Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 SNORA75.1-201ENST00000391130 148 ntBASIC-0.27□□□□□ -2.45
CXCL12P48061 AL603914.1-201ENST00000401964 204 ntBASIC-0.27□□□□□ -2.45
CXCL12P48061 RNU7-106P-201ENST00000459514 67 ntBASIC-0.27□□□□□ -2.45
CXCL12P48061 RNU7-13P-201ENST00000516413 62 ntBASIC-0.27□□□□□ -2.45
CXCL12P48061 RNU7-121P-201ENST00000516604 62 ntBASIC-0.27□□□□□ -2.45
CXCL12P48061 AC130289.1-201ENST00000577321 73 ntBASIC-0.27□□□□□ -2.45
CXCL12P48061 AL670379.3-201ENST00000605040 251 ntBASIC-0.27□□□□□ -2.45
CXCL12P48061 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.27□□□□□ -2.45
CXCL12P48061 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.27□□□□□ -2.45
CXCL12P48061 MIR101-1-201ENST00000362265 75 ntBASIC-0.28□□□□□ -2.45
CXCL12P48061 RNU6-170P-201ENST00000362832 104 ntBASIC-0.28□□□□□ -2.45
CXCL12P48061 RNU4-84P-201ENST00000364200 139 ntBASIC-0.28□□□□□ -2.45
CXCL12P48061 SNORD114-12-201ENST00000365400 75 ntBASIC-0.28□□□□□ -2.45
CXCL12P48061 RNU6-30P-201ENST00000384561 107 ntBASIC-0.28□□□□□ -2.45
CXCL12P48061 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.28□□□□□ -2.45
CXCL12P48061 MIR4503-201ENST00000582187 83 ntBASIC-0.28□□□□□ -2.45
CXCL12P48061 AC108676.2-201ENST00000605225 163 ntBASIC-0.28□□□□□ -2.45
CXCL12P48061 AC084368.1-201ENST00000620935 65 ntBASIC-0.28□□□□□ -2.45
CXCL12P48061 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.29□□□□□ -2.46
CXCL12P48061 MIR34C-201ENST00000384831 77 ntBASIC-0.29□□□□□ -2.46
CXCL12P48061 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.29□□□□□ -2.46
CXCL12P48061 SNORA18.1-201ENST00000363418 128 ntBASIC-0.3□□□□□ -2.46
CXCL12P48061 SNORD114-28-201ENST00000363610 72 ntBASIC-0.3□□□□□ -2.46
CXCL12P48061 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.3□□□□□ -2.46
CXCL12P48061 RNU6-694P-201ENST00000364071 147 ntBASIC-0.3□□□□□ -2.46
CXCL12P48061 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.3□□□□□ -2.46
CXCL12P48061 RNU6-571P-201ENST00000384128 107 ntBASIC-0.3□□□□□ -2.46
CXCL12P48061 RNU6-574P-201ENST00000384265 107 ntBASIC-0.3□□□□□ -2.46
CXCL12P48061 MIR516B1-201ENST00000385211 90 ntBASIC-0.3□□□□□ -2.46
CXCL12P48061 MIR876-201ENST00000401147 81 ntBASIC-0.3□□□□□ -2.46
CXCL12P48061 SNORD4A-201ENST00000459174 72 ntBASIC-0.3□□□□□ -2.46
CXCL12P48061 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.3□□□□□ -2.46
CXCL12P48061 SNORA25.13-201ENST00000516395 103 ntBASIC-0.3□□□□□ -2.46
CXCL12P48061 RNU7-6P-201ENST00000516845 62 ntBASIC-0.3□□□□□ -2.46
CXCL12P48061 RNU6-850P-201ENST00000516934 103 ntBASIC-0.3□□□□□ -2.46
CXCL12P48061 CR383656.4-201ENST00000546909 122 ntBASIC-0.3□□□□□ -2.46
CXCL12P48061 MTND5P40-201ENST00000559945 246 ntBASIC-0.3□□□□□ -2.46
CXCL12P48061 AC141273.2-201ENST00000618989 130 ntBASIC-0.3□□□□□ -2.46
CXCL12P48061 AC087741.2-201ENST00000619415 172 ntBASIC-0.3□□□□□ -2.46
CXCL12P48061 RNU1-141P-201ENST00000364623 158 ntBASIC-0.31□□□□□ -2.46
CXCL12P48061 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.31□□□□□ -2.46
CXCL12P48061 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.31□□□□□ -2.46
CXCL12P48061 RNU6-46P-201ENST00000383860 107 ntBASIC-0.31□□□□□ -2.46
CXCL12P48061 MT-TI-201ENST00000387365 69 ntBASIC-0.31□□□□□ -2.46
CXCL12P48061 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.31□□□□□ -2.46
CXCL12P48061 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.32□□□□□ -2.46
CXCL12P48061 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.32□□□□□ -2.46
CXCL12P48061 MIR516A2-201ENST00000384888 90 ntBASIC-0.32□□□□□ -2.46
CXCL12P48061 MIR516A1-201ENST00000385033 90 ntBASIC-0.32□□□□□ -2.46
CXCL12P48061 MTND3P2-201ENST00000438452 342 ntBASIC-0.32□□□□□ -2.46
CXCL12P48061 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.32□□□□□ -2.46
CXCL12P48061 RNU7-74P-201ENST00000459104 62 ntBASIC-0.32□□□□□ -2.46
CXCL12P48061 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.32□□□□□ -2.46
CXCL12P48061 MIR548AG2-201ENST00000581228 64 ntBASIC-0.32□□□□□ -2.46
CXCL12P48061 AC072026.1-201ENST00000605023 201 ntBASIC-0.32□□□□□ -2.46
CXCL12P48061 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.32□□□□□ -2.46
CXCL12P48061 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.33□□□□□ -2.46
CXCL12P48061 SNORD95.1-201ENST00000364099 68 ntBASIC-0.33□□□□□ -2.46
CXCL12P48061 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.33□□□□□ -2.46
CXCL12P48061 RNU6-196P-201ENST00000384315 107 ntBASIC-0.33□□□□□ -2.46
CXCL12P48061 RNU6-521P-201ENST00000516663 105 ntBASIC-0.33□□□□□ -2.46
CXCL12P48061 IGKV1-22-201ENST00000524313 326 ntBASIC-0.33□□□□□ -2.46
CXCL12P48061 MIR4473-201ENST00000583731 91 ntBASIC-0.33□□□□□ -2.46
CXCL12P48061 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.33□□□□□ -2.46
CXCL12P48061 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.34□□□□□ -2.46
CXCL12P48061 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.34□□□□□ -2.46
CXCL12P48061 MIR519E-201ENST00000385075 84 ntBASIC-0.34□□□□□ -2.46
CXCL12P48061 RN7SL660P-201ENST00000614852 299 ntBASIC-0.34□□□□□ -2.46
CXCL12P48061 AC021753.1-201ENST00000635724 168 ntBASIC-0.34□□□□□ -2.46
CXCL12P48061 MIR148A-201ENST00000362215 68 ntBASIC-0.35□□□□□ -2.47
CXCL12P48061 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.35□□□□□ -2.47
CXCL12P48061 RNU4-11P-201ENST00000365287 132 ntBASIC-0.35□□□□□ -2.47
CXCL12P48061 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.35□□□□□ -2.47
CXCL12P48061 AC109327.2-201ENST00000448339 378 ntBASIC-0.35□□□□□ -2.47
CXCL12P48061 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.35□□□□□ -2.47
CXCL12P48061 AP002392.1-201ENST00000537692 208 ntBASIC-0.35□□□□□ -2.47
CXCL12P48061 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.35□□□□□ -2.47
CXCL12P48061 SNORD115-19-201ENST00000363098 82 ntBASIC-0.36□□□□□ -2.47
CXCL12P48061 SNORD115-18-201ENST00000363293 82 ntBASIC-0.36□□□□□ -2.47
CXCL12P48061 SNORD115-17-201ENST00000364612 82 ntBASIC-0.36□□□□□ -2.47
CXCL12P48061 SNORD49B-201ENST00000365172 72 ntBASIC-0.36□□□□□ -2.47
CXCL12P48061 MIR617-201ENST00000385030 97 ntBASIC-0.36□□□□□ -2.47
CXCL12P48061 RNU6-460P-201ENST00000391158 108 ntBASIC-0.36□□□□□ -2.47
CXCL12P48061 AC093423.1-201ENST00000440817 142 ntBASIC-0.36□□□□□ -2.47
CXCL12P48061 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.36□□□□□ -2.47
CXCL12P48061 RNU7-197P-201ENST00000458836 62 ntBASIC-0.36□□□□□ -2.47
CXCL12P48061 RNU6-861P-201ENST00000516745 106 ntBASIC-0.36□□□□□ -2.47
CXCL12P48061 MIR3121-201ENST00000579680 77 ntBASIC-0.36□□□□□ -2.47
CXCL12P48061 YWHAEP2-201ENST00000580066 112 ntBASIC-0.36□□□□□ -2.47
CXCL12P48061 MIR1255B1-201ENST00000636325 63 ntBASIC-0.36□□□□□ -2.47
CXCL12P48061 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.36□□□□□ -2.47
CXCL12P48061 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.37□□□□□ -2.47
CXCL12P48061 RNA5SP451-201ENST00000410588 110 ntBASIC-0.37□□□□□ -2.47
CXCL12P48061 RNU7-188P-201ENST00000517063 64 ntBASIC-0.37□□□□□ -2.47
CXCL12P48061 MIR3163-201ENST00000581592 73 ntBASIC-0.37□□□□□ -2.47
CXCL12P48061 AC069503.3-201ENST00000618674 145 ntBASIC-0.37□□□□□ -2.47
CXCL12P48061 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.38□□□□□ -2.47
CXCL12P48061 U8.6-201ENST00000364939 135 ntBASIC-0.38□□□□□ -2.47
CXCL12P48061 RNU6-915P-201ENST00000364943 103 ntBASIC-0.38□□□□□ -2.47
CXCL12P48061 SNORD115-44-201ENST00000365391 82 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 540 ms