Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 RNU6-170P-201ENST00000362832 104 ntBASIC0.41□□□□□ -2.34
APOBEC1P41238 AC098934.3-201ENST00000430450 190 ntBASIC0.41□□□□□ -2.34
APOBEC1P41238 AC008267.6-201ENST00000441664 139 ntBASIC0.41□□□□□ -2.34
APOBEC1P41238 AC097635.1-201ENST00000450678 155 ntBASIC0.41□□□□□ -2.34
APOBEC1P41238 RNA5SP436-201ENST00000516020 115 ntBASIC0.41□□□□□ -2.34
APOBEC1P41238 SNORD33.1-201ENST00000516213 88 ntBASIC0.41□□□□□ -2.34
APOBEC1P41238 AL670379.3-201ENST00000605040 251 ntBASIC0.41□□□□□ -2.34
APOBEC1P41238 RNU6-1099P-201ENST00000363533 107 ntBASIC0.4□□□□□ -2.35
APOBEC1P41238 SNORD38.1-201ENST00000363863 68 ntBASIC0.4□□□□□ -2.35
APOBEC1P41238 MIR548A1-201ENST00000385041 97 ntBASIC0.4□□□□□ -2.35
APOBEC1P41238 AL603908.1-201ENST00000406098 201 ntBASIC0.4□□□□□ -2.35
APOBEC1P41238 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
APOBEC1P41238 SNRPGP12-201ENST00000449481 213 ntBASIC0.4□□□□□ -2.35
APOBEC1P41238 SNORA68.3-201ENST00000515906 83 ntBASIC0.4□□□□□ -2.35
APOBEC1P41238 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
APOBEC1P41238 RNU6-850P-201ENST00000516934 103 ntBASIC0.4□□□□□ -2.35
APOBEC1P41238 Y_RNA.342-201ENST00000365352 113 ntBASIC0.39□□□□□ -2.35
APOBEC1P41238 RNY1P4-201ENST00000384595 115 ntBASIC0.39□□□□□ -2.35
APOBEC1P41238 MIR599-201ENST00000385069 95 ntBASIC0.39□□□□□ -2.35
APOBEC1P41238 MIR519A1-201ENST00000385257 85 ntBASIC0.39□□□□□ -2.35
APOBEC1P41238 SNORD63B-201ENST00000411005 70 ntBASIC0.39□□□□□ -2.35
APOBEC1P41238 SPINT5P-201ENST00000448174 155 ntBASIC0.39□□□□□ -2.35
APOBEC1P41238 RNU6-90P-201ENST00000606352 106 ntBASIC0.39□□□□□ -2.35
APOBEC1P41238 PVT1_3.1-201ENST00000620853 95 ntBASIC0.39□□□□□ -2.35
APOBEC1P41238 AC243829.3-201ENST00000622177 108 ntBASIC0.39□□□□□ -2.35
APOBEC1P41238 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.39□□□□□ -2.35
APOBEC1P41238 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
APOBEC1P41238 MIRLET7D-201ENST00000362263 87 ntBASIC0.38□□□□□ -2.35
APOBEC1P41238 Y_RNA.466-201ENST00000384294 113 ntBASIC0.38□□□□□ -2.35
APOBEC1P41238 RNU6-863P-201ENST00000515989 104 ntBASIC0.38□□□□□ -2.35
APOBEC1P41238 RNU6-1006P-201ENST00000516998 103 ntBASIC0.38□□□□□ -2.35
APOBEC1P41238 RN7SL793P-201ENST00000583259 296 ntBASIC0.38□□□□□ -2.35
APOBEC1P41238 AL035470.1-201ENST00000622571 220 ntBASIC0.38□□□□□ -2.35
APOBEC1P41238 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.38□□□□□ -2.35
APOBEC1P41238 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 RNU6-1201P-201ENST00000384227 107 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 Y_RNA.563-201ENST00000384707 108 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 MIR936-201ENST00000401264 98 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 MIR548L-201ENST00000408303 86 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 RNU2-59P-201ENST00000410482 191 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 AL353813.1-201ENST00000440700 253 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 Y_RNA.809-201ENST00000516058 95 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 RNA5SP480-201ENST00000516840 109 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 AC096720.1-201ENST00000604441 183 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 MIR7107-201ENST00000611489 80 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 AL442128.1-201ENST00000615151 90 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 SNORD44.1-201ENST00000363202 61 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 SNORD114-23-201ENST00000363536 72 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 Y_RNA.353-201ENST00000365440 108 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 RNU6-1117P-201ENST00000384525 104 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 MIR548G-201ENST00000408442 89 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 RNU7-195P-201ENST00000458793 62 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 AC068339.1-201ENST00000526965 141 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 MIR3910-1-201ENST00000580936 111 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 AC132825.6-201ENST00000638861 357 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 Y_RNA.35-201ENST00000362601 101 ntBASIC0.35□□□□□ -2.35
APOBEC1P41238 RNA5SP403-201ENST00000363598 108 ntBASIC0.35□□□□□ -2.35
APOBEC1P41238 Y_RNA.221-201ENST00000364248 96 ntBASIC0.35□□□□□ -2.35
APOBEC1P41238 Y_RNA.549-201ENST00000384657 102 ntBASIC0.35□□□□□ -2.35
APOBEC1P41238 RNU7-104P-201ENST00000459398 79 ntBASIC0.35□□□□□ -2.35
APOBEC1P41238 RNU6-62P-201ENST00000516526 102 ntBASIC0.35□□□□□ -2.35
APOBEC1P41238 RNU7-161P-201ENST00000517289 62 ntBASIC0.35□□□□□ -2.35
APOBEC1P41238 AC067863.3-201ENST00000624172 122 ntBASIC0.35□□□□□ -2.35
APOBEC1P41238 RNU6-1260P-201ENST00000362944 107 ntBASIC0.34□□□□□ -2.36
APOBEC1P41238 Y_RNA.247-201ENST00000364500 92 ntBASIC0.34□□□□□ -2.36
APOBEC1P41238 Y_RNA.261-201ENST00000364631 102 ntBASIC0.34□□□□□ -2.36
APOBEC1P41238 RNU6-716P-201ENST00000365621 103 ntBASIC0.34□□□□□ -2.36
APOBEC1P41238 Y_RNA.377-201ENST00000365644 108 ntBASIC0.34□□□□□ -2.36
APOBEC1P41238 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.34□□□□□ -2.36
APOBEC1P41238 MIR4694-201ENST00000578534 80 ntBASIC0.34□□□□□ -2.36
APOBEC1P41238 SNORD114-26-201ENST00000363543 72 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 RNU6-726P-201ENST00000364680 107 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 RNU6-1126P-201ENST00000384002 107 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 SNORD116-21-201ENST00000384507 92 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 RNU6-880P-201ENST00000384526 107 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 RNU7-106P-201ENST00000459514 67 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 RNU6-412P-201ENST00000516434 106 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 MIR4711-201ENST00000578274 70 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 MIR5009-201ENST00000578736 100 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 AC243829.6-201ENST00000612652 106 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 AL365222.1-201ENST00000614661 98 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 Y_RNA.57-201ENST00000362806 113 ntBASIC0.32□□□□□ -2.36
APOBEC1P41238 U8.6-201ENST00000364939 135 ntBASIC0.32□□□□□ -2.36
APOBEC1P41238 RNU6-1327P-201ENST00000365302 105 ntBASIC0.32□□□□□ -2.36
APOBEC1P41238 MIR516A2-201ENST00000384888 90 ntBASIC0.32□□□□□ -2.36
APOBEC1P41238 MIR193B-201ENST00000384907 83 ntBASIC0.32□□□□□ -2.36
APOBEC1P41238 MIR516A1-201ENST00000385033 90 ntBASIC0.32□□□□□ -2.36
APOBEC1P41238 RNU6-1254P-201ENST00000391266 104 ntBASIC0.32□□□□□ -2.36
APOBEC1P41238 AC069271.1-201ENST00000445577 156 ntBASIC0.32□□□□□ -2.36
APOBEC1P41238 AC010487.4-201ENST00000637027 61 ntBASIC0.32□□□□□ -2.36
APOBEC1P41238 MIR103A1-201ENST00000362165 78 ntBASIC0.31□□□□□ -2.36
APOBEC1P41238 Y_RNA.173-201ENST00000363776 113 ntBASIC0.31□□□□□ -2.36
APOBEC1P41238 Y_RNA.281-201ENST00000364774 94 ntBASIC0.31□□□□□ -2.36
APOBEC1P41238 RNU6-22P-201ENST00000384355 107 ntBASIC0.31□□□□□ -2.36
APOBEC1P41238 MIR577-201ENST00000385196 96 ntBASIC0.31□□□□□ -2.36
APOBEC1P41238 RNU6-1168P-201ENST00000390831 104 ntBASIC0.31□□□□□ -2.36
APOBEC1P41238 RNU6-243P-201ENST00000391140 107 ntBASIC0.31□□□□□ -2.36
APOBEC1P41238 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.31□□□□□ -2.36
APOBEC1P41238 RNY3P2-201ENST00000362918 102 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 270.6 ms