Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 uc_338.17-201ENST00000619633 179 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.47□□□□□ -2.33
NKX2-1P43699 Y_RNA.49-201ENST00000362714 112 ntBASIC0.46□□□□□ -2.34
NKX2-1P43699 Y_RNA.173-201ENST00000363776 113 ntBASIC0.46□□□□□ -2.34
NKX2-1P43699 RNU6-1201P-201ENST00000384227 107 ntBASIC0.46□□□□□ -2.34
NKX2-1P43699 RNU6-1144P-201ENST00000384247 104 ntBASIC0.46□□□□□ -2.34
NKX2-1P43699 MIR193B-201ENST00000384907 83 ntBASIC0.46□□□□□ -2.34
NKX2-1P43699 MIR548J-201ENST00000408833 112 ntBASIC0.46□□□□□ -2.34
NKX2-1P43699 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
NKX2-1P43699 SCARNA16.5-201ENST00000517114 183 ntBASIC0.46□□□□□ -2.34
NKX2-1P43699 MIR5009-201ENST00000578736 100 ntBASIC0.46□□□□□ -2.34
NKX2-1P43699 AL365222.1-201ENST00000614661 98 ntBASIC0.46□□□□□ -2.34
NKX2-1P43699 MIR5087-201ENST00000635826 76 ntBASIC0.46□□□□□ -2.34
NKX2-1P43699 RNU6-170P-201ENST00000362832 104 ntBASIC0.45□□□□□ -2.34
NKX2-1P43699 RNU6-1260P-201ENST00000362944 107 ntBASIC0.45□□□□□ -2.34
NKX2-1P43699 SNORD118-201ENST00000363593 134 ntBASIC0.45□□□□□ -2.34
NKX2-1P43699 RNA5SP245-201ENST00000364239 121 ntBASIC0.45□□□□□ -2.34
NKX2-1P43699 Y_RNA.261-201ENST00000364631 102 ntBASIC0.45□□□□□ -2.34
NKX2-1P43699 Y_RNA.342-201ENST00000365352 113 ntBASIC0.45□□□□□ -2.34
NKX2-1P43699 RNY1P8-201ENST00000383970 114 ntBASIC0.45□□□□□ -2.34
NKX2-1P43699 RNU6-880P-201ENST00000384526 107 ntBASIC0.45□□□□□ -2.34
NKX2-1P43699 RNY1P4-201ENST00000384595 115 ntBASIC0.45□□□□□ -2.34
NKX2-1P43699 AC097635.1-201ENST00000450678 155 ntBASIC0.45□□□□□ -2.34
NKX2-1P43699 RN7SL793P-201ENST00000583259 296 ntBASIC0.45□□□□□ -2.34
NKX2-1P43699 AL035470.1-201ENST00000622571 220 ntBASIC0.45□□□□□ -2.34
NKX2-1P43699 SNORA36.1-201ENST00000363424 132 ntBASIC0.44□□□□□ -2.34
NKX2-1P43699 RNA5SP403-201ENST00000363598 108 ntBASIC0.44□□□□□ -2.34
NKX2-1P43699 MIR644A-201ENST00000385262 94 ntBASIC0.44□□□□□ -2.34
NKX2-1P43699 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
NKX2-1P43699 SNORA40.8-201ENST00000411034 126 ntBASIC0.44□□□□□ -2.34
NKX2-1P43699 AC098934.3-201ENST00000430450 190 ntBASIC0.44□□□□□ -2.34
NKX2-1P43699 TRAJ51-201ENST00000504127 63 ntBASIC0.44□□□□□ -2.34
NKX2-1P43699 MIR4714-201ENST00000580728 77 ntBASIC0.44□□□□□ -2.34
NKX2-1P43699 MIR4439-201ENST00000583746 80 ntBASIC0.44□□□□□ -2.34
NKX2-1P43699 RNU6-90P-201ENST00000606352 106 ntBASIC0.44□□□□□ -2.34
NKX2-1P43699 AL512310.12-203ENST00000640543 90 ntBASIC0.44□□□□□ -2.34
NKX2-1P43699 RNY3P2-201ENST00000362918 102 ntBASIC0.43□□□□□ -2.34
NKX2-1P43699 Y_RNA.78-201ENST00000362970 110 ntBASIC0.43□□□□□ -2.34
NKX2-1P43699 Y_RNA.155-201ENST00000363632 101 ntBASIC0.43□□□□□ -2.34
NKX2-1P43699 Y_RNA.205-201ENST00000364128 113 ntBASIC0.43□□□□□ -2.34
NKX2-1P43699 RNA5SP517-201ENST00000364724 117 ntBASIC0.43□□□□□ -2.34
NKX2-1P43699 U8.6-201ENST00000364939 135 ntBASIC0.43□□□□□ -2.34
NKX2-1P43699 SNORD116-21-201ENST00000384507 92 ntBASIC0.43□□□□□ -2.34
NKX2-1P43699 Y_RNA.549-201ENST00000384657 102 ntBASIC0.43□□□□□ -2.34
NKX2-1P43699 MIR548A1-201ENST00000385041 97 ntBASIC0.43□□□□□ -2.34
NKX2-1P43699 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.43□□□□□ -2.34
NKX2-1P43699 SNORA7.5-201ENST00000410672 110 ntBASIC0.43□□□□□ -2.34
NKX2-1P43699 RNU2-51P-201ENST00000410708 197 ntBASIC0.43□□□□□ -2.34
NKX2-1P43699 RNU6-313P-201ENST00000516317 112 ntBASIC0.43□□□□□ -2.34
NKX2-1P43699 RNU6-850P-201ENST00000516934 103 ntBASIC0.43□□□□□ -2.34
NKX2-1P43699 AC092634.7-201ENST00000621022 103 ntBASIC0.43□□□□□ -2.34
NKX2-1P43699 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.43□□□□□ -2.34
NKX2-1P43699 RNU6-1099P-201ENST00000363533 107 ntBASIC0.42□□□□□ -2.34
NKX2-1P43699 Y_RNA.273-201ENST00000364703 102 ntBASIC0.42□□□□□ -2.34
NKX2-1P43699 SNORA8.2-201ENST00000384372 139 ntBASIC0.42□□□□□ -2.34
NKX2-1P43699 RNU6-476P-201ENST00000384726 107 ntBASIC0.42□□□□□ -2.34
NKX2-1P43699 MIR518A1-201ENST00000385068 85 ntBASIC0.42□□□□□ -2.34
NKX2-1P43699 MIR577-201ENST00000385196 96 ntBASIC0.42□□□□□ -2.34
NKX2-1P43699 MIR548G-201ENST00000408442 89 ntBASIC0.42□□□□□ -2.34
NKX2-1P43699 RNU6-1064P-201ENST00000410626 104 ntBASIC0.42□□□□□ -2.34
NKX2-1P43699 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.42□□□□□ -2.34
NKX2-1P43699 MIR1273G-201ENST00000577677 100 ntBASIC0.42□□□□□ -2.34
NKX2-1P43699 AC096720.1-201ENST00000604441 183 ntBASIC0.42□□□□□ -2.34
NKX2-1P43699 AC022709.1-201ENST00000615967 87 ntBASIC0.42□□□□□ -2.34
NKX2-1P43699 MIR6779-201ENST00000617283 64 ntBASIC0.42□□□□□ -2.34
NKX2-1P43699 MIR924-201ENST00000638017 53 ntBASIC0.42□□□□□ -2.34
NKX2-1P43699 AC091304.10-201ENST00000641554 121 ntBASIC0.42□□□□□ -2.34
NKX2-1P43699 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
NKX2-1P43699 RNU6-832P-201ENST00000363319 107 ntBASIC0.41□□□□□ -2.34
NKX2-1P43699 SNORD41.1-201ENST00000391000 69 ntBASIC0.41□□□□□ -2.34
NKX2-1P43699 RNU6-1154P-201ENST00000391001 104 ntBASIC0.41□□□□□ -2.34
NKX2-1P43699 SNORD63B-201ENST00000411005 70 ntBASIC0.41□□□□□ -2.34
NKX2-1P43699 RNU4-61P-201ENST00000411243 107 ntBASIC0.41□□□□□ -2.34
NKX2-1P43699 BX276092.1-201ENST00000427368 251 ntBASIC0.41□□□□□ -2.34
NKX2-1P43699 AC244669.1-204ENST00000621564 178 ntBASIC0.41□□□□□ -2.34
NKX2-1P43699 RNA5SP347-201ENST00000362445 119 ntBASIC0.4□□□□□ -2.35
NKX2-1P43699 SNORD114-23-201ENST00000363536 72 ntBASIC0.4□□□□□ -2.35
NKX2-1P43699 SNORA63.5-201ENST00000363548 123 ntBASIC0.4□□□□□ -2.35
NKX2-1P43699 RNU6-1229P-201ENST00000364295 107 ntBASIC0.4□□□□□ -2.35
NKX2-1P43699 RNU6-1126P-201ENST00000384002 107 ntBASIC0.4□□□□□ -2.35
NKX2-1P43699 SNORA62.5-201ENST00000516634 120 ntBASIC0.4□□□□□ -2.35
NKX2-1P43699 RNA5SP268-201ENST00000516828 124 ntBASIC0.4□□□□□ -2.35
NKX2-1P43699 Y_RNA.10-201ENST00000362371 110 ntBASIC0.39□□□□□ -2.35
NKX2-1P43699 RNA5SP325-201ENST00000363756 130 ntBASIC0.39□□□□□ -2.35
NKX2-1P43699 Y_RNA.247-201ENST00000364500 92 ntBASIC0.39□□□□□ -2.35
NKX2-1P43699 RNU6-1014P-201ENST00000383940 103 ntBASIC0.39□□□□□ -2.35
NKX2-1P43699 RNU6-1056P-201ENST00000383996 107 ntBASIC0.39□□□□□ -2.35
NKX2-1P43699 RNU6-1081P-201ENST00000384537 107 ntBASIC0.39□□□□□ -2.35
NKX2-1P43699 Y_RNA.567-201ENST00000384736 106 ntBASIC0.39□□□□□ -2.35
NKX2-1P43699 SNORD71-201ENST00000411292 86 ntBASIC0.39□□□□□ -2.35
NKX2-1P43699 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.39□□□□□ -2.35
NKX2-1P43699 AL606753.1-201ENST00000427435 87 ntBASIC0.39□□□□□ -2.35
NKX2-1P43699 RNU6-589P-201ENST00000516485 107 ntBASIC0.39□□□□□ -2.35
NKX2-1P43699 RNU7-161P-201ENST00000517289 62 ntBASIC0.39□□□□□ -2.35
NKX2-1P43699 MTND5P40-201ENST00000559945 246 ntBASIC0.39□□□□□ -2.35
NKX2-1P43699 AC010487.4-201ENST00000637027 61 ntBASIC0.39□□□□□ -2.35
NKX2-1P43699 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.39□□□□□ -2.35
NKX2-1P43699 SNORD36A-201ENST00000362874 73 ntBASIC0.38□□□□□ -2.35
NKX2-1P43699 SNORD44.1-201ENST00000363202 61 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 220 ms