR635-201ENST00000384830 98 ntBASIC0.62□□□□□ -2.31
CLK1P49759 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.62□□□□□ -2.31
CLK1P49759 RNU7-195P-201ENST00000458793 62 ntBASIC0.62□□□□□ -2.31
CLK1P49759 Y_RNA.705-201ENST00000516862 110 ntBASIC0.62□□□□□ -2.31
CLK1P49759 AL513043.2-201ENST00000573941 143 ntBASIC0.62□□□□□ -2.31
CLK1P49759 RNU6-1298P-201ENST00000362456 101 ntBASIC0.61□□□□□ -2.31
CLK1P49759 RNU6-1260P-201ENST00000362944 107 ntBASIC0.61□□□□□ -2.31
CLK1P49759 RNU6-1125P-201ENST00000363601 107 ntBASIC0.61□□□□□ -2.31
CLK1P49759 Y_RNA.290-201ENST00000364879 114 ntBASIC0.61□□□□□ -2.31
CLK1P49759 RNU6-480P-201ENST00000384332 107 ntBASIC0.61□□□□□ -2.31
CLK1P49759 RNU6-972P-201ENST00000391208 107 ntBASIC0.61□□□□□ -2.31
CLK1P49759 RNU6-887P-201ENST00000410660 100 ntBASIC0.61□□□□□ -2.31
CLK1P49759 AC097635.1-201ENST00000450678 155 ntBASIC0.61□□□□□ -2.31
CLK1P49759 AC138907.6-201ENST00000568401 126 ntBASIC0.61□□□□□ -2.31
CLK1P49759 AC138869.1-201ENST00000568623 124 ntBASIC0.61□□□□□ -2.31
CLK1P49759 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
CLK1P49759 MIR18A-201ENST00000362310 71 ntBASIC0.6□□□□□ -2.31
CLK1P49759 SNORD58A-201ENST00000383875 65 ntBASIC0.6□□□□□ -2.31
CLK1P49759 MIR644A-201ENST00000385262 94 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms