Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.9□□□□□ -2.55
RFC3P40938 AL500527.2-201ENST00000454105 95 ntBASIC-0.9□□□□□ -2.55
RFC3P40938 MTND1P19-201ENST00000511780 315 ntBASIC-0.9□□□□□ -2.55
RFC3P40938 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.9□□□□□ -2.55
RFC3P40938 MIR6738-201ENST00000619620 64 ntBASIC-0.9□□□□□ -2.55
RFC3P40938 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.91□□□□□ -2.56
RFC3P40938 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.91□□□□□ -2.56
RFC3P40938 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.91□□□□□ -2.56
RFC3P40938 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.91□□□□□ -2.56
RFC3P40938 MIR9-2-201ENST00000384838 87 ntBASIC-0.91□□□□□ -2.56
RFC3P40938 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.91□□□□□ -2.56
RFC3P40938 RNU6-493P-201ENST00000391321 108 ntBASIC-0.91□□□□□ -2.56
RFC3P40938 MIR2113-201ENST00000459007 91 ntBASIC-0.91□□□□□ -2.56
RFC3P40938 AC021146.6-201ENST00000514659 117 ntBASIC-0.91□□□□□ -2.56
RFC3P40938 MIR3171-201ENST00000584270 74 ntBASIC-0.91□□□□□ -2.56
RFC3P40938 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.92□□□□□ -2.56
RFC3P40938 MT-TW-201ENST00000387382 68 ntBASIC-0.92□□□□□ -2.56
RFC3P40938 MT-TY-201ENST00000387409 66 ntBASIC-0.92□□□□□ -2.56
RFC3P40938 MIR1302-6-201ENST00000408466 90 ntBASIC-0.92□□□□□ -2.56
RFC3P40938 snoU13.11-201ENST00000459219 104 ntBASIC-0.92□□□□□ -2.56
RFC3P40938 RNU6-850P-201ENST00000516934 103 ntBASIC-0.92□□□□□ -2.56
RFC3P40938 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.93□□□□□ -2.56
RFC3P40938 RNU6-818P-201ENST00000364837 108 ntBASIC-0.93□□□□□ -2.56
RFC3P40938 RNY4P28-201ENST00000365281 93 ntBASIC-0.93□□□□□ -2.56
RFC3P40938 RNU6-901P-201ENST00000384593 106 ntBASIC-0.93□□□□□ -2.56
RFC3P40938 RNU6-768P-201ENST00000384683 107 ntBASIC-0.93□□□□□ -2.56
RFC3P40938 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.93□□□□□ -2.56
RFC3P40938 RNA5SP470-201ENST00000516463 106 ntBASIC-0.93□□□□□ -2.56
RFC3P40938 AP000676.1-201ENST00000533307 52 ntBASIC-0.93□□□□□ -2.56
RFC3P40938 AC020661.2-201ENST00000560114 134 ntBASIC-0.93□□□□□ -2.56
RFC3P40938 MIR4801-201ENST00000582704 82 ntBASIC-0.93□□□□□ -2.56
RFC3P40938 MIR8062-201ENST00000621515 85 ntBASIC-0.93□□□□□ -2.56
RFC3P40938 MIR409-201ENST00000362237 79 ntBASIC-0.94□□□□□ -2.56
RFC3P40938 SNORD114-25-201ENST00000363742 72 ntBASIC-0.94□□□□□ -2.56
RFC3P40938 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.94□□□□□ -2.56
RFC3P40938 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.94□□□□□ -2.56
RFC3P40938 RNU6-616P-201ENST00000384353 107 ntBASIC-0.94□□□□□ -2.56
RFC3P40938 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.94□□□□□ -2.56
RFC3P40938 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.94□□□□□ -2.56
RFC3P40938 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.94□□□□□ -2.56
RFC3P40938 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.94□□□□□ -2.56
RFC3P40938 MIR378F-201ENST00000578143 78 ntBASIC-0.94□□□□□ -2.56
RFC3P40938 MIR4499-201ENST00000584834 69 ntBASIC-0.94□□□□□ -2.56
RFC3P40938 AC087741.2-201ENST00000619415 172 ntBASIC-0.94□□□□□ -2.56
RFC3P40938 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.95□□□□□ -2.56
RFC3P40938 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.95□□□□□ -2.56
RFC3P40938 RNU6-10P-201ENST00000384036 107 ntBASIC-0.95□□□□□ -2.56
RFC3P40938 SNORA51.5-201ENST00000384126 131 ntBASIC-0.95□□□□□ -2.56
RFC3P40938 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.95□□□□□ -2.56
RFC3P40938 MIR516A2-201ENST00000384888 90 ntBASIC-0.95□□□□□ -2.56
RFC3P40938 MIR516A1-201ENST00000385033 90 ntBASIC-0.95□□□□□ -2.56
RFC3P40938 MIR4308-201ENST00000580634 81 ntBASIC-0.95□□□□□ -2.56
RFC3P40938 uc_338.19-201ENST00000616808 99 ntBASIC-0.95□□□□□ -2.56
RFC3P40938 MIR20A-201ENST00000362279 71 ntBASIC-0.96□□□□□ -2.56
RFC3P40938 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.96□□□□□ -2.56
RFC3P40938 SNORD56B-201ENST00000384713 71 ntBASIC-0.96□□□□□ -2.56
RFC3P40938 RNU6-287P-201ENST00000516230 98 ntBASIC-0.96□□□□□ -2.56
RFC3P40938 RNU6-881P-201ENST00000516813 102 ntBASIC-0.96□□□□□ -2.56
RFC3P40938 MIR3149-201ENST00000584629 83 ntBASIC-0.96□□□□□ -2.56
RFC3P40938 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.97□□□□□ -2.56
RFC3P40938 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.97□□□□□ -2.56
RFC3P40938 RNA5SP67-201ENST00000516422 131 ntBASIC-0.97□□□□□ -2.56
RFC3P40938 SNORD38.3-201ENST00000516599 73 ntBASIC-0.97□□□□□ -2.56
RFC3P40938 RNU6-86P-201ENST00000606534 107 ntBASIC-0.97□□□□□ -2.56
RFC3P40938 SNORA33.2-201ENST00000365413 134 ntBASIC-0.98□□□□□ -2.57
RFC3P40938 RNU6-639P-201ENST00000384074 107 ntBASIC-0.98□□□□□ -2.57
RFC3P40938 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.98□□□□□ -2.57
RFC3P40938 RNU6-900P-201ENST00000384498 102 ntBASIC-0.98□□□□□ -2.57
RFC3P40938 MIR34C-201ENST00000384831 77 ntBASIC-0.98□□□□□ -2.57
RFC3P40938 RNU6-274P-201ENST00000459566 107 ntBASIC-0.98□□□□□ -2.57
RFC3P40938 AC007012.1-201ENST00000567192 175 ntBASIC-0.98□□□□□ -2.57
RFC3P40938 MIR4280-201ENST00000582178 76 ntBASIC-0.98□□□□□ -2.57
RFC3P40938 U6.106-201ENST00000636360 105 ntBASIC-0.98□□□□□ -2.57
RFC3P40938 SNORD38.2-201ENST00000384470 69 ntBASIC-0.99□□□□□ -2.57
RFC3P40938 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.99□□□□□ -2.57
RFC3P40938 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.99□□□□□ -2.57
RFC3P40938 SNORA75.5-201ENST00000391291 81 ntBASIC-0.99□□□□□ -2.57
RFC3P40938 AC244090.1-201ENST00000441884 93 ntBASIC-0.99□□□□□ -2.57
RFC3P40938 SNORA13-201ENST00000458790 133 ntBASIC-0.99□□□□□ -2.57
RFC3P40938 RN7SKP19-201ENST00000516016 252 ntBASIC-0.99□□□□□ -2.57
RFC3P40938 RNU6-635P-201ENST00000516651 102 ntBASIC-0.99□□□□□ -2.57
RFC3P40938 Y_RNA.215-201ENST00000364204 112 ntBASIC-1□□□□□ -2.57
RFC3P40938 RNU4-36P-201ENST00000364294 144 ntBASIC-1□□□□□ -2.57
RFC3P40938 Y_RNA.447-201ENST00000384184 113 ntBASIC-1□□□□□ -2.57
RFC3P40938 RNU6-24P-201ENST00000384440 107 ntBASIC-1□□□□□ -2.57
RFC3P40938 RNU6-1104P-201ENST00000384723 104 ntBASIC-1□□□□□ -2.57
RFC3P40938 MIR587-201ENST00000384845 96 ntBASIC-1□□□□□ -2.57
RFC3P40938 Y_RNA.651-201ENST00000459380 103 ntBASIC-1□□□□□ -2.57
RFC3P40938 RNU6-1236P-201ENST00000517080 99 ntBASIC-1□□□□□ -2.57
RFC3P40938 TRDV1-202ENST00000621643 102 ntBASIC-1□□□□□ -2.57
RFC3P40938 RNY4P20-201ENST00000516678 93 ntBASIC-1.01□□□□□ -2.57
RFC3P40938 MIR6851-201ENST00000617060 67 ntBASIC-1.01□□□□□ -2.57
RFC3P40938 SNORD18B-201ENST00000365659 72 ntBASIC-1.02□□□□□ -2.57
RFC3P40938 MIR548H3-201ENST00000408771 118 ntBASIC-1.02□□□□□ -2.57
RFC3P40938 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.02□□□□□ -2.57
RFC3P40938 SNORD57-201ENST00000448188 72 ntBASIC-1.02□□□□□ -2.57
RFC3P40938 snoU13.13-201ENST00000458842 104 ntBASIC-1.02□□□□□ -2.57
RFC3P40938 MIR3115-201ENST00000577915 68 ntBASIC-1.02□□□□□ -2.57
RFC3P40938 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.02□□□□□ -2.57
RFC3P40938 RNU6-238P-201ENST00000363313 106 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms